RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	FUS	P35637	526 aa	Known RBP eCLIP	6.33	□□□□□ -1.4
KNSTRN-215	ENST00000561367	RPL18A	Q02543	176 aa	Known RBP	6.33	□□□□□ -1.4
KNSTRN-215	ENST00000561367	LINC01620	Q4KN68	170 aa		6.33	□□□□□ -1.4
KNSTRN-215	ENST00000561367	SPACA4	Q8TDM5	124 aa		6.33	□□□□□ -1.4
KNSTRN-215	ENST00000561367		Q6ZRP5	223 aa		6.32	□□□□□ -1.4
KNSTRN-215	ENST00000561367	ATOH7	Q8N100	152 aa		6.32	□□□□□ -1.4
KNSTRN-215	ENST00000561367		A0A096LNI7	61 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	TSPEAR-AS2	P59090	65 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	GAGE2B	Q13066	116 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	C9orf116	Q5BN46	136 aa	Predicted RBP	6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	MEIG1	Q5JSS6	88 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	DPH3	Q96FX2	82 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	DNAH11	Q96DT5	4516 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	PKHD1	P08F94	4074 aa		6.31	□□□□□ -1.4
KNSTRN-215	ENST00000561367	IGKV2D-26	A0A0A0MRZ7	120 aa		6.3	□□□□□ -1.4
KNSTRN-215	ENST00000561367	IGKV2-24	A0A0C4DH68	120 aa		6.3	□□□□□ -1.4
KNSTRN-215	ENST00000561367	ZNF815P	A8K554	130 aa		6.3	□□□□□ -1.4
KNSTRN-215	ENST00000561367	TIMM17B	O60830	172 aa		6.3	□□□□□ -1.4
KNSTRN-215	ENST00000561367	VAMP8	Q9BV40	100 aa		6.3	□□□□□ -1.4
KNSTRN-215	ENST00000561367	PLAC8	Q9NZF1	115 aa		6.3	□□□□□ -1.4
KNSTRN-215	ENST00000561367	EPM2A	B3EWF7	344 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367	PFN2	P35080	140 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367	LINC00158	P58513	81 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367	GAGE2E	Q4V326	116 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367	PYY3	Q5JQD4	70 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367	FAM30A	Q9NZY2	134 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367	GAGE2D	Q9UEU5	116 aa		6.29	□□□□□ -1.4
KNSTRN-215	ENST00000561367		A0A087WYN8	130 aa		6.28	□□□□□ -1.4
KNSTRN-215	ENST00000561367		A0A0J9YXY3	114 aa		6.28	□□□□□ -1.4
KNSTRN-215	ENST00000561367	SCGB1D4	Q6XE38	83 aa		6.28	□□□□□ -1.4
KNSTRN-215	ENST00000561367		Q6ZVH6	145 aa		6.28	□□□□□ -1.4
KNSTRN-215	ENST00000561367	CIRBP-AS1	Q8TBR5	109 aa		6.28	□□□□□ -1.4
KNSTRN-215	ENST00000561367	COPS9	Q8WXC6	57 aa		6.28	□□□□□ -1.4
KNSTRN-215	ENST00000561367	LOC107984156	A0A0G2JMH3	177 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367		A0A1B0GV72	72 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	DLEU1	O43261	78 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	CHTF8	P0CG12	524 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SMIM13	P0DJ93	91 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	XG	P55808	180 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	RPL24	P83731	157 aa	Known RBP	6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SCX	Q7RTU7	201 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	ARL17A	Q8IVW1	177 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	PPDPF	Q9H3Y8	114 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SND1-IT1	Q9HBX3	110 aa		6.27	□□□□□ -1.41
KNSTRN-215	ENST00000561367	PANO1	I0J062	215 aa		6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	COX8A	P10176	69 aa		6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	C9orf129	Q5T035	196 aa	Known RBP	6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	MIR7-3HG	Q8N6C7	128 aa		6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	C14orf144	Q96I85	54 aa		6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	MIEN1	Q9BRT3	115 aa		6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	TP73-AS1	Q9UF72	201 aa		6.26	□□□□□ -1.41
KNSTRN-215	ENST00000561367	IGLV5-37	A0A075B6J1	123 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SPATA45	Q537H7	98 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	PCP2	Q8IVA1	136 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	BOD1L2	Q8IYS8	172 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	C7orf33	Q8WU49	177 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	XAGE1A	Q9HD64	81 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	PAM16	Q9Y3D7	125 aa		6.25	□□□□□ -1.41
KNSTRN-215	ENST00000561367	IFITM1	P13164	125 aa		6.24	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SPANXD	Q9BXN6	97 aa		6.24	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SPANXC	Q9NY87	97 aa		6.24	□□□□□ -1.41
KNSTRN-215	ENST00000561367	DNAH5	Q8TE73	4624 aa		6.24	□□□□□ -1.41
KNSTRN-215	ENST00000561367		A0A0U1RRA0	63 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367		A0A1W2PNN7	141 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	NDUFC2	O95298	119 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	C5orf47	Q569G3	176 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SLC25A34	Q6PIV7	304 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	NKAPP1	Q8N9T2	125 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	LITAF	Q99732	161 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	TTTY13	Q9BZ97	58 aa		6.23	□□□□□ -1.41
KNSTRN-215	ENST00000561367	EPPK1	P58107	5090 aa	Known RBP	6.22	□□□□□ -1.41
KNSTRN-215	ENST00000561367		M0QXV9	152 aa		6.22	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.22	□□□□□ -1.41
KNSTRN-215	ENST00000561367	LRP1B	Q9NZR2	4599 aa		6.21	□□□□□ -1.41
KNSTRN-215	ENST00000561367	SCGB1A1	P11684	91 aa		6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	VPREB1	P12018	145 aa		6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	ADAMTSL4-AS1	Q5T5F5	129 aa		6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	MRPL55	Q7Z7F7	128 aa	Known RBP	6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	HIGD1B	Q9P298	99 aa		6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	C22orf24	Q9Y442	160 aa		6.21	□□□□□ -1.42
KNSTRN-215	ENST00000561367	DYNC1H1	Q14204	4646 aa	Known RBP	6.2	□□□□□ -1.42
KNSTRN-215	ENST00000561367	TRBV10-2	A0A0K0K1G8	114 aa		6.2	□□□□□ -1.42
KNSTRN-215	ENST00000561367	FAM168B	A1KXE4	195 aa		6.2	□□□□□ -1.42
KNSTRN-215	ENST00000561367	SERTAD4-AS1	Q5TG53	156 aa		6.2	□□□□□ -1.42
KNSTRN-215	ENST00000561367	DAND5	Q8N907	189 aa		6.2	□□□□□ -1.42
KNSTRN-215	ENST00000561367	LINC00308	Q8TCZ7	52 aa		6.2	□□□□□ -1.42
KNSTRN-215	ENST00000561367		M0R378	163 aa		6.19	□□□□□ -1.42
KNSTRN-215	ENST00000561367	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.19	□□□□□ -1.42
KNSTRN-215	ENST00000561367	KRTAP5-3	Q6L8H2	238 aa		6.19	□□□□□ -1.42
KNSTRN-215	ENST00000561367	KRTAP7-1	Q8IUC3	87 aa		6.19	□□□□□ -1.42
KNSTRN-215	ENST00000561367	UBE2B	P63146	152 aa		6.18	□□□□□ -1.42
KNSTRN-215	ENST00000561367	UQCR10	Q9UDW1	63 aa		6.18	□□□□□ -1.42
KNSTRN-215	ENST00000561367	HAMP	P81172	84 aa		6.17	□□□□□ -1.42
KNSTRN-215	ENST00000561367	TAL2	Q16559	108 aa		6.17	□□□□□ -1.42
KNSTRN-215	ENST00000561367	PHF5A	Q7RTV0	110 aa	Known RBP	6.17	□□□□□ -1.42
KNSTRN-215	ENST00000561367	LINC00167	Q96N53	147 aa		6.17	□□□□□ -1.42
KNSTRN-215	ENST00000561367	TSTD3	H0UI37	97 aa		6.16	□□□□□ -1.42
KNSTRN-215	ENST00000561367	SMR3B	P02814	79 aa	Predicted RBP	6.16	□□□□□ -1.42
KNSTRN-215	ENST00000561367	RPL37A	P61513	92 aa	Known RBP	6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms