RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 HIST1H2BBP33778 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BDP58876 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BCP62807 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 COX17Q14061 63 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST2H2BEQ16778 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.2□□□□□ -1.58
PSEN1-223ENST00000557511 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BHQ93079 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BNQ99877 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 HIST1H2BMQ99879 126 aa5.2□□□□□ -1.58
PSEN1-223ENST00000557511 FAM168BA1KXE4 195 aa5.19□□□□□ -1.58
PSEN1-223ENST00000557511 HERV-K104P63124 156 aa5.19□□□□□ -1.58
PSEN1-223ENST00000557511 MEIG1Q5JSS6 88 aa5.19□□□□□ -1.58
PSEN1-223ENST00000557511 C1orf137Q5JT78 98 aa5.19□□□□□ -1.58
PSEN1-223ENST00000557511 C9orf129Q5T035 196 aaKnown RBP5.19□□□□□ -1.58
PSEN1-223ENST00000557511 ZNF625Q96I27 306 aaPredicted RBP5.19□□□□□ -1.58
PSEN1-223ENST00000557511 ERG28Q9UKR5 140 aa5.19□□□□□ -1.58
PSEN1-223ENST00000557511 MYMXA0A1B0GTQ4 84 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
PSEN1-223ENST00000557511 NUPR1O60356 82 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 IGKCP01834 107 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 LINC00158P58513 81 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
PSEN1-223ENST00000557511 RPL24P83731 157 aaKnown RBP5.18□□□□□ -1.58
PSEN1-223ENST00000557511 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 SPINK6Q6UWN8 80 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 PSORS1C2Q9UIG4 136 aa5.18□□□□□ -1.58
PSEN1-223ENST00000557511 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
PSEN1-223ENST00000557511 LGALS3P17931 250 aaKnown RBP5.17□□□□□ -1.58
PSEN1-223ENST00000557511 MRPL55Q7Z7F7 128 aaKnown RBP5.17□□□□□ -1.58
PSEN1-223ENST00000557511 TP73-AS1Q9UF72 201 aa5.17□□□□□ -1.58
PSEN1-223ENST00000557511 NDUFA12Q9UI09 145 aa5.17□□□□□ -1.58
PSEN1-223ENST00000557511 C22orf24Q9Y442 160 aa5.17□□□□□ -1.58
PSEN1-223ENST00000557511 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
PSEN1-223ENST00000557511 C20orf202A1L168 122 aa5.16□□□□□ -1.58
PSEN1-223ENST00000557511 LEPROTO15243 131 aa5.16□□□□□ -1.58
PSEN1-223ENST00000557511 PET117Q6UWS5 81 aa5.16□□□□□ -1.58
PSEN1-223ENST00000557511 PMCHL2Q9BQD1 86 aa5.16□□□□□ -1.58
PSEN1-223ENST00000557511 A0A0U1RRA0 63 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 SYS1-DBNDD2H3BUS1 97 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 NMUP48645 174 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 AKR1D1P51857 326 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 SERTAD4-AS1Q5TG53 156 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 DIRC1Q969H9 104 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 SND1-IT1Q9HBX3 110 aa5.15□□□□□ -1.59
PSEN1-223ENST00000557511 J3QQQ9 107 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 IGLV7-43P04211 117 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 S100A6P06703 90 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 S100A2P29034 98 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 HNRNPA3P51991 378 aaKnown RBP5.14□□□□□ -1.59
PSEN1-223ENST00000557511 KRTDAPP60985 99 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 S100A12P80511 92 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 MIEN1Q9BRT3 115 aa5.14□□□□□ -1.59
PSEN1-223ENST00000557511 GAGE10A6NGK3 116 aa5.13□□□□□ -1.59
PSEN1-223ENST00000557511 SMIM13P0DJ93 91 aa5.13□□□□□ -1.59
PSEN1-223ENST00000557511 COA6Q5JTJ3 125 aaKnown RBP5.13□□□□□ -1.59
PSEN1-223ENST00000557511 LINC00167Q96N53 147 aa5.13□□□□□ -1.59
PSEN1-223ENST00000557511 FLG2Q5D862 2391 aaPredicted RBP5.12□□□□□ -1.59
PSEN1-223ENST00000557511 IGLV5-37A0A075B6J1 123 aa5.12□□□□□ -1.59
PSEN1-223ENST00000557511 RPL37AP8A6NKH3 93 aa5.12□□□□□ -1.59
PSEN1-223ENST00000557511 RPL28P46779 137 aaKnown RBP5.12□□□□□ -1.59
PSEN1-223ENST00000557511 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
PSEN1-223ENST00000557511 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
PSEN1-223ENST00000557511 E9PLD3 99 aa5.11□□□□□ -1.59
PSEN1-223ENST00000557511 C3orf79P0CE67 100 aa5.11□□□□□ -1.59
PSEN1-223ENST00000557511 UBE2AP49459 152 aa5.11□□□□□ -1.59
PSEN1-223ENST00000557511 SRSF9Q13242 221 aaKnown RBP eCLIP5.11□□□□□ -1.59
PSEN1-223ENST00000557511 LINC01545Q5VT33 79 aa5.11□□□□□ -1.59
PSEN1-223ENST00000557511 KRTAP7-1Q8IUC3 87 aa5.11□□□□□ -1.59
PSEN1-223ENST00000557511 BOD1L2Q8IYS8 172 aa5.11□□□□□ -1.59
PSEN1-223ENST00000557511 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
PSEN1-223ENST00000557511 M0R378 163 aa5.1□□□□□ -1.59
PSEN1-223ENST00000557511 ZNF861PO60384 105 aa5.1□□□□□ -1.59
PSEN1-223ENST00000557511 BCE1O60756 84 aa5.1□□□□□ -1.59
PSEN1-223ENST00000557511 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
PSEN1-223ENST00000557511 VPREB1P12018 145 aa5.1□□□□□ -1.59
PSEN1-223ENST00000557511 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
PSEN1-223ENST00000557511 MYCBP2O75592 4640 aa5.09□□□□□ -1.59
PSEN1-223ENST00000557511 H0Y9J4 135 aa5.09□□□□□ -1.59
PSEN1-223ENST00000557511 LINC01600Q96MT4 127 aa5.09□□□□□ -1.59
PSEN1-223ENST00000557511 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
PSEN1-223ENST00000557511 HSBP1L1C9JCN9 74 aa5.08□□□□□ -1.6
PSEN1-223ENST00000557511 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
PSEN1-223ENST00000557511 FAM19A1Q7Z5A9 133 aa5.08□□□□□ -1.6
PSEN1-223ENST00000557511 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
PSEN1-223ENST00000557511 IGLV1-50A0A075B6I6 118 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 ZNF815PA8K554 130 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 NCR3O14931 201 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 SNRPEP62304 92 aaKnown RBP5.07□□□□□ -1.6
PSEN1-223ENST00000557511 SCGB1D4Q6XE38 83 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 COPS9Q8WXC6 57 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 CBY1Q9Y3M2 126 aa5.07□□□□□ -1.6
PSEN1-223ENST00000557511 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
PSEN1-223ENST00000557511 S100A7L2Q5SY68 101 aa5.06□□□□□ -1.6
PSEN1-223ENST00000557511 HIST3H2BBQ8N257 126 aa5.06□□□□□ -1.6
PSEN1-223ENST00000557511 DAND5Q8N907 189 aa5.06□□□□□ -1.6
PSEN1-223ENST00000557511 TMEM126AQ9H061 195 aa5.06□□□□□ -1.6
PSEN1-223ENST00000557511 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms