RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 TP73-AS1Q9UF72 201 aa8.5□□□□□ -1.05
USB1-214ENST00000568848 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
USB1-214ENST00000568848 C11orf86A6NJI1 115 aa8.49□□□□□ -1.05
USB1-214ENST00000568848 ATP5LO75964 103 aa8.49□□□□□ -1.05
USB1-214ENST00000568848 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
USB1-214ENST00000568848 CRCT1Q9UGL9 99 aa8.48□□□□□ -1.05
USB1-214ENST00000568848 PFN2P35080 140 aa8.47□□□□□ -1.05
USB1-214ENST00000568848 IGKV2D-26A0A0A0MRZ7 120 aa8.46□□□□□ -1.06
USB1-214ENST00000568848 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.06
USB1-214ENST00000568848 FAM19A2Q8N3H0 131 aa8.46□□□□□ -1.06
USB1-214ENST00000568848 CHCHD1Q96BP2 118 aaKnown RBP8.46□□□□□ -1.06
USB1-214ENST00000568848 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
USB1-214ENST00000568848 TRGC2P03986 189 aa8.45□□□□□ -1.06
USB1-214ENST00000568848 FAM229BQ4G0N7 80 aa8.45□□□□□ -1.06
USB1-214ENST00000568848 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
USB1-214ENST00000568848 ZNF625Q96I27 306 aaPredicted RBP8.45□□□□□ -1.06
USB1-214ENST00000568848 FAM19A1Q7Z5A9 133 aa8.44□□□□□ -1.06
USB1-214ENST00000568848 Q8NDZ9 215 aa8.44□□□□□ -1.06
USB1-214ENST00000568848 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
USB1-214ENST00000568848 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
USB1-214ENST00000568848 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
USB1-214ENST00000568848 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
USB1-214ENST00000568848 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
USB1-214ENST00000568848 HSBP1O75506 76 aa8.41□□□□□ -1.06
USB1-214ENST00000568848 LINC01547P58512 204 aaPredicted RBP8.41□□□□□ -1.06
USB1-214ENST00000568848 DAND5Q8N907 189 aa8.41□□□□□ -1.06
USB1-214ENST00000568848 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
USB1-214ENST00000568848 LINC00310P59036 64 aa8.4□□□□□ -1.06
USB1-214ENST00000568848 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
USB1-214ENST00000568848 TMEM126AQ9H061 195 aa8.4□□□□□ -1.06
USB1-214ENST00000568848 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
USB1-214ENST00000568848 H0Y8G0 127 aa8.39□□□□□ -1.07
USB1-214ENST00000568848 M0R378 163 aa8.39□□□□□ -1.07
USB1-214ENST00000568848 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
USB1-214ENST00000568848 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
USB1-214ENST00000568848 COLCA2A8K830 154 aa8.38□□□□□ -1.07
USB1-214ENST00000568848 SERF1AO75920 110 aa8.38□□□□□ -1.07
USB1-214ENST00000568848 VPREB1P12018 145 aa8.37□□□□□ -1.07
USB1-214ENST00000568848 COX17Q14061 63 aa8.37□□□□□ -1.07
USB1-214ENST00000568848 ASB16-AS1Q495Z4 193 aa8.37□□□□□ -1.07
USB1-214ENST00000568848 HIGD2AQ9BW72 106 aa8.37□□□□□ -1.07
USB1-214ENST00000568848 LINC00158P58513 81 aa8.36□□□□□ -1.07
USB1-214ENST00000568848 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
USB1-214ENST00000568848 LEPROTL1O95214 131 aa8.35□□□□□ -1.07
USB1-214ENST00000568848 LCE2CQ5TA81 110 aa8.35□□□□□ -1.07
USB1-214ENST00000568848 FABP4P15090 132 aa8.34□□□□□ -1.07
USB1-214ENST00000568848 Q8NBF4 154 aa8.34□□□□□ -1.07
USB1-214ENST00000568848 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
USB1-214ENST00000568848 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
USB1-214ENST00000568848 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
USB1-214ENST00000568848 SPRR4Q96PI1 79 aa8.33□□□□□ -1.08
USB1-214ENST00000568848 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
USB1-214ENST00000568848 MEIG1Q5JSS6 88 aa8.31□□□□□ -1.08
USB1-214ENST00000568848 TSPEAR-AS2P59090 65 aa8.3□□□□□ -1.08
USB1-214ENST00000568848 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
USB1-214ENST00000568848 ATP6V1G1O75348 118 aa8.29□□□□□ -1.08
USB1-214ENST00000568848 FP248Q71RG6 208 aaPredicted RBP8.29□□□□□ -1.08
USB1-214ENST00000568848 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
USB1-214ENST00000568848 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
USB1-214ENST00000568848 LEPROTO15243 131 aa8.28□□□□□ -1.08
USB1-214ENST00000568848 HERV-K104P63124 156 aa8.28□□□□□ -1.08
USB1-214ENST00000568848 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
USB1-214ENST00000568848 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
USB1-214ENST00000568848 DPM2O94777 84 aa8.27□□□□□ -1.09
USB1-214ENST00000568848 BOD1L2Q8IYS8 172 aa8.27□□□□□ -1.09
USB1-214ENST00000568848 IGKCP01834 107 aa8.26□□□□□ -1.09
USB1-214ENST00000568848 PLNP26678 52 aa8.26□□□□□ -1.09
USB1-214ENST00000568848 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
USB1-214ENST00000568848 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
USB1-214ENST00000568848 NCR3O14931 201 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BKO60814 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BJP06899 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BOP23527 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BBP33778 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BDP58876 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 SEC61BP60468 96 aaKnown RBP8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BCP62807 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 MT1HP80294 61 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST2H2BEQ16778 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BHQ93079 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BNQ99877 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 HIST1H2BMQ99879 126 aa8.25□□□□□ -1.09
USB1-214ENST00000568848 J3QQQ9 107 aa8.24□□□□□ -1.09
USB1-214ENST00000568848 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
USB1-214ENST00000568848 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
USB1-214ENST00000568848 HERVK_113P61574 105 aa8.22□□□□□ -1.09
USB1-214ENST00000568848 SMCR5Q8TEV8 140 aa8.22□□□□□ -1.09
USB1-214ENST00000568848 IGLV9-49A0A0B4J1Y8 123 aa8.21□□□□□ -1.1
USB1-214ENST00000568848 LGALS3P17931 250 aaKnown RBP8.21□□□□□ -1.1
USB1-214ENST00000568848 CTAG1AP78358 180 aa8.21□□□□□ -1.1
USB1-214ENST00000568848 MOBPQ13875 183 aa8.21□□□□□ -1.1
USB1-214ENST00000568848 XP32Q5T750 250 aa8.21□□□□□ -1.1
USB1-214ENST00000568848 TRBV10-3A0A0K0K1G6 114 aa8.2□□□□□ -1.1
USB1-214ENST00000568848 Q8N377 158 aa8.2□□□□□ -1.1
USB1-214ENST00000568848 SYS1-DBNDD2H3BUS1 97 aa8.19□□□□□ -1.1
USB1-214ENST00000568848 ERC2-IT1O76042 136 aa8.19□□□□□ -1.1
USB1-214ENST00000568848 NMUP48645 174 aa8.19□□□□□ -1.1
USB1-214ENST00000568848 GAGE2AQ6NT46 116 aa8.19□□□□□ -1.1
USB1-214ENST00000568848 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms