RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ACANP16112 2415 aa5.66□□□□□ -1.5
SPG11-209ENST00000558253 HTN3P15516 51 aa5.66□□□□□ -1.5
SPG11-209ENST00000558253 SPAG11BQ08648 103 aa5.66□□□□□ -1.5
SPG11-209ENST00000558253 GAGE2AQ6NT46 116 aa5.66□□□□□ -1.5
SPG11-209ENST00000558253 C3orf56Q8N813 242 aa5.66□□□□□ -1.5
SPG11-209ENST00000558253 KRTAP4-11Q9BYQ6 195 aa5.66□□□□□ -1.5
SPG11-209ENST00000558253 SETXQ7Z333 2677 aaKnown RBP5.65□□□□□ -1.5
SPG11-209ENST00000558253 NDUFC2-KCTD14E9PQ53 114 aa5.65□□□□□ -1.5
SPG11-209ENST00000558253 MRAPQ8TCY5 172 aa5.65□□□□□ -1.5
SPG11-209ENST00000558253 OBSCN-AS1Q96MR7 158 aa5.65□□□□□ -1.5
SPG11-209ENST00000558253 LINC00167Q96N53 147 aa5.65□□□□□ -1.5
SPG11-209ENST00000558253 ORMDL1Q9P0S3 153 aa5.65□□□□□ -1.5
SPG11-209ENST00000558253 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
SPG11-209ENST00000558253 JMJD7-PLA2G4BH0Y9G9 81 aa5.64□□□□□ -1.51
SPG11-209ENST00000558253 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
SPG11-209ENST00000558253 CLPSL2Q6UWE3 100 aa5.64□□□□□ -1.51
SPG11-209ENST00000558253 FAM218AQ96MZ4 157 aa5.64□□□□□ -1.51
SPG11-209ENST00000558253 KLK12Q9UKR0 248 aa5.64□□□□□ -1.51
SPG11-209ENST00000558253 ZNF469Q96JG9 3925 aaPredicted RBP5.64□□□□□ -1.51
SPG11-209ENST00000558253 MTORP42345 2549 aa5.63□□□□□ -1.51
SPG11-209ENST00000558253 HIST1H4AP62805 103 aaKnown RBP5.63□□□□□ -1.51
SPG11-209ENST00000558253 S100A7L2Q5SY68 101 aa5.63□□□□□ -1.51
SPG11-209ENST00000558253 KPRPQ5T749 579 aaPredicted RBP5.63□□□□□ -1.51
SPG11-209ENST00000558253 ENHOQ6UWT2 76 aa5.63□□□□□ -1.51
SPG11-209ENST00000558253 C2orf48Q96LS8 159 aa5.63□□□□□ -1.51
SPG11-209ENST00000558253 FASNP49327 2511 aaKnown RBP5.63□□□□□ -1.51
SPG11-209ENST00000558253 IGLV10-54A0A075B6I4 117 aa5.62□□□□□ -1.51
SPG11-209ENST00000558253 TRBV7-6A0A0J9YX20 115 aa5.62□□□□□ -1.51
SPG11-209ENST00000558253 CYSRT1A8MQ03 144 aa5.62□□□□□ -1.51
SPG11-209ENST00000558253 KRTAP10-11P60412 298 aa5.62□□□□□ -1.51
SPG11-209ENST00000558253 FAM19A5Q7Z5A7 132 aaPredicted RBP5.62□□□□□ -1.51
SPG11-209ENST00000558253 Q8N814 137 aa5.62□□□□□ -1.51
SPG11-209ENST00000558253 A0A087WYN8 130 aa5.61□□□□□ -1.51
SPG11-209ENST00000558253 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
SPG11-209ENST00000558253 LECT2O14960 151 aa5.61□□□□□ -1.51
SPG11-209ENST00000558253 LINC01556Q5JQF7 62 aa5.61□□□□□ -1.51
SPG11-209ENST00000558253 Q9HAA7 133 aa5.61□□□□□ -1.51
SPG11-209ENST00000558253 OTOGQ6ZRI0 2925 aa5.61□□□□□ -1.51
SPG11-209ENST00000558253 NANOS2P60321 138 aaKnown RBP5.6□□□□□ -1.51
SPG11-209ENST00000558253 RPL18AQ02543 176 aaKnown RBP5.6□□□□□ -1.51
SPG11-209ENST00000558253 KRTAP24-1Q3LI83 254 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 ATP5EP2Q5VTU8 51 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 Q6JHZ5 121 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 C11orf45Q8TAV5 145 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 C22orf24Q9Y442 160 aa5.6□□□□□ -1.51
SPG11-209ENST00000558253 NOTCH3Q9UM47 2321 aa5.59□□□□□ -1.51
SPG11-209ENST00000558253 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
SPG11-209ENST00000558253 BCE1O60756 84 aa5.59□□□□□ -1.51
SPG11-209ENST00000558253 IGLV6-57P01721 117 aa5.59□□□□□ -1.51
SPG11-209ENST00000558253 LINC00575Q6W349 94 aa5.59□□□□□ -1.51
SPG11-209ENST00000558253 C2CD3Q4AC94 2353 aa5.59□□□□□ -1.51
SPG11-209ENST00000558253 TRAV10A0A0B4J240 114 aa5.58□□□□□ -1.52
SPG11-209ENST00000558253 PDE6GP18545 87 aa5.58□□□□□ -1.52
SPG11-209ENST00000558253 Q6ZTC4 211 aa5.58□□□□□ -1.52
SPG11-209ENST00000558253 CAMK2N2Q96S95 79 aa5.58□□□□□ -1.52
SPG11-209ENST00000558253 C1orf43Q9BWL3 253 aa5.58□□□□□ -1.52
SPG11-209ENST00000558253 JMJD1CQ15652 2540 aa5.58□□□□□ -1.52
SPG11-209ENST00000558253 NIPBLQ6KC79 2804 aaeCLIP5.57□□□□□ -1.52
SPG11-209ENST00000558253 FN1P02751 2386 aaKnown RBP5.57□□□□□ -1.52
SPG11-209ENST00000558253 SETD2Q9BYW2 2564 aaPredicted RBP5.57□□□□□ -1.52
SPG11-209ENST00000558253 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 CCKP06307 115 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 DNAH10OSP0CZ25 163 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 ESRGQ1W209 222 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 C6orf99Q4VX62 202 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 C10orf25Q5T742 122 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 KRTAP26-1Q6PEX3 210 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 RMI2Q96E14 147 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
SPG11-209ENST00000558253 NSD1Q96L73 2696 aaPredicted RBP5.57□□□□□ -1.52
SPG11-209ENST00000558253 M0R378 163 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 NCR3O14931 201 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 C9orf116Q5BN46 136 aaPredicted RBP5.56□□□□□ -1.52
SPG11-209ENST00000558253 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 WFDC10BQ8IUB3 73 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 C6orf223Q8N319 242 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 C6orf48Q9UBA6 75 aa5.56□□□□□ -1.52
SPG11-209ENST00000558253 GCN1Q92616 2671 aaKnown RBP5.55□□□□□ -1.52
SPG11-209ENST00000558253 TRAV23DV6A0A075B6W5 121 aa5.55□□□□□ -1.52
SPG11-209ENST00000558253 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
SPG11-209ENST00000558253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.55□□□□□ -1.52
SPG11-209ENST00000558253 DIRC1Q969H9 104 aa5.55□□□□□ -1.52
SPG11-209ENST00000558253 NOTCH2Q04721 2471 aa5.55□□□□□ -1.52
SPG11-209ENST00000558253 NBPF19A0A087WUL8 3843 aa5.54□□□□□ -1.52
SPG11-209ENST00000558253 LOC110117498A0A087WWA1 95 aa5.54□□□□□ -1.52
SPG11-209ENST00000558253 TRBV10-3A0A0K0K1G6 114 aa5.54□□□□□ -1.52
SPG11-209ENST00000558253 RETNQ9HD89 108 aa5.54□□□□□ -1.52
SPG11-209ENST00000558253 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 TLX1NBP0CAT3 122 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 COX7BP24311 80 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 SYCNQ0VAF6 134 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 SMCR5Q8TEV8 140 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 C14orf132Q9NPU4 83 aa5.53□□□□□ -1.52
SPG11-209ENST00000558253 HECTD1Q9ULT8 2610 aa5.52□□□□□ -1.53
SPG11-209ENST00000558253 HIVEP1P15822 2718 aa5.52□□□□□ -1.53
SPG11-209ENST00000558253 ZNF73O43830 326 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms