RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-220ENST00000553491 K7EMI3 77 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 DLEU1O43261 78 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 C18orf32Q8TCD1 76 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 CARD19Q96LW7 228 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 PMCHL2Q9BQD1 86 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 CBY1Q9Y3M2 126 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 PKD1P98161 4303 aa2.98□□□□□ -1.93
ATXN3-220ENST00000553491 GVQW2A0A096LPI5 108 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-220ENST00000553491 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 E9PLD3 99 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 NUPR1O60356 82 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 HSBP1O75506 76 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 IGLC3P0DOY3 106 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 CKS1BP61024 79 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 RPL18AQ02543 176 aaKnown RBP2.97□□□□□ -1.93
ATXN3-220ENST00000553491 PMVKQ15126 192 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 Q5VSD8 79 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 Q6ZRU5 148 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 FAM19A2Q8N3H0 131 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 CHAC1Q9BUX1 264 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-220ENST00000553491 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.93
ATXN3-220ENST00000553491 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 IGHV3OR16-9A0A0B4J2B5 98 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 LOC107984640A0A0U1RRK4 108 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 LINC01549A6NIU2 74 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 NDUFA1O15239 70 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 HBDP02042 147 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 UBE2D1P51668 147 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 HNRNPA3P51991 378 aaKnown RBP2.96□□□□□ -1.94
ATXN3-220ENST00000553491 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
ATXN3-220ENST00000553491 HERVK_113P63121 156 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 SEC11AP67812 179 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 AMELXQ99217 191 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 CST9LQ9H4G1 147 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 BIRC6Q9NR09 4857 aa2.96□□□□□ -1.94
ATXN3-220ENST00000553491 A0A096LNI7 61 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 FAM168BA1KXE4 195 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 PANO1I0J062 215 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 ATP5LO75964 103 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 C9orf116Q5BN46 136 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-220ENST00000553491 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 PPDPFQ9H3Y8 114 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 CDKN2A-AS1Q9UH64 79 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
ATXN3-220ENST00000553491 TINCRA0A1B0GVN0 87 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 LINC01546A6NGU7 62 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 H3BRM9 83 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
ATXN3-220ENST00000553491 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 C7orf33Q8WU49 177 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 IFI27L1Q96BM0 104 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 CHTOPQ9Y3Y2 248 aaKnown RBP2.94□□□□□ -1.94
ATXN3-220ENST00000553491 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
ATXN3-220ENST00000553491 IGLV8-61A0A075B6I0 122 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 PFN2P35080 140 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 PRR4Q16378 134 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 Q6ZSA8 131 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-220ENST00000553491 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-220ENST00000553491 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
ATXN3-220ENST00000553491 A0A096LNJ9 63 aa2.92□□□□□ -1.94
ATXN3-220ENST00000553491 KIAA0087Q14695 138 aa2.92□□□□□ -1.94
ATXN3-220ENST00000553491 Q8IZM0 81 aa2.92□□□□□ -1.94
ATXN3-220ENST00000553491 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
ATXN3-220ENST00000553491 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
ATXN3-220ENST00000553491 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
ATXN3-220ENST00000553491 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
ATXN3-220ENST00000553491 F8VRH5 84 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms