RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 A0A1B0GV72 72 aa7.4□□□□□ -1.23
SPG11-217ENST00000559511 SNCGO76070 127 aa7.4□□□□□ -1.23
SPG11-217ENST00000559511 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.23
SPG11-217ENST00000559511 TMEM126AQ9H061 195 aa7.4□□□□□ -1.23
SPG11-217ENST00000559511 C6orf48Q9UBA6 75 aa7.4□□□□□ -1.23
SPG11-217ENST00000559511 SLPIP03973 132 aa7.39□□□□□ -1.23
SPG11-217ENST00000559511 TTC32Q5I0X7 151 aa7.39□□□□□ -1.23
SPG11-217ENST00000559511 MRAPQ8TCY5 172 aa7.39□□□□□ -1.23
SPG11-217ENST00000559511 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
SPG11-217ENST00000559511 MGAM2Q2M2H8 2515 aa7.38□□□□□ -1.23
SPG11-217ENST00000559511 HIGD2BQ4VC39 106 aa7.37□□□□□ -1.23
SPG11-217ENST00000559511 MUC7Q8TAX7 377 aa7.37□□□□□ -1.23
SPG11-217ENST00000559511 DNHD1Q96M86 4753 aa7.37□□□□□ -1.23
SPG11-217ENST00000559511 INAFM2P0DMQ5 153 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 S100A7L2Q5SY68 101 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 ACYP1P07311 99 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 GAGE2BQ13066 116 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 Q8N814 137 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 C15orf56Q8N910 161 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 SMCR5Q8TEV8 140 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 OBSCN-AS1Q96MR7 158 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
SPG11-217ENST00000559511 ZNF561-AS1K7EIQ3 104 aa7.35□□□□□ -1.23
SPG11-217ENST00000559511 LINC01556Q5JQF7 62 aa7.35□□□□□ -1.23
SPG11-217ENST00000559511 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
SPG11-217ENST00000559511 ORMDL1Q9P0S3 153 aa7.35□□□□□ -1.23
SPG11-217ENST00000559511 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.23
SPG11-217ENST00000559511 CAMK2N2Q96S95 79 aa7.34□□□□□ -1.23
SPG11-217ENST00000559511 C14orf132Q9NPU4 83 aa7.34□□□□□ -1.23
SPG11-217ENST00000559511 TRAV10A0A0B4J240 114 aa7.34□□□□□ -1.23
SPG11-217ENST00000559511 IGLV6-57P01721 117 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 GAGE2AQ6NT46 116 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 Q6Q795 121 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 A0A1B0GX51 115 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 SDIM1Q6ZPB5 146 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 Q6ZRU5 148 aa7.33□□□□□ -1.24
SPG11-217ENST00000559511 IGKV2D-24A0A075B6R9 120 aa7.32□□□□□ -1.24
SPG11-217ENST00000559511 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
SPG11-217ENST00000559511 DNAH10OSP0CZ25 163 aa7.31□□□□□ -1.24
SPG11-217ENST00000559511 LINC00575Q6W349 94 aa7.31□□□□□ -1.24
SPG11-217ENST00000559511 TRBV7-7A0A0K0K1E9 115 aa7.3□□□□□ -1.24
SPG11-217ENST00000559511 TRBV10-3A0A0K0K1G6 114 aa7.3□□□□□ -1.24
SPG11-217ENST00000559511 C2orf48Q96LS8 159 aa7.3□□□□□ -1.24
SPG11-217ENST00000559511 LYSTQ99698 3801 aa7.3□□□□□ -1.24
SPG11-217ENST00000559511 NDUFV3P56181 108 aaKnown RBP7.3□□□□□ -1.24
SPG11-217ENST00000559511 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
SPG11-217ENST00000559511 KRTAP21-3Q3LHN1 58 aa7.29□□□□□ -1.24
SPG11-217ENST00000559511 ANAPC13Q9BS18 74 aa7.29□□□□□ -1.24
SPG11-217ENST00000559511 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
SPG11-217ENST00000559511 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
SPG11-217ENST00000559511 VPREB1P12018 145 aa7.28□□□□□ -1.24
SPG11-217ENST00000559511 LINC00643Q86TS7 51 aa7.28□□□□□ -1.24
SPG11-217ENST00000559511 TRAV23DV6A0A075B6W5 121 aa7.28□□□□□ -1.24
SPG11-217ENST00000559511 TMEM256-PLSCR3K7ERE1 68 aa7.28□□□□□ -1.24
SPG11-217ENST00000559511 hADV29S1A0JD25 119 aa7.27□□□□□ -1.25
SPG11-217ENST00000559511 Q6ZRP5 223 aa7.27□□□□□ -1.25
SPG11-217ENST00000559511 DNAH9Q9NYC9 4486 aa7.26□□□□□ -1.25
SPG11-217ENST00000559511 SYCNQ0VAF6 134 aa7.25□□□□□ -1.25
SPG11-217ENST00000559511 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
SPG11-217ENST00000559511 LINC00846Q9NV44 126 aa7.25□□□□□ -1.25
SPG11-217ENST00000559511 JMJD7-PLA2G4BH0Y9G9 81 aa7.25□□□□□ -1.25
SPG11-217ENST00000559511 ZNF73O43830 326 aaPredicted RBP7.25□□□□□ -1.25
SPG11-217ENST00000559511 CASC10Q5T4H9 136 aa7.25□□□□□ -1.25
SPG11-217ENST00000559511 CCKP06307 115 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 B9D2Q9BPU9 175 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 IMUPQ9GZP8 106 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 STAB2Q8WWQ8 2551 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 F8WDY8 70 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 M0R378 163 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 Q6ZQY7 126 aa7.24□□□□□ -1.25
SPG11-217ENST00000559511 ELOF1P60002 83 aaKnown RBP7.22□□□□□ -1.25
SPG11-217ENST00000559511 COX7BP24311 80 aa7.22□□□□□ -1.25
SPG11-217ENST00000559511 FAM236AA0A1B0GUQ0 79 aa7.21□□□□□ -1.25
SPG11-217ENST00000559511 FAM236BA0A1B0GV22 79 aa7.21□□□□□ -1.25
SPG11-217ENST00000559511 USP17L23D6RBM5 183 aa7.21□□□□□ -1.25
SPG11-217ENST00000559511 DYNC2H1Q8NCM8 4307 aaKnown RBP7.21□□□□□ -1.26
SPG11-217ENST00000559511 UPK3BQ9BT76 320 aa7.21□□□□□ -1.26
SPG11-217ENST00000559511 TRBV7-6A0A0J9YX20 115 aa7.2□□□□□ -1.26
SPG11-217ENST00000559511 SERTAD4-AS1Q5TG53 156 aa7.2□□□□□ -1.26
SPG11-217ENST00000559511 LAMTOR3Q9UHA4 124 aa7.19□□□□□ -1.26
SPG11-217ENST00000559511 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
SPG11-217ENST00000559511 IGKV3D-7A0A0C4DH55 119 aa7.19□□□□□ -1.26
SPG11-217ENST00000559511 CCDC179H3BU77 68 aa7.19□□□□□ -1.26
SPG11-217ENST00000559511 RBM3P98179 157 aaKnown RBP7.19□□□□□ -1.26
SPG11-217ENST00000559511 Q6JHZ5 121 aa7.19□□□□□ -1.26
SPG11-217ENST00000559511 CSMD3Q7Z407 3707 aa7.19□□□□□ -1.26
SPG11-217ENST00000559511 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
SPG11-217ENST00000559511 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
SPG11-217ENST00000559511 Q6ZQT0 140 aa7.18□□□□□ -1.26
SPG11-217ENST00000559511 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.18□□□□□ -1.26
SPG11-217ENST00000559511 LINC00528Q8N1L1 170 aa7.18□□□□□ -1.26
SPG11-217ENST00000559511 LOC110117498A0A087WWA1 95 aa7.16□□□□□ -1.26
SPG11-217ENST00000559511 FAM168BA1KXE4 195 aa7.16□□□□□ -1.26
SPG11-217ENST00000559511 NKAPP1Q8N9T2 125 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms