RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SMIM2Q9BVW6 85 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 KRTAP9-3Q9BYQ3 159 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 ST20Q9HBF5 79 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 HSPB8Q9UJY1 196 aa3.01□□□□□ -1.93
CKAP4-203ENST00000553039 TRBV6-5A0A0K0K1A5 114 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 C20orf202A1L168 122 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 LINC01546A6NGU7 62 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 M0QY20 66 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 M0R2T5 61 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 TCAPO15273 167 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 G0S2P27469 103 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 KRTAP10-6P60371 365 aaPredicted RBP3□□□□□ -1.93
CKAP4-203ENST00000553039 S100A12P80511 92 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 SYCNQ0VAF6 134 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 C9orf116Q5BN46 136 aaPredicted RBP3□□□□□ -1.93
CKAP4-203ENST00000553039 PYY3Q5JQD4 70 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 RPL39LQ96EH5 51 aaKnown RBP3□□□□□ -1.93
CKAP4-203ENST00000553039 KIR2DL4Q99706 377 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 NIT2Q9NQR4 276 aa3□□□□□ -1.93
CKAP4-203ENST00000553039 IGKV2D-30A0A075B6S6 120 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 SDHAF1A6NFY7 115 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 LINC01549A6NIU2 74 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 SYS1-DBNDD2H3BUS1 97 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 C3orf79P0CE67 100 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 CFC1P0CG37 223 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 FCER1GP30273 86 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 NTM-AS1Q6ZSK4 140 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 PHF5AQ7RTV0 110 aaKnown RBP2.99□□□□□ -1.93
CKAP4-203ENST00000553039 Q8N377 158 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 C20orf203Q8NBC4 194 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 RETNLBQ9BQ08 111 aa2.99□□□□□ -1.93
CKAP4-203ENST00000553039 A0A096LNJ9 63 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 IGHV1-58A0A0C4DH39 117 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 TRBV27A0A0K0K1C4 114 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 I3L3M4 83 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 UBE2L6O14933 153 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 ZNF861PO60384 105 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
CKAP4-203ENST00000553039 CXCL6P80162 114 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 MT1HP80294 61 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 C5orf47Q569G3 176 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 IFI27L1Q96BM0 104 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 TMEM243Q9BU79 118 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 VAMP8Q9BV40 100 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 CYSLTR1Q9Y271 337 aa2.98□□□□□ -1.93
CKAP4-203ENST00000553039 IGLV8-61A0A075B6I0 122 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 TSTD3H0UI37 97 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.97□□□□□ -1.93
CKAP4-203ENST00000553039 TAL2Q16559 108 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 TEX43Q6ZNM6 134 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 FP248Q71RG6 208 aaPredicted RBP2.97□□□□□ -1.93
CKAP4-203ENST00000553039 TOMM6Q96B49 74 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 SCGB3A1Q96QR1 104 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 KRTAP4-8Q9BYQ9 185 aa2.97□□□□□ -1.93
CKAP4-203ENST00000553039 IGLV4-69A0A075B6H9 119 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 IGLV4-60A0A075B6I1 120 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 IGKV3OR2-268A0A0C4DH90 116 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 APOMO95445 188 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 UBE2BP63146 152 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 LINC01545Q5VT33 79 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 LINC00304Q8N9R0 145 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 TMEM141Q96I45 108 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 LINC00846Q9NV44 126 aa2.96□□□□□ -1.94
CKAP4-203ENST00000553039 TRAV12-1A0A0B4J245 112 aa2.95□□□□□ -1.94
CKAP4-203ENST00000553039 PLNP26678 52 aa2.95□□□□□ -1.94
CKAP4-203ENST00000553039 RPL18AQ02543 176 aaKnown RBP2.95□□□□□ -1.94
CKAP4-203ENST00000553039 SMAGPQ0VAQ4 97 aa2.95□□□□□ -1.94
CKAP4-203ENST00000553039 AMMECR1LQ6DCA0 310 aa2.95□□□□□ -1.94
CKAP4-203ENST00000553039 ATOH7Q8N100 152 aa2.95□□□□□ -1.94
CKAP4-203ENST00000553039 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 IGIPA6NJ69 53 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 F8VRH5 84 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 KRTAP4-16G5E9R7 235 aaPredicted RBP2.94□□□□□ -1.94
CKAP4-203ENST00000553039 DPM2O94777 84 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 IGKCP01834 107 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 PFN2P35080 140 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 RPL39P62891 51 aaKnown RBP2.94□□□□□ -1.94
CKAP4-203ENST00000553039 PMVKQ15126 192 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 SPATA45Q537H7 98 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 SPAG11AQ6PDA7 123 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 FAM19A1Q7Z5A9 133 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 LINC00526Q96FQ7 95 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 CAMK2N2Q96S95 79 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 PMCHL2Q9BQD1 86 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 SPANXA1Q9NS26 97 aa2.94□□□□□ -1.94
CKAP4-203ENST00000553039 IGKV2D-26A0A0A0MRZ7 120 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 H7C423 109 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 M0QXV9 152 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 DDTP30046 118 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 RPL28P46779 137 aaKnown RBP2.93□□□□□ -1.94
CKAP4-203ENST00000553039 XCL1P47992 114 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 KIAA0087Q14695 138 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 SS18Q15532 418 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 ZC2HC1BQ5TFG8 222 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 OR5A1Q8NGJ0 315 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 TIMM21Q9BVV7 248 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms