RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	LITAF	Q99732	161 aa		7.1	□□□□□ -1.27
CERS3-208	ENST00000560944	SND1-IT1	Q9HBX3	110 aa		7.1	□□□□□ -1.27
CERS3-208	ENST00000560944	SOSTDC1	Q6X4U4	206 aa		7.09	□□□□□ -1.27
CERS3-208	ENST00000560944	DPH3	Q96FX2	82 aa		7.09	□□□□□ -1.27
CERS3-208	ENST00000560944	VAMP8	Q9BV40	100 aa		7.09	□□□□□ -1.27
CERS3-208	ENST00000560944	HSBP1L1	C9JCN9	74 aa		7.08	□□□□□ -1.28
CERS3-208	ENST00000560944	HERV-K104	P63124	156 aa		7.08	□□□□□ -1.28
CERS3-208	ENST00000560944	PHF5A	Q7RTV0	110 aa	Known RBP	7.08	□□□□□ -1.28
CERS3-208	ENST00000560944	KRTAP11-1	Q8IUC1	163 aa		7.08	□□□□□ -1.28
CERS3-208	ENST00000560944	C14orf144	Q96I85	54 aa		7.08	□□□□□ -1.28
CERS3-208	ENST00000560944	PLAC8	Q9NZF1	115 aa		7.08	□□□□□ -1.28
CERS3-208	ENST00000560944	CDK2AP2	O75956	126 aa		7.07	□□□□□ -1.28
CERS3-208	ENST00000560944	LCE2B	O14633	110 aa		7.06	□□□□□ -1.28
CERS3-208	ENST00000560944	PRR3	P79522	188 aa	Known RBP	7.06	□□□□□ -1.28
CERS3-208	ENST00000560944	GAGE10	A6NGK3	116 aa		7.05	□□□□□ -1.28
CERS3-208	ENST00000560944	SFTA2	Q6UW10	78 aa		7.05	□□□□□ -1.28
CERS3-208	ENST00000560944	KRTAP4-5	Q9BYR2	181 aa		7.05	□□□□□ -1.28
CERS3-208	ENST00000560944		M0QXV9	152 aa		7.04	□□□□□ -1.28
CERS3-208	ENST00000560944	NCR3	O14931	201 aa		7.04	□□□□□ -1.28
CERS3-208	ENST00000560944	COX8A	P10176	69 aa		7.04	□□□□□ -1.28
CERS3-208	ENST00000560944	VPREB1	P12018	145 aa		7.04	□□□□□ -1.28
CERS3-208	ENST00000560944	SCGB1D4	Q6XE38	83 aa		7.04	□□□□□ -1.28
CERS3-208	ENST00000560944	LINC00528	Q8N1L1	170 aa		7.04	□□□□□ -1.28
CERS3-208	ENST00000560944	EPM2A	B3EWF7	344 aa		7.03	□□□□□ -1.28
CERS3-208	ENST00000560944	COX17	Q14061	63 aa		7.03	□□□□□ -1.28
CERS3-208	ENST00000560944	BOD1L2	Q8IYS8	172 aa		7.03	□□□□□ -1.28
CERS3-208	ENST00000560944	LINC00474	Q9P2X8	69 aa		7.03	□□□□□ -1.28
CERS3-208	ENST00000560944	PKIG	Q9Y2B9	76 aa		7.03	□□□□□ -1.28
CERS3-208	ENST00000560944	C2orf91	Q6ZV80	131 aa		7.02	□□□□□ -1.29
CERS3-208	ENST00000560944	PRO1933	Q9H354	126 aa		7.02	□□□□□ -1.29
CERS3-208	ENST00000560944	C22orf24	Q9Y442	160 aa		7.02	□□□□□ -1.29
CERS3-208	ENST00000560944	SRRM2	Q9UQ35	2752 aa	Known RBP	7.01	□□□□□ -1.29
CERS3-208	ENST00000560944	TIMM17B	O60830	172 aa		7.01	□□□□□ -1.29
CERS3-208	ENST00000560944	LINC00308	Q8TCZ7	52 aa		7.01	□□□□□ -1.29
CERS3-208	ENST00000560944	C7orf33	Q8WU49	177 aa		7.01	□□□□□ -1.29
CERS3-208	ENST00000560944	RPL37AP8	A6NKH3	93 aa		7	□□□□□ -1.29
CERS3-208	ENST00000560944	SMIM6	P0DI80	62 aa		7	□□□□□ -1.29
CERS3-208	ENST00000560944	SPANXD	Q9BXN6	97 aa		7	□□□□□ -1.29
CERS3-208	ENST00000560944	SPANXC	Q9NY87	97 aa		7	□□□□□ -1.29
CERS3-208	ENST00000560944	IGLV5-37	A0A075B6J1	123 aa		6.99	□□□□□ -1.29
CERS3-208	ENST00000560944	KRTAP10-4	P60372	401 aa	Predicted RBP	6.99	□□□□□ -1.29
CERS3-208	ENST00000560944		Q5VSD8	79 aa		6.99	□□□□□ -1.29
CERS3-208	ENST00000560944	SLC25A34	Q6PIV7	304 aa		6.99	□□□□□ -1.29
CERS3-208	ENST00000560944	LINC00167	Q96N53	147 aa		6.99	□□□□□ -1.29
CERS3-208	ENST00000560944	PLA2G2D	Q9UNK4	145 aa		6.99	□□□□□ -1.29
CERS3-208	ENST00000560944	IGKV2-28	A0A075B6P5	120 aa		6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	TMEM238	C9JI98	176 aa		6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	IGKV2D-28	P01615	120 aa		6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	HNRNPA3	P51991	378 aa	Known RBP	6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	MRPL55	Q7Z7F7	128 aa	Known RBP	6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	MUSTN1	Q8IVN3	82 aa		6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	NKAPP1	Q8N9T2	125 aa		6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	PCLO	Q9Y6V0	5065 aa		6.98	□□□□□ -1.29
CERS3-208	ENST00000560944	LINC00587	B1AMM8	73 aa		6.97	□□□□□ -1.29
CERS3-208	ENST00000560944	DLEU1	O43261	78 aa		6.97	□□□□□ -1.29
CERS3-208	ENST00000560944	UBE2B	P63146	152 aa		6.97	□□□□□ -1.29
CERS3-208	ENST00000560944	FAT3	Q8TDW7	4589 aa		6.97	□□□□□ -1.29
CERS3-208	ENST00000560944	PSORS1C2	Q9UIG4	136 aa		6.97	□□□□□ -1.29
CERS3-208	ENST00000560944	LOC107984156	A0A0G2JMH3	177 aa		6.96	□□□□□ -1.3
CERS3-208	ENST00000560944	RPL37A	P61513	92 aa	Known RBP	6.96	□□□□□ -1.3
CERS3-208	ENST00000560944	ARL17A	Q8IVW1	177 aa		6.96	□□□□□ -1.3
CERS3-208	ENST00000560944		Q8N1X5	172 aa		6.96	□□□□□ -1.3
CERS3-208	ENST00000560944	C12orf57	Q99622	126 aa		6.96	□□□□□ -1.3
CERS3-208	ENST00000560944	MIEN1	Q9BRT3	115 aa		6.96	□□□□□ -1.3
CERS3-208	ENST00000560944	MYCBP2	O75592	4640 aa		6.95	□□□□□ -1.3
CERS3-208	ENST00000560944	TRBV10-3	A0A0K0K1G6	114 aa		6.95	□□□□□ -1.3
CERS3-208	ENST00000560944	S100A12	P80511	92 aa		6.95	□□□□□ -1.3
CERS3-208	ENST00000560944	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.95	□□□□□ -1.3
CERS3-208	ENST00000560944	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
CERS3-208	ENST00000560944	LINC00337	Q8N6G1	96 aa		6.94	□□□□□ -1.3
CERS3-208	ENST00000560944	LRP1	Q07954	4544 aa	Known RBP	6.94	□□□□□ -1.3
CERS3-208	ENST00000560944		M0R378	163 aa		6.93	□□□□□ -1.3
CERS3-208	ENST00000560944	RPL24	P83731	157 aa	Known RBP	6.93	□□□□□ -1.3
CERS3-208	ENST00000560944	HIST1H4G	Q99525	98 aa		6.93	□□□□□ -1.3
CERS3-208	ENST00000560944	IGLV1-50	A0A075B6I6	118 aa		6.92	□□□□□ -1.3
CERS3-208	ENST00000560944	C1orf137	Q5JT78	98 aa		6.92	□□□□□ -1.3
CERS3-208	ENST00000560944	LINC00518	Q8N0U6	118 aa		6.92	□□□□□ -1.3
CERS3-208	ENST00000560944	UQCR10	Q9UDW1	63 aa		6.92	□□□□□ -1.3
CERS3-208	ENST00000560944		A4D1N5	150 aa		6.91	□□□□□ -1.3
CERS3-208	ENST00000560944	FXYD2	P54710	66 aa		6.91	□□□□□ -1.3
CERS3-208	ENST00000560944	LBH	Q53QV2	105 aa	Predicted RBP	6.91	□□□□□ -1.3
CERS3-208	ENST00000560944	HIGD1B	Q9P298	99 aa		6.91	□□□□□ -1.3
CERS3-208	ENST00000560944	FLG2	Q5D862	2391 aa	Predicted RBP	6.91	□□□□□ -1.3
CERS3-208	ENST00000560944	FAM229A	H3BQW9	127 aa		6.9	□□□□□ -1.3
CERS3-208	ENST00000560944	NDUFC2	O95298	119 aa		6.9	□□□□□ -1.3
CERS3-208	ENST00000560944	IFITM1	P13164	125 aa		6.9	□□□□□ -1.3
CERS3-208	ENST00000560944	DDT	P30046	118 aa		6.9	□□□□□ -1.3
CERS3-208	ENST00000560944	IGLV6-57	P01721	117 aa		6.89	□□□□□ -1.31
CERS3-208	ENST00000560944	TRBV10-2	A0A0K0K1G8	114 aa		6.88	□□□□□ -1.31
CERS3-208	ENST00000560944		K7ERJ3	54 aa		6.88	□□□□□ -1.31
CERS3-208	ENST00000560944	PRLH	P81277	87 aa		6.88	□□□□□ -1.31
CERS3-208	ENST00000560944		Q6ZVH6	145 aa		6.88	□□□□□ -1.31
CERS3-208	ENST00000560944	OR13C6P	Q8NH95	151 aa		6.88	□□□□□ -1.31
CERS3-208	ENST00000560944	TMEM126A	Q9H061	195 aa		6.88	□□□□□ -1.31
CERS3-208	ENST00000560944	HSD52	Q0P140	79 aa		6.87	□□□□□ -1.31
CERS3-208	ENST00000560944	S100A7L2	Q5SY68	101 aa		6.87	□□□□□ -1.31
CERS3-208	ENST00000560944	REG3G	Q6UW15	175 aa		6.87	□□□□□ -1.31
CERS3-208	ENST00000560944	CEND1	Q8N111	149 aa		6.87	□□□□□ -1.31
CERS3-208	ENST00000560944	PRY	O14603	147 aa		6.86	□□□□□ -1.31
CERS3-208	ENST00000560944	BCE1	O60756	84 aa		6.86	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms