RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 XAGE1AQ9HD64 81 aa5.8□□□□□ -1.48
SMPD3-207ENST00000566466 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
SMPD3-207ENST00000566466 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
SMPD3-207ENST00000566466 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 LGALS3P17931 250 aaKnown RBP5.79□□□□□ -1.48
SMPD3-207ENST00000566466 PFN2P35080 140 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 KRTAP10-4P60372 401 aaPredicted RBP5.79□□□□□ -1.48
SMPD3-207ENST00000566466 HERV-K104P63124 156 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 SFTA2Q6UW10 78 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 KRTAP11-1Q8IUC1 163 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
SMPD3-207ENST00000566466 ABCA13Q86UQ4 5058 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 A0A0U1RRA0 63 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 ZNF815PA8K554 130 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 AKR1D1P51857 326 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 DAND5Q8N907 189 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 SND1-IT1Q9HBX3 110 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 PAM16Q9Y3D7 125 aa5.78□□□□□ -1.48
SMPD3-207ENST00000566466 LOC107984156A0A0G2JMH3 177 aa5.77□□□□□ -1.49
SMPD3-207ENST00000566466 COX17Q14061 63 aa5.77□□□□□ -1.49
SMPD3-207ENST00000566466 ARL17AQ8IVW1 177 aa5.77□□□□□ -1.49
SMPD3-207ENST00000566466 BOD1L2Q8IYS8 172 aa5.77□□□□□ -1.49
SMPD3-207ENST00000566466 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
SMPD3-207ENST00000566466 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
SMPD3-207ENST00000566466 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
SMPD3-207ENST00000566466 TIMM17BO60830 172 aa5.76□□□□□ -1.49
SMPD3-207ENST00000566466 COX8AP10176 69 aa5.76□□□□□ -1.49
SMPD3-207ENST00000566466 VPREB1P12018 145 aa5.76□□□□□ -1.49
SMPD3-207ENST00000566466 SPATA45Q537H7 98 aa5.76□□□□□ -1.49
SMPD3-207ENST00000566466 C2orf91Q6ZV80 131 aa5.76□□□□□ -1.49
SMPD3-207ENST00000566466 MEIG1Q5JSS6 88 aa5.75□□□□□ -1.49
SMPD3-207ENST00000566466 VAMP8Q9BV40 100 aa5.75□□□□□ -1.49
SMPD3-207ENST00000566466 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
SMPD3-207ENST00000566466 PLA2G2DQ9UNK4 145 aa5.75□□□□□ -1.49
SMPD3-207ENST00000566466 DLEU1O43261 78 aa5.74□□□□□ -1.49
SMPD3-207ENST00000566466 LINC00158P58513 81 aa5.74□□□□□ -1.49
SMPD3-207ENST00000566466 PHF5AQ7RTV0 110 aaKnown RBP5.74□□□□□ -1.49
SMPD3-207ENST00000566466 FAM19A5Q7Z5A7 132 aaPredicted RBP5.74□□□□□ -1.49
SMPD3-207ENST00000566466 C14orf144Q96I85 54 aa5.74□□□□□ -1.49
SMPD3-207ENST00000566466 LINC00474Q9P2X8 69 aa5.74□□□□□ -1.49
SMPD3-207ENST00000566466 PKIGQ9Y2B9 76 aa5.74□□□□□ -1.49
SMPD3-207ENST00000566466 SMIM6P0DI80 62 aa5.73□□□□□ -1.49
SMPD3-207ENST00000566466 SPANXDQ9BXN6 97 aa5.73□□□□□ -1.49
SMPD3-207ENST00000566466 SPANXCQ9NY87 97 aa5.73□□□□□ -1.49
SMPD3-207ENST00000566466 HSBP1L1C9JCN9 74 aa5.72□□□□□ -1.49
SMPD3-207ENST00000566466 SMR3BP02814 79 aaPredicted RBP5.72□□□□□ -1.49
SMPD3-207ENST00000566466 NPC2P61916 151 aa5.72□□□□□ -1.49
SMPD3-207ENST00000566466 PRR3P79522 188 aaKnown RBP5.72□□□□□ -1.49
SMPD3-207ENST00000566466 LINC00308Q8TCZ7 52 aa5.72□□□□□ -1.49
SMPD3-207ENST00000566466 C22orf24Q9Y442 160 aa5.72□□□□□ -1.49
SMPD3-207ENST00000566466 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
SMPD3-207ENST00000566466 M0QXV9 152 aa5.71□□□□□ -1.5
SMPD3-207ENST00000566466 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
SMPD3-207ENST00000566466 C7orf33Q8WU49 177 aa5.71□□□□□ -1.5
SMPD3-207ENST00000566466 SPANXB1Q9NS25 103 aaPredicted RBP5.71□□□□□ -1.5
SMPD3-207ENST00000566466 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
SMPD3-207ENST00000566466 LINC00587B1AMM8 73 aa5.7□□□□□ -1.5
SMPD3-207ENST00000566466 HNRNPA3P51991 378 aaKnown RBP5.7□□□□□ -1.5
SMPD3-207ENST00000566466 Q8N1X5 172 aa5.7□□□□□ -1.5
SMPD3-207ENST00000566466 PPDPFQ9H3Y8 114 aa5.7□□□□□ -1.5
SMPD3-207ENST00000566466 SCGB1D4Q6XE38 83 aa5.69□□□□□ -1.5
SMPD3-207ENST00000566466 LINC00167Q96N53 147 aa5.69□□□□□ -1.5
SMPD3-207ENST00000566466 TMEM238C9JI98 176 aa5.68□□□□□ -1.5
SMPD3-207ENST00000566466 NDUFC2O95298 119 aa5.68□□□□□ -1.5
SMPD3-207ENST00000566466 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
SMPD3-207ENST00000566466 MRPL55Q7Z7F7 128 aaKnown RBP5.68□□□□□ -1.5
SMPD3-207ENST00000566466 MUSTN1Q8IVN3 82 aa5.68□□□□□ -1.5
SMPD3-207ENST00000566466 HIGD1BQ9P298 99 aa5.68□□□□□ -1.5
SMPD3-207ENST00000566466 GAGE10A6NGK3 116 aa5.67□□□□□ -1.5
SMPD3-207ENST00000566466 NCR3O14931 201 aa5.67□□□□□ -1.5
SMPD3-207ENST00000566466 Q5VSD8 79 aa5.67□□□□□ -1.5
SMPD3-207ENST00000566466 LINC00518Q8N0U6 118 aa5.67□□□□□ -1.5
SMPD3-207ENST00000566466 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
SMPD3-207ENST00000566466 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
SMPD3-207ENST00000566466 IGLV1-50A0A075B6I6 118 aa5.66□□□□□ -1.5
SMPD3-207ENST00000566466 IGLV6-57P01721 117 aa5.66□□□□□ -1.5
SMPD3-207ENST00000566466 IFITM1P13164 125 aa5.66□□□□□ -1.5
SMPD3-207ENST00000566466 Q6ZVH6 145 aa5.66□□□□□ -1.5
SMPD3-207ENST00000566466 C12orf57Q99622 126 aa5.66□□□□□ -1.5
SMPD3-207ENST00000566466 PRO1933Q9H354 126 aa5.66□□□□□ -1.5
SMPD3-207ENST00000566466 TRBV10-3A0A0K0K1G6 114 aa5.65□□□□□ -1.5
SMPD3-207ENST00000566466 TRBV10-2A0A0K0K1G8 114 aa5.65□□□□□ -1.5
SMPD3-207ENST00000566466 RPL37AP8A6NKH3 93 aa5.65□□□□□ -1.5
SMPD3-207ENST00000566466 KRTAP4-16G5E9R7 235 aaPredicted RBP5.65□□□□□ -1.5
SMPD3-207ENST00000566466 M0R378 163 aa5.65□□□□□ -1.5
SMPD3-207ENST00000566466 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.5
SMPD3-207ENST00000566466 DPH3Q96FX2 82 aa5.65□□□□□ -1.5
SMPD3-207ENST00000566466 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
SMPD3-207ENST00000566466 A4D1N5 150 aa5.64□□□□□ -1.51
SMPD3-207ENST00000566466 SPRR1AP35321 89 aa5.64□□□□□ -1.51
SMPD3-207ENST00000566466 RPL37AP61513 92 aaKnown RBP5.64□□□□□ -1.51
SMPD3-207ENST00000566466 RPL24P83731 157 aaKnown RBP5.64□□□□□ -1.51
SMPD3-207ENST00000566466 UQCR10Q9UDW1 63 aa5.64□□□□□ -1.51
SMPD3-207ENST00000566466 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
SMPD3-207ENST00000566466 FXYD2P54710 66 aa5.63□□□□□ -1.51
SMPD3-207ENST00000566466 S100A12P80511 92 aa5.63□□□□□ -1.51
SMPD3-207ENST00000566466 SRSF9Q13242 221 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMPD3-207ENST00000566466 NKAPP1Q8N9T2 125 aa5.63□□□□□ -1.51
SMPD3-207ENST00000566466 KCNQ1DNQ9H478 68 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 205 ms