RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 MIR7-3HGQ8N6C7 128 aa8.15□□□□□ -1.1
RAB5C-206ENST00000550406 DAND5Q8N907 189 aa8.15□□□□□ -1.1
RAB5C-206ENST00000550406 LITAFQ99732 161 aa8.15□□□□□ -1.1
RAB5C-206ENST00000550406 KRTAP4-5Q9BYR2 181 aa8.15□□□□□ -1.1
RAB5C-206ENST00000550406 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
RAB5C-206ENST00000550406 LINC00587B1AMM8 73 aa8.14□□□□□ -1.11
RAB5C-206ENST00000550406 HSBP1L1C9JCN9 74 aa8.13□□□□□ -1.11
RAB5C-206ENST00000550406 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
RAB5C-206ENST00000550406 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
RAB5C-206ENST00000550406 C22orf24Q9Y442 160 aa8.13□□□□□ -1.11
RAB5C-206ENST00000550406 VPS13BQ7Z7G8 4022 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 IGLV5-37A0A075B6J1 123 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 LOC107984156A0A0G2JMH3 177 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
RAB5C-206ENST00000550406 VPREB1P12018 145 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 ARL17AQ8IVW1 177 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
RAB5C-206ENST00000550406 M0QXV9 152 aa8.11□□□□□ -1.11
RAB5C-206ENST00000550406 TIMM17BO60830 172 aa8.11□□□□□ -1.11
RAB5C-206ENST00000550406 Q5VSD8 79 aa8.11□□□□□ -1.11
RAB5C-206ENST00000550406 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
RAB5C-206ENST00000550406 PRR3P79522 188 aaKnown RBP8.09□□□□□ -1.11
RAB5C-206ENST00000550406 SPATA45Q537H7 98 aa8.09□□□□□ -1.11
RAB5C-206ENST00000550406 BOD1L2Q8IYS8 172 aa8.09□□□□□ -1.11
RAB5C-206ENST00000550406 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 COX8AP10176 69 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 NPC2P61916 151 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 LINC00167Q96N53 147 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
RAB5C-206ENST00000550406 RPL37AP61513 92 aaKnown RBP8.07□□□□□ -1.12
RAB5C-206ENST00000550406 SCGB1D4Q6XE38 83 aa8.07□□□□□ -1.12
RAB5C-206ENST00000550406 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
RAB5C-206ENST00000550406 C14orf144Q96I85 54 aa8.07□□□□□ -1.12
RAB5C-206ENST00000550406 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
RAB5C-206ENST00000550406 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
RAB5C-206ENST00000550406 LINC00308Q8TCZ7 52 aa8.06□□□□□ -1.12
RAB5C-206ENST00000550406 SPANXDQ9BXN6 97 aa8.06□□□□□ -1.12
RAB5C-206ENST00000550406 SPANXCQ9NY87 97 aa8.06□□□□□ -1.12
RAB5C-206ENST00000550406 PSORS1C2Q9UIG4 136 aa8.06□□□□□ -1.12
RAB5C-206ENST00000550406 GAGE10A6NGK3 116 aa8.05□□□□□ -1.12
RAB5C-206ENST00000550406 DLEU1O43261 78 aa8.05□□□□□ -1.12
RAB5C-206ENST00000550406 NKAPP1Q8N9T2 125 aa8.05□□□□□ -1.12
RAB5C-206ENST00000550406 RPL37AP8A6NKH3 93 aa8.04□□□□□ -1.12
RAB5C-206ENST00000550406 TMEM238C9JI98 176 aa8.04□□□□□ -1.12
RAB5C-206ENST00000550406 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
RAB5C-206ENST00000550406 HNRNPA3P51991 378 aaKnown RBP8.04□□□□□ -1.12
RAB5C-206ENST00000550406 LBHQ53QV2 105 aaPredicted RBP8.04□□□□□ -1.12
RAB5C-206ENST00000550406 NCR3O14931 201 aa8.03□□□□□ -1.12
RAB5C-206ENST00000550406 UBE2BP63146 152 aa8.03□□□□□ -1.12
RAB5C-206ENST00000550406 IGLV1-50A0A075B6I6 118 aa8.02□□□□□ -1.13
RAB5C-206ENST00000550406 M0R378 163 aa8.02□□□□□ -1.13
RAB5C-206ENST00000550406 NDUFC2O95298 119 aa8.02□□□□□ -1.13
RAB5C-206ENST00000550406 MUSTN1Q8IVN3 82 aa8.02□□□□□ -1.13
RAB5C-206ENST00000550406 SPANXB1Q9NS25 103 aaPredicted RBP8.02□□□□□ -1.13
RAB5C-206ENST00000550406 C2orf91Q6ZV80 131 aa8.01□□□□□ -1.13
RAB5C-206ENST00000550406 MIEN1Q9BRT3 115 aa8.01□□□□□ -1.13
RAB5C-206ENST00000550406 IGKV2-28A0A075B6P5 120 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 TRBV10-2A0A0K0K1G8 114 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 IGKV2D-28P01615 120 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 IFITM1P13164 125 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 C1orf137Q5JT78 98 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 SLC25A34Q6PIV7 304 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 Q6ZVH6 145 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 PPDPFQ9H3Y8 114 aa8□□□□□ -1.13
RAB5C-206ENST00000550406 SRRM2Q9UQ35 2752 aaKnown RBP7.99□□□□□ -1.13
RAB5C-206ENST00000550406 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
RAB5C-206ENST00000550406 HIGD1BQ9P298 99 aa7.99□□□□□ -1.13
RAB5C-206ENST00000550406 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
RAB5C-206ENST00000550406 ABCA13Q86UQ4 5058 aa7.98□□□□□ -1.13
RAB5C-206ENST00000550406 IGLV7-43P04211 117 aa7.97□□□□□ -1.13
RAB5C-206ENST00000550406 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
RAB5C-206ENST00000550406 IGLV6-57P01721 117 aa7.96□□□□□ -1.14
RAB5C-206ENST00000550406 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
RAB5C-206ENST00000550406 S100A12P80511 92 aa7.96□□□□□ -1.14
RAB5C-206ENST00000550406 LINC00337Q8N6G1 96 aa7.96□□□□□ -1.14
RAB5C-206ENST00000550406 TMEM126AQ9H061 195 aa7.96□□□□□ -1.14
RAB5C-206ENST00000550406 KCNQ1DNQ9H478 68 aa7.96□□□□□ -1.14
RAB5C-206ENST00000550406 BCE1O60756 84 aa7.95□□□□□ -1.14
RAB5C-206ENST00000550406 DDTP30046 118 aa7.95□□□□□ -1.14
RAB5C-206ENST00000550406 SPRR1AP35321 89 aa7.94□□□□□ -1.14
RAB5C-206ENST00000550406 REG3GQ6UW15 175 aa7.94□□□□□ -1.14
RAB5C-206ENST00000550406 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
RAB5C-206ENST00000550406 COPS9Q8WXC6 57 aa7.94□□□□□ -1.14
RAB5C-206ENST00000550406 HIST1H4GQ99525 98 aa7.94□□□□□ -1.14
RAB5C-206ENST00000550406 A4D1N5 150 aa7.93□□□□□ -1.14
RAB5C-206ENST00000550406 KRTAP4-16G5E9R7 235 aaPredicted RBP7.93□□□□□ -1.14
RAB5C-206ENST00000550406 PRYO14603 147 aa7.93□□□□□ -1.14
RAB5C-206ENST00000550406 PRO1933Q9H354 126 aa7.93□□□□□ -1.14
RAB5C-206ENST00000550406 S100A7L2Q5SY68 101 aa7.92□□□□□ -1.14
RAB5C-206ENST00000550406 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
RAB5C-206ENST00000550406 LINC00518Q8N0U6 118 aa7.92□□□□□ -1.14
RAB5C-206ENST00000550406 UQCR10Q9UDW1 63 aa7.92□□□□□ -1.14
RAB5C-206ENST00000550406 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
RAB5C-206ENST00000550406 ZNF861PO60384 105 aa7.91□□□□□ -1.14
RAB5C-206ENST00000550406 OR13C6PQ8NH95 151 aa7.91□□□□□ -1.14
RAB5C-206ENST00000550406 TAL2Q16559 108 aa7.9□□□□□ -1.14
RAB5C-206ENST00000550406 FAM19A1Q7Z5A9 133 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms