RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 J3QQQ9 107 aa10.35□□□□□ -0.75
NEK9-204ENST00000554258 ATOH7Q8N100 152 aa10.35□□□□□ -0.75
NEK9-204ENST00000554258 SCGB1D1O95968 90 aa10.34□□□□□ -0.75
NEK9-204ENST00000554258 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
NEK9-204ENST00000554258 LOC107984640A0A0U1RRK4 108 aa10.33□□□□□ -0.76
NEK9-204ENST00000554258 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
NEK9-204ENST00000554258 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
NEK9-204ENST00000554258 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
NEK9-204ENST00000554258 NMUP48645 174 aa10.32□□□□□ -0.76
NEK9-204ENST00000554258 C9orf116Q5BN46 136 aaPredicted RBP10.32□□□□□ -0.76
NEK9-204ENST00000554258 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
NEK9-204ENST00000554258 HERV-K104P63124 156 aa10.31□□□□□ -0.76
NEK9-204ENST00000554258 MAJINQ3KP22 176 aa10.31□□□□□ -0.76
NEK9-204ENST00000554258 MYMXA0A1B0GTQ4 84 aa10.3□□□□□ -0.76
NEK9-204ENST00000554258 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
NEK9-204ENST00000554258 LGALS3P17931 250 aaKnown RBP10.3□□□□□ -0.76
NEK9-204ENST00000554258 A0A096LNI7 61 aa10.29□□□□□ -0.76
NEK9-204ENST00000554258 PTTG1IPP53801 180 aa10.29□□□□□ -0.76
NEK9-204ENST00000554258 COX17Q14061 63 aa10.29□□□□□ -0.76
NEK9-204ENST00000554258 PYY3Q5JQD4 70 aa10.29□□□□□ -0.76
NEK9-204ENST00000554258 Q6ZRP5 223 aa10.29□□□□□ -0.76
NEK9-204ENST00000554258 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
NEK9-204ENST00000554258 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
NEK9-204ENST00000554258 LINC00474Q9P2X8 69 aa10.27□□□□□ -0.77
NEK9-204ENST00000554258 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
NEK9-204ENST00000554258 HSBP1L1C9JCN9 74 aa10.26□□□□□ -0.77
NEK9-204ENST00000554258 PRR26Q8N8Z3 221 aa10.26□□□□□ -0.77
NEK9-204ENST00000554258 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
NEK9-204ENST00000554258 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
NEK9-204ENST00000554258 A0A0J9YXY3 114 aa10.24□□□□□ -0.77
NEK9-204ENST00000554258 KRTAP9-7A8MTY7 169 aa10.24□□□□□ -0.77
NEK9-204ENST00000554258 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
NEK9-204ENST00000554258 LOC105371267A0A1B0GV96 52 aa10.23□□□□□ -0.77
NEK9-204ENST00000554258 PFN2P35080 140 aa10.23□□□□□ -0.77
NEK9-204ENST00000554258 PCP2Q8IVA1 136 aa10.23□□□□□ -0.77
NEK9-204ENST00000554258 ZNF815PA8K554 130 aa10.22□□□□□ -0.77
NEK9-204ENST00000554258 SMIM13P0DJ93 91 aa10.22□□□□□ -0.77
NEK9-204ENST00000554258 GAGE2EQ4V326 116 aa10.22□□□□□ -0.77
NEK9-204ENST00000554258 C9orf129Q5T035 196 aaKnown RBP10.22□□□□□ -0.77
NEK9-204ENST00000554258 GAGE2DQ9UEU5 116 aa10.22□□□□□ -0.77
NEK9-204ENST00000554258 MUC17Q685J3 4493 aa10.21□□□□□ -0.77
NEK9-204ENST00000554258 TIMM17BO60830 172 aa10.21□□□□□ -0.77
NEK9-204ENST00000554258 MEIG1Q5JSS6 88 aa10.21□□□□□ -0.77
NEK9-204ENST00000554258 A0A1W2PNN7 141 aa10.2□□□□□ -0.78
NEK9-204ENST00000554258 LINC00158P58513 81 aa10.2□□□□□ -0.78
NEK9-204ENST00000554258 LITAFQ99732 161 aa10.2□□□□□ -0.78
NEK9-204ENST00000554258 VAMP8Q9BV40 100 aa10.2□□□□□ -0.78
NEK9-204ENST00000554258 LOC107984156A0A0G2JMH3 177 aa10.19□□□□□ -0.78
NEK9-204ENST00000554258 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
NEK9-204ENST00000554258 ARL17AQ8IVW1 177 aa10.19□□□□□ -0.78
NEK9-204ENST00000554258 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
NEK9-204ENST00000554258 XAGE1AQ9HD64 81 aa10.19□□□□□ -0.78
NEK9-204ENST00000554258 DLEU1O43261 78 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 COX8AP10176 69 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 SPATA45Q537H7 98 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 ADAMTSL4-AS1Q5T5F5 129 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 BOD1L2Q8IYS8 172 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 MIR7-3HGQ8N6C7 128 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 PAM16Q9Y3D7 125 aa10.18□□□□□ -0.78
NEK9-204ENST00000554258 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
NEK9-204ENST00000554258 LINC01547P58512 204 aaPredicted RBP10.16□□□□□ -0.78
NEK9-204ENST00000554258 FAM168BA1KXE4 195 aa10.15□□□□□ -0.78
NEK9-204ENST00000554258 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
NEK9-204ENST00000554258 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
NEK9-204ENST00000554258 KRTAP3-2Q9BYR7 98 aa10.14□□□□□ -0.79
NEK9-204ENST00000554258 SMIM6P0DI80 62 aa10.13□□□□□ -0.79
NEK9-204ENST00000554258 SCGB1D4Q6XE38 83 aa10.13□□□□□ -0.79
NEK9-204ENST00000554258 DAND5Q8N907 189 aa10.13□□□□□ -0.79
NEK9-204ENST00000554258 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
NEK9-204ENST00000554258 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
NEK9-204ENST00000554258 VPREB1P12018 145 aa10.12□□□□□ -0.79
NEK9-204ENST00000554258 Q8NDZ9 215 aa10.12□□□□□ -0.79
NEK9-204ENST00000554258 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
NEK9-204ENST00000554258 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
NEK9-204ENST00000554258 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
NEK9-204ENST00000554258 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
NEK9-204ENST00000554258 Q6ZVH6 145 aa10.11□□□□□ -0.79
NEK9-204ENST00000554258 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
NEK9-204ENST00000554258 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
NEK9-204ENST00000554258 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
NEK9-204ENST00000554258 S100A12P80511 92 aa10.1□□□□□ -0.79
NEK9-204ENST00000554258 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
NEK9-204ENST00000554258 LINC00308Q8TCZ7 52 aa10.1□□□□□ -0.79
NEK9-204ENST00000554258 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
NEK9-204ENST00000554258 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
NEK9-204ENST00000554258 RPL24P83731 157 aaKnown RBP10.09□□□□□ -0.79
NEK9-204ENST00000554258 FAM19A5Q7Z5A7 132 aaPredicted RBP10.09□□□□□ -0.79
NEK9-204ENST00000554258 IFITM1P13164 125 aa10.08□□□□□ -0.8
NEK9-204ENST00000554258 DIRC1Q969H9 104 aa10.08□□□□□ -0.8
NEK9-204ENST00000554258 HIGD1BQ9P298 99 aa10.08□□□□□ -0.8
NEK9-204ENST00000554258 M0QXV9 152 aa10.07□□□□□ -0.8
NEK9-204ENST00000554258 NDUFC2O95298 119 aa10.07□□□□□ -0.8
NEK9-204ENST00000554258 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
NEK9-204ENST00000554258 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
NEK9-204ENST00000554258 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.05□□□□□ -0.8
NEK9-204ENST00000554258 LBHQ53QV2 105 aaPredicted RBP10.05□□□□□ -0.8
NEK9-204ENST00000554258 MRPL55Q7Z7F7 128 aaKnown RBP10.05□□□□□ -0.8
NEK9-204ENST00000554258 TSPAN13O95857 204 aa10.04□□□□□ -0.8
NEK9-204ENST00000554258 C1orf137Q5JT78 98 aa10.04□□□□□ -0.8
NEK9-204ENST00000554258 NKAPP1Q8N9T2 125 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms