RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 LINC00242Q5T6M2 205 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 MAP6D1Q9H9H5 199 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 PRAC1Q96KF2 57 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 Q8IZM0 81 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 DOPEY1Q5JWR5 2465 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 LOC110117498A0A087WWA1 95 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 PATE3B3GLJ2 98 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 ZFYVE26Q68DK2 2539 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 TLN1Q9Y490 2541 aaKnown RBP2.04□□□□□ -2.08
CHD9-218ENST00000566029 LYNX1G3V0Z9 82 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 Q8N9W7 124 aa2.04□□□□□ -2.08
CHD9-218ENST00000566029 SMIM11BQ8TCY0 68 aa2.03□□□□□ -2.08
CHD9-218ENST00000566029 TLN2Q9Y4G6 2542 aa2.03□□□□□ -2.08
CHD9-218ENST00000566029 CR1P17927 2039 aa2.03□□□□□ -2.08
CHD9-218ENST00000566029 Q6ZTC4 211 aa2.03□□□□□ -2.08
CHD9-218ENST00000566029 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
CHD9-218ENST00000566029 UNQ9165/PRO28630Q6UXU0 137 aa2.03□□□□□ -2.08
CHD9-218ENST00000566029 IGLV6-57P01721 117 aa2.03□□□□□ -2.09
CHD9-218ENST00000566029 LINC01560Q8TB33 94 aa2.03□□□□□ -2.09
CHD9-218ENST00000566029 MAP1AP78559 2803 aaPredicted RBP2.03□□□□□ -2.09
CHD9-218ENST00000566029 IGKV2D-24A0A075B6R9 120 aa2.03□□□□□ -2.09
CHD9-218ENST00000566029 SPINK1P00995 79 aa2.03□□□□□ -2.09
CHD9-218ENST00000566029 LELP1Q5T871 98 aa2.03□□□□□ -2.09
CHD9-218ENST00000566029 Q6ZRP5 223 aa2.03□□□□□ -2.09
CHD9-218ENST00000566029 E7EQL1 145 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 M0R2N4 97 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 A6NDX4 124 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 MOBPQ13875 183 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 Q6ZSN1 163 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 A0A096LNI7 61 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 TRBV7-4A0A0J9YYF1 115 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 K7EQG2 157 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 LINC01547P58512 204 aaPredicted RBP2.02□□□□□ -2.09
CHD9-218ENST00000566029 COX6A2Q02221 97 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 Q6YL49 198 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 Q8N3U1 123 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 G3V318 75 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 LINC00575Q6W349 94 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 LOC101927531A0A1B0GV80 90 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 Q9BRP9 147 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 FAM229AH3BQW9 127 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 LMO4P61968 165 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 DEFB136Q30KP8 78 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 EP400Q96L91 3159 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 CEP295Q9C0D2 2601 aa2.02□□□□□ -2.09
CHD9-218ENST00000566029 LCE6AA0A183 80 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 KRTAP23-1A1A580 65 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 COX7BP24311 80 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 SMIM29Q86T20 159 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 M0R378 163 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 LINC01554Q52M75 96 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 PRLHP81277 87 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 EGFEM1PQ0D2K5 195 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 C9orf116Q5BN46 136 aaPredicted RBP2.01□□□□□ -2.09
CHD9-218ENST00000566029 H0Y9P7 68 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 LINC00588Q9Y4M8 146 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 TM2D3Q9BRN9 247 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 A0A087WSZ3 146 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
CHD9-218ENST00000566029 DEFB130BP0DP73 79 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 DEFB130AP0DP74 79 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 ACYP2P14621 99 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 PROK1P58294 105 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 PRR26Q8N8Z3 221 aa2.01□□□□□ -2.09
CHD9-218ENST00000566029 A0A096LNT2 108 aa2□□□□□ -2.09
CHD9-218ENST00000566029 TRBV6-8A0A0A6YYG3 113 aa2□□□□□ -2.09
CHD9-218ENST00000566029 FAM229BQ4G0N7 80 aa2□□□□□ -2.09
CHD9-218ENST00000566029 Q6ZQT0 140 aa2□□□□□ -2.09
CHD9-218ENST00000566029 PLA2G2DQ9UNK4 145 aa2□□□□□ -2.09
CHD9-218ENST00000566029 PRRC2CQ9Y520 2896 aaKnown RBP2□□□□□ -2.09
CHD9-218ENST00000566029 RPS29P62273 56 aaKnown RBP2□□□□□ -2.09
CHD9-218ENST00000566029 ANGP03950 147 aaKnown RBP2□□□□□ -2.09
CHD9-218ENST00000566029 TRAV22A0A0B4J277 110 aa2□□□□□ -2.09
CHD9-218ENST00000566029 ANAPC11Q9NYG5 84 aa2□□□□□ -2.09
CHD9-218ENST00000566029 A0A1B0GU69 56 aa2□□□□□ -2.09
CHD9-218ENST00000566029 NTM-AS1Q6ZSK4 140 aa2□□□□□ -2.09
CHD9-218ENST00000566029 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 Q6ZTI0 123 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 C2CD3Q4AC94 2353 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 Q75L30 129 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 PRR3P79522 188 aaKnown RBP1.99□□□□□ -2.09
CHD9-218ENST00000566029 A6NN06 94 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 LINC00483Q53H64 154 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 BBC3Q96PG8 261 aaPredicted RBP1.99□□□□□ -2.09
CHD9-218ENST00000566029 LINC00313P59037 77 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.99□□□□□ -2.09
CHD9-218ENST00000566029 C1orf134Q5TEV5 83 aa1.99□□□□□ -2.09
CHD9-218ENST00000566029 ZFP36P26651 326 aaKnown RBP1.98□□□□□ -2.09
CHD9-218ENST00000566029 ABCA12Q86UK0 2595 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 C1orf137Q5JT78 98 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 Q8N814 137 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 HRES1P13985 223 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 GVQW2A0A096LPI5 108 aaPredicted RBP1.98□□□□□ -2.09
CHD9-218ENST00000566029 CDC42SE2Q9NRR3 84 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 WWC2-AS2Q96NR7 200 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 MT3P25713 68 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 KLK12Q9UKR0 248 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 ZNF462Q96JM2 2506 aa1.98□□□□□ -2.09
CHD9-218ENST00000566029 GCN1Q92616 2671 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms