RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 J3QQQ9 107 aa5.67□□□□□ -1.5
HMG20A-209ENST00000559728 GAGE2EQ4V326 116 aa5.67□□□□□ -1.5
HMG20A-209ENST00000559728 Q8N1X5 172 aa5.67□□□□□ -1.5
HMG20A-209ENST00000559728 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
HMG20A-209ENST00000559728 GAGE2DQ9UEU5 116 aa5.67□□□□□ -1.5
HMG20A-209ENST00000559728 Q8NDZ9 215 aa5.66□□□□□ -1.5
HMG20A-209ENST00000559728 TTTY13Q9BZ97 58 aa5.66□□□□□ -1.5
HMG20A-209ENST00000559728 XAGE1AQ9HD64 81 aa5.66□□□□□ -1.5
HMG20A-209ENST00000559728 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
HMG20A-209ENST00000559728 NDUFA12Q9UI09 145 aa5.66□□□□□ -1.5
HMG20A-209ENST00000559728 ERG28Q9UKR5 140 aa5.66□□□□□ -1.5
HMG20A-209ENST00000559728 C20orf202A1L168 122 aa5.65□□□□□ -1.5
HMG20A-209ENST00000559728 PFN2P35080 140 aa5.65□□□□□ -1.5
HMG20A-209ENST00000559728 HERVK_113P61574 105 aa5.65□□□□□ -1.5
HMG20A-209ENST00000559728 SERTAD4-AS1Q5TG53 156 aa5.65□□□□□ -1.5
HMG20A-209ENST00000559728 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.5
HMG20A-209ENST00000559728 PKIGQ9Y2B9 76 aa5.65□□□□□ -1.5
HMG20A-209ENST00000559728 SMIM13P0DJ93 91 aa5.64□□□□□ -1.51
HMG20A-209ENST00000559728 SFTA2Q6UW10 78 aa5.64□□□□□ -1.51
HMG20A-209ENST00000559728 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 MYMXA0A1B0GTQ4 84 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 NMUP48645 174 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 HERV-K104P63124 156 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 COX17Q14061 63 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 PHF5AQ7RTV0 110 aaKnown RBP5.63□□□□□ -1.51
HMG20A-209ENST00000559728 LITAFQ99732 161 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 SND1-IT1Q9HBX3 110 aa5.63□□□□□ -1.51
HMG20A-209ENST00000559728 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 A0A0U1RRA0 63 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 LGALS3P17931 250 aaKnown RBP5.62□□□□□ -1.51
HMG20A-209ENST00000559728 JOSD1Q15040 202 aaPredicted RBP5.62□□□□□ -1.51
HMG20A-209ENST00000559728 ADAMTSL4-AS1Q5T5F5 129 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 Q5VSD8 79 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 FAM19A5Q7Z5A7 132 aaPredicted RBP5.62□□□□□ -1.51
HMG20A-209ENST00000559728 PCP2Q8IVA1 136 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 DPH3Q96FX2 82 aa5.62□□□□□ -1.51
HMG20A-209ENST00000559728 IGLV5-37A0A075B6J1 123 aa5.61□□□□□ -1.51
HMG20A-209ENST00000559728 VPREB1P12018 145 aa5.61□□□□□ -1.51
HMG20A-209ENST00000559728 LINC00158P58513 81 aa5.61□□□□□ -1.51
HMG20A-209ENST00000559728 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
HMG20A-209ENST00000559728 SRRM2Q9UQ35 2752 aaKnown RBP5.6□□□□□ -1.51
HMG20A-209ENST00000559728 LOC107984156A0A0G2JMH3 177 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 SCGB1D1O95968 90 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 AKR1D1P51857 326 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 HNRNPA3P51991 378 aaKnown RBP5.6□□□□□ -1.51
HMG20A-209ENST00000559728 PYY3Q5JQD4 70 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 SOSTDC1Q6X4U4 206 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 ARL17AQ8IVW1 177 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 DAND5Q8N907 189 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 TP73-AS1Q9UF72 201 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 C22orf24Q9Y442 160 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
HMG20A-209ENST00000559728 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
HMG20A-209ENST00000559728 M0QXV9 152 aa5.59□□□□□ -1.51
HMG20A-209ENST00000559728 MEIG1Q5JSS6 88 aa5.59□□□□□ -1.51
HMG20A-209ENST00000559728 TIMM17BO60830 172 aa5.58□□□□□ -1.52
HMG20A-209ENST00000559728 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
HMG20A-209ENST00000559728 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
HMG20A-209ENST00000559728 LINC00587B1AMM8 73 aa5.57□□□□□ -1.52
HMG20A-209ENST00000559728 RPL37AP61513 92 aaKnown RBP5.57□□□□□ -1.52
HMG20A-209ENST00000559728 PRR3P79522 188 aaKnown RBP5.57□□□□□ -1.52
HMG20A-209ENST00000559728 C7orf33Q8WU49 177 aa5.57□□□□□ -1.52
HMG20A-209ENST00000559728 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
HMG20A-209ENST00000559728 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
HMG20A-209ENST00000559728 MRPL55Q7Z7F7 128 aaKnown RBP5.56□□□□□ -1.52
HMG20A-209ENST00000559728 BOD1L2Q8IYS8 172 aa5.56□□□□□ -1.52
HMG20A-209ENST00000559728 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
HMG20A-209ENST00000559728 LINC00308Q8TCZ7 52 aa5.55□□□□□ -1.52
HMG20A-209ENST00000559728 IGLV1-50A0A075B6I6 118 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 GAGE10A6NGK3 116 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 RPL37AP8A6NKH3 93 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 COX8AP10176 69 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 NPC2P61916 151 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 SRSF9Q13242 221 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMG20A-209ENST00000559728 SPANXDQ9BXN6 97 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 SPANXCQ9NY87 97 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 PAM16Q9Y3D7 125 aa5.54□□□□□ -1.52
HMG20A-209ENST00000559728 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
HMG20A-209ENST00000559728 LOC105371267A0A1B0GV96 52 aa5.53□□□□□ -1.52
HMG20A-209ENST00000559728 HSBP1L1C9JCN9 74 aa5.53□□□□□ -1.52
HMG20A-209ENST00000559728 DLEU1O43261 78 aa5.53□□□□□ -1.52
HMG20A-209ENST00000559728 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
HMG20A-209ENST00000559728 SPATA45Q537H7 98 aa5.53□□□□□ -1.52
HMG20A-209ENST00000559728 LBHQ53QV2 105 aaPredicted RBP5.53□□□□□ -1.52
HMG20A-209ENST00000559728 C14orf144Q96I85 54 aa5.53□□□□□ -1.52
HMG20A-209ENST00000559728 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 M0R378 163 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 NCR3O14931 201 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 NDUFC2O95298 119 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 SCGB1D4Q6XE38 83 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 C2orf91Q6ZV80 131 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 NKAPP1Q8N9T2 125 aa5.52□□□□□ -1.53
HMG20A-209ENST00000559728 TMEM238C9JI98 176 aa5.51□□□□□ -1.53
HMG20A-209ENST00000559728 INAFM2P0DMQ5 153 aa5.51□□□□□ -1.53
HMG20A-209ENST00000559728 UBE2BP63146 152 aa5.51□□□□□ -1.53
HMG20A-209ENST00000559728 C1orf137Q5JT78 98 aa5.51□□□□□ -1.53
HMG20A-209ENST00000559728 KRTAP13-1Q8IUC0 172 aa5.51□□□□□ -1.53
HMG20A-209ENST00000559728 VAMP8Q9BV40 100 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms