RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 KRTAP4-1Q9BYQ7 146 aa9□□□□□ -0.97
AC243562.3-201ENST00000559866 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 IGKV2-28A0A075B6P5 120 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 IGLV5-45A0A087WSX0 123 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 IGKV2D-28P01615 120 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 SPINK8P0C7L1 97 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 NDUFA6P56556 154 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
AC243562.3-201ENST00000559866 H3BRM9 83 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
AC243562.3-201ENST00000559866 IGLC3P0DOY3 106 aa8.97□□□□□ -0.97
AC243562.3-201ENST00000559866 LINC00310P59036 64 aa8.97□□□□□ -0.97
AC243562.3-201ENST00000559866 CTAG1AP78358 180 aa8.97□□□□□ -0.97
AC243562.3-201ENST00000559866 FAM19A1Q7Z5A9 133 aa8.97□□□□□ -0.97
AC243562.3-201ENST00000559866 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
AC243562.3-201ENST00000559866 TRAV12-1A0A0B4J245 112 aa8.96□□□□□ -0.98
AC243562.3-201ENST00000559866 LEPROTL1O95214 131 aa8.96□□□□□ -0.98
AC243562.3-201ENST00000559866 PRLHP81277 87 aa8.96□□□□□ -0.98
AC243562.3-201ENST00000559866 HSPB8Q9UJY1 196 aa8.96□□□□□ -0.98
AC243562.3-201ENST00000559866 PFN2P35080 140 aa8.95□□□□□ -0.98
AC243562.3-201ENST00000559866 RPL24P83731 157 aaKnown RBP8.94□□□□□ -0.98
AC243562.3-201ENST00000559866 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
AC243562.3-201ENST00000559866 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
AC243562.3-201ENST00000559866 TMEM126AQ9H061 195 aa8.93□□□□□ -0.98
AC243562.3-201ENST00000559866 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
AC243562.3-201ENST00000559866 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
AC243562.3-201ENST00000559866 COA6Q5JTJ3 125 aaKnown RBP8.91□□□□□ -0.98
AC243562.3-201ENST00000559866 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 TMEM238C9JI98 176 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 VPREB1P12018 145 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 FABP4P15090 132 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 SND1-IT1Q9HBX3 110 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 ERG28Q9UKR5 140 aa8.9□□□□□ -0.98
AC243562.3-201ENST00000559866 COX17Q14061 63 aa8.89□□□□□ -0.99
AC243562.3-201ENST00000559866 MAP1LC3CQ9BXW4 147 aa8.89□□□□□ -0.99
AC243562.3-201ENST00000559866 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
AC243562.3-201ENST00000559866 M0R378 163 aa8.88□□□□□ -0.99
AC243562.3-201ENST00000559866 SFTA2Q6UW10 78 aa8.88□□□□□ -0.99
AC243562.3-201ENST00000559866 HIGD2AQ9BW72 106 aa8.88□□□□□ -0.99
AC243562.3-201ENST00000559866 H0Y8G0 127 aa8.87□□□□□ -0.99
AC243562.3-201ENST00000559866 PLNP26678 52 aa8.87□□□□□ -0.99
AC243562.3-201ENST00000559866 ASB16-AS1Q495Z4 193 aa8.87□□□□□ -0.99
AC243562.3-201ENST00000559866 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
AC243562.3-201ENST00000559866 PLEKHB2Q96CS7 222 aa8.87□□□□□ -0.99
AC243562.3-201ENST00000559866 LCE2CQ5TA81 110 aa8.86□□□□□ -0.99
AC243562.3-201ENST00000559866 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
AC243562.3-201ENST00000559866 ZNF706Q9Y5V0 76 aaPredicted RBP8.86□□□□□ -0.99
AC243562.3-201ENST00000559866 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
AC243562.3-201ENST00000559866 FP248Q71RG6 208 aaPredicted RBP8.85□□□□□ -0.99
AC243562.3-201ENST00000559866 ZNF625Q96I27 306 aaPredicted RBP8.85□□□□□ -0.99
AC243562.3-201ENST00000559866 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
AC243562.3-201ENST00000559866 LINC00337Q8N6G1 96 aa8.84□□□□□ -0.99
AC243562.3-201ENST00000559866 DPM2O94777 84 aa8.83□□□□□ -1
AC243562.3-201ENST00000559866 SYS1-DBNDD2H3BUS1 97 aa8.82□□□□□ -1
AC243562.3-201ENST00000559866 SPRR4Q96PI1 79 aa8.82□□□□□ -1
AC243562.3-201ENST00000559866 IGKCP01834 107 aa8.81□□□□□ -1
AC243562.3-201ENST00000559866 S100A6P06703 90 aa8.81□□□□□ -1
AC243562.3-201ENST00000559866 LINC00158P58513 81 aa8.81□□□□□ -1
AC243562.3-201ENST00000559866 HERVK_113P61574 105 aa8.8□□□□□ -1
AC243562.3-201ENST00000559866 PET117Q6UWS5 81 aa8.8□□□□□ -1
AC243562.3-201ENST00000559866 PRYO14603 147 aa8.78□□□□□ -1
AC243562.3-201ENST00000559866 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
AC243562.3-201ENST00000559866 LINC01545Q5VT33 79 aa8.78□□□□□ -1
AC243562.3-201ENST00000559866 Q8NBF4 154 aa8.78□□□□□ -1
AC243562.3-201ENST00000559866 Q8NDZ9 215 aa8.78□□□□□ -1
AC243562.3-201ENST00000559866 PMCHL2Q9BQD1 86 aa8.78□□□□□ -1
AC243562.3-201ENST00000559866 C20orf202A1L168 122 aa8.77□□□□□ -1.01
AC243562.3-201ENST00000559866 S100A2P29034 98 aa8.77□□□□□ -1.01
AC243562.3-201ENST00000559866 NDUFA12Q9UI09 145 aa8.77□□□□□ -1.01
AC243562.3-201ENST00000559866 LEPROTO15243 131 aa8.76□□□□□ -1.01
AC243562.3-201ENST00000559866 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
AC243562.3-201ENST00000559866 AKR1D1P51857 326 aa8.76□□□□□ -1.01
AC243562.3-201ENST00000559866 KRTDAPP60985 99 aa8.76□□□□□ -1.01
AC243562.3-201ENST00000559866 HERV-K104P63124 156 aa8.76□□□□□ -1.01
AC243562.3-201ENST00000559866 DAND5Q8N907 189 aa8.76□□□□□ -1.01
AC243562.3-201ENST00000559866 A0A0U1RRA0 63 aa8.75□□□□□ -1.01
AC243562.3-201ENST00000559866 LINC00587B1AMM8 73 aa8.75□□□□□ -1.01
AC243562.3-201ENST00000559866 SPINK1P00995 79 aa8.75□□□□□ -1.01
AC243562.3-201ENST00000559866 MT1HP80294 61 aa8.75□□□□□ -1.01
AC243562.3-201ENST00000559866 S100A12P80511 92 aa8.75□□□□□ -1.01
AC243562.3-201ENST00000559866 MYMXA0A1B0GTQ4 84 aa8.74□□□□□ -1.01
AC243562.3-201ENST00000559866 ETDCA0A1B0GVM5 59 aa8.74□□□□□ -1.01
AC243562.3-201ENST00000559866 SEC61BP60468 96 aaKnown RBP8.74□□□□□ -1.01
AC243562.3-201ENST00000559866 HIST3H2BBQ8N257 126 aa8.74□□□□□ -1.01
AC243562.3-201ENST00000559866 J3QQQ9 107 aa8.73□□□□□ -1.01
AC243562.3-201ENST00000559866 NMUP48645 174 aa8.73□□□□□ -1.01
AC243562.3-201ENST00000559866 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms