RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 A0A087WYN8 130 aa12.69□□□□□ -0.38
SMPD3-203ENST00000563226 CAMK2N2Q96S95 79 aa12.69□□□□□ -0.38
SMPD3-203ENST00000563226 Q6ZRU5 148 aa12.67□□□□□ -0.38
SMPD3-203ENST00000563226 MUC7Q8TAX7 377 aa12.66□□□□□ -0.38
SMPD3-203ENST00000563226 CDIP1Q9H305 208 aa12.66□□□□□ -0.38
SMPD3-203ENST00000563226 STAB2Q8WWQ8 2551 aa12.66□□□□□ -0.38
SMPD3-203ENST00000563226 XAGE1AQ9HD64 81 aa12.66□□□□□ -0.38
SMPD3-203ENST00000563226 LYSTQ99698 3801 aa12.65□□□□□ -0.38
SMPD3-203ENST00000563226 C22orf24Q9Y442 160 aa12.65□□□□□ -0.39
SMPD3-203ENST00000563226 H0YGX0 51 aa12.64□□□□□ -0.39
SMPD3-203ENST00000563226 DYNC2H1Q8NCM8 4307 aaKnown RBP12.64□□□□□ -0.39
SMPD3-203ENST00000563226 BAALC-AS2P0C853 105 aa12.63□□□□□ -0.39
SMPD3-203ENST00000563226 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
SMPD3-203ENST00000563226 C2orf48Q96LS8 159 aa12.63□□□□□ -0.39
SMPD3-203ENST00000563226 LECT2O14960 151 aa12.61□□□□□ -0.39
SMPD3-203ENST00000563226 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
SMPD3-203ENST00000563226 PCP4P48539 62 aa12.61□□□□□ -0.39
SMPD3-203ENST00000563226 RPL18AQ02543 176 aaKnown RBP12.61□□□□□ -0.39
SMPD3-203ENST00000563226 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
SMPD3-203ENST00000563226 B9D2Q9BPU9 175 aa12.6□□□□□ -0.39
SMPD3-203ENST00000563226 SIGMAR1Q99720 223 aa12.59□□□□□ -0.39
SMPD3-203ENST00000563226 DNAL4O96015 105 aa12.58□□□□□ -0.39
SMPD3-203ENST00000563226 UPK3BQ9BT76 320 aa12.58□□□□□ -0.39
SMPD3-203ENST00000563226 DNAH10Q8IVF4 4471 aa12.58□□□□□ -0.4
SMPD3-203ENST00000563226 SLPIP03973 132 aa12.57□□□□□ -0.4
SMPD3-203ENST00000563226 C6orf99Q4VX62 202 aa12.57□□□□□ -0.4
SMPD3-203ENST00000563226 NDUFC2-KCTD14E9PQ53 114 aa12.56□□□□□ -0.4
SMPD3-203ENST00000563226 IGLV6-57P01721 117 aa12.56□□□□□ -0.4
SMPD3-203ENST00000563226 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
SMPD3-203ENST00000563226 C21orf62-AS1Q17RA5 79 aa12.56□□□□□ -0.4
SMPD3-203ENST00000563226 GAGE2EQ4V326 116 aa12.55□□□□□ -0.4
SMPD3-203ENST00000563226 GAGE2DQ9UEU5 116 aa12.55□□□□□ -0.4
SMPD3-203ENST00000563226 PLECQ15149 4684 aaKnown RBP12.55□□□□□ -0.4
SMPD3-203ENST00000563226 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
SMPD3-203ENST00000563226 XGP55808 180 aa12.55□□□□□ -0.4
SMPD3-203ENST00000563226 Q6ZRP5 223 aa12.55□□□□□ -0.4
SMPD3-203ENST00000563226 TRBV10-3A0A0K0K1G6 114 aa12.53□□□□□ -0.4
SMPD3-203ENST00000563226 USP17L23D6RBM5 183 aa12.53□□□□□ -0.4
SMPD3-203ENST00000563226 VPREB1P12018 145 aa12.53□□□□□ -0.4
SMPD3-203ENST00000563226 DNHD1Q96M86 4753 aa12.53□□□□□ -0.4
SMPD3-203ENST00000563226 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
SMPD3-203ENST00000563226 PRKDCP78527 4128 aaKnown RBP12.52□□□□□ -0.4
SMPD3-203ENST00000563226 F8WDY8 70 aa12.52□□□□□ -0.41
SMPD3-203ENST00000563226 MT-ATP8P03928 68 aa12.52□□□□□ -0.41
SMPD3-203ENST00000563226 Q8N814 137 aa12.51□□□□□ -0.41
SMPD3-203ENST00000563226 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
SMPD3-203ENST00000563226 APLNQ9ULZ1 77 aa12.51□□□□□ -0.41
SMPD3-203ENST00000563226 DNAH7Q8WXX0 4024 aa12.51□□□□□ -0.41
SMPD3-203ENST00000563226 LINC00167Q96N53 147 aa12.5□□□□□ -0.41
SMPD3-203ENST00000563226 RMI2Q96E14 147 aa12.49□□□□□ -0.41
SMPD3-203ENST00000563226 TRAV23DV6A0A075B6W5 121 aa12.47□□□□□ -0.41
SMPD3-203ENST00000563226 A0A1B0GX51 115 aa12.47□□□□□ -0.41
SMPD3-203ENST00000563226 ORMDL1Q9P0S3 153 aa12.47□□□□□ -0.41
SMPD3-203ENST00000563226 LINC00575Q6W349 94 aa12.46□□□□□ -0.41
SMPD3-203ENST00000563226 M0R378 163 aa12.44□□□□□ -0.42
SMPD3-203ENST00000563226 UBE2DNLQ8IWF7 75 aa12.44□□□□□ -0.42
SMPD3-203ENST00000563226 FAM240AA0A1B0GVK7 77 aa12.44□□□□□ -0.42
SMPD3-203ENST00000563226 A0A1B0GV72 72 aa12.43□□□□□ -0.42
SMPD3-203ENST00000563226 SERTAD4-AS1Q5TG53 156 aa12.43□□□□□ -0.42
SMPD3-203ENST00000563226 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
SMPD3-203ENST00000563226 DIRC1Q969H9 104 aa12.42□□□□□ -0.42
SMPD3-203ENST00000563226 OBSCN-AS1Q96MR7 158 aa12.42□□□□□ -0.42
SMPD3-203ENST00000563226 ZNF73O43830 326 aaPredicted RBP12.42□□□□□ -0.42
SMPD3-203ENST00000563226 TLX1NBP0CAT3 122 aa12.42□□□□□ -0.42
SMPD3-203ENST00000563226 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
SMPD3-203ENST00000563226 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
SMPD3-203ENST00000563226 C14orf132Q9NPU4 83 aa12.41□□□□□ -0.42
SMPD3-203ENST00000563226 hADV29S1A0JD25 119 aa12.41□□□□□ -0.42
SMPD3-203ENST00000563226 NHLRC4P0CG21 123 aaPredicted RBP12.39□□□□□ -0.43
SMPD3-203ENST00000563226 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
SMPD3-203ENST00000563226 FAM168BA1KXE4 195 aa12.38□□□□□ -0.43
SMPD3-203ENST00000563226 SCGB1A1P11684 91 aa12.38□□□□□ -0.43
SMPD3-203ENST00000563226 GAGE2AQ6NT46 116 aa12.37□□□□□ -0.43
SMPD3-203ENST00000563226 MEGF8Q7Z7M0 2845 aa12.36□□□□□ -0.43
SMPD3-203ENST00000563226 COX7BP24311 80 aa12.36□□□□□ -0.43
SMPD3-203ENST00000563226 VPS13DQ5THJ4 4388 aa12.36□□□□□ -0.43
SMPD3-203ENST00000563226 TMEM256-PLSCR3K7ERE1 68 aa12.36□□□□□ -0.43
SMPD3-203ENST00000563226 SNCGO76070 127 aa12.36□□□□□ -0.43
SMPD3-203ENST00000563226 ELOF1P60002 83 aaKnown RBP12.36□□□□□ -0.43
SMPD3-203ENST00000563226 GAGE2BQ13066 116 aa12.35□□□□□ -0.43
SMPD3-203ENST00000563226 NKAPP1Q8N9T2 125 aa12.35□□□□□ -0.43
SMPD3-203ENST00000563226 SMCR5Q8TEV8 140 aa12.35□□□□□ -0.43
SMPD3-203ENST00000563226 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
SMPD3-203ENST00000563226 NUPR2A6NF83 97 aa12.34□□□□□ -0.43
SMPD3-203ENST00000563226 ACYP1P07311 99 aa12.34□□□□□ -0.43
SMPD3-203ENST00000563226 Q6ZQY7 126 aa12.34□□□□□ -0.43
SMPD3-203ENST00000563226 KRTAP7-1Q8IUC3 87 aa12.34□□□□□ -0.43
SMPD3-203ENST00000563226 PLA2G2DQ9UNK4 145 aa12.33□□□□□ -0.44
SMPD3-203ENST00000563226 TRBV7-6A0A0J9YX20 115 aa12.32□□□□□ -0.44
SMPD3-203ENST00000563226 PSCAO43653 123 aa12.32□□□□□ -0.44
SMPD3-203ENST00000563226 LOC107984640A0A0U1RRK4 108 aa12.3□□□□□ -0.44
SMPD3-203ENST00000563226 LINC00528Q8N1L1 170 aa12.3□□□□□ -0.44
SMPD3-203ENST00000563226 KCNQ1DNQ9H478 68 aa12.29□□□□□ -0.44
SMPD3-203ENST00000563226 IGLV5-37A0A075B6J1 123 aa12.28□□□□□ -0.44
SMPD3-203ENST00000563226 RPL37AP8A6NKH3 93 aa12.28□□□□□ -0.44
SMPD3-203ENST00000563226 JMJD7-PLA2G4BH0Y9G9 81 aa12.28□□□□□ -0.44
SMPD3-203ENST00000563226 SDIM1Q6ZPB5 146 aa12.28□□□□□ -0.44
SMPD3-203ENST00000563226 FAM19A5Q7Z5A7 132 aaPredicted RBP12.28□□□□□ -0.44
SMPD3-203ENST00000563226 NBDYA0A0U1RRE5 68 aa12.26□□□□□ -0.45
SMPD3-203ENST00000563226 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms