RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 LINC00587B1AMM8 73 aa16.55■□□□□ 0.24
CHPT1-204ENST00000549128 ADAMTSL4-AS1Q5T5F5 129 aa16.54■□□□□ 0.24
CHPT1-204ENST00000549128 LITAFQ99732 161 aa16.52■□□□□ 0.24
CHPT1-204ENST00000549128 VAMP8Q9BV40 100 aa16.52■□□□□ 0.24
CHPT1-204ENST00000549128 PHF5AQ7RTV0 110 aaKnown RBP16.51■□□□□ 0.23
CHPT1-204ENST00000549128 Q8NDZ9 215 aa16.51■□□□□ 0.23
CHPT1-204ENST00000549128 SPATA45Q537H7 98 aa16.5■□□□□ 0.23
CHPT1-204ENST00000549128 LINC00528Q8N1L1 170 aa16.48■□□□□ 0.23
CHPT1-204ENST00000549128 SCGB1D4Q6XE38 83 aa16.47■□□□□ 0.23
CHPT1-204ENST00000549128 PLA2G2DQ9UNK4 145 aa16.47■□□□□ 0.23
CHPT1-204ENST00000549128 M0QXV9 152 aa16.46■□□□□ 0.23
CHPT1-204ENST00000549128 EIF4EBP3O60516 100 aaPredicted RBP16.46■□□□□ 0.23
CHPT1-204ENST00000549128 C22orf24Q9Y442 160 aa16.46■□□□□ 0.23
CHPT1-204ENST00000549128 VPS13BQ7Z7G8 4022 aa16.45■□□□□ 0.22
CHPT1-204ENST00000549128 TIMM17BO60830 172 aa16.45■□□□□ 0.22
CHPT1-204ENST00000549128 NPC2P61916 151 aa16.45■□□□□ 0.22
CHPT1-204ENST00000549128 Q8N1X5 172 aa16.45■□□□□ 0.22
CHPT1-204ENST00000549128 VPREB1P12018 145 aa16.44■□□□□ 0.22
CHPT1-204ENST00000549128 SOSTDC1Q6X4U4 206 aa16.44■□□□□ 0.22
CHPT1-204ENST00000549128 C14orf144Q96I85 54 aa16.43■□□□□ 0.22
CHPT1-204ENST00000549128 COX8AP10176 69 aa16.43■□□□□ 0.22
CHPT1-204ENST00000549128 KRTAP11-1Q8IUC1 163 aa16.43■□□□□ 0.22
CHPT1-204ENST00000549128 BOD1L2Q8IYS8 172 aa16.43■□□□□ 0.22
CHPT1-204ENST00000549128 LOC107984156A0A0G2JMH3 177 aa16.41■□□□□ 0.22
CHPT1-204ENST00000549128 ARL17AQ8IVW1 177 aa16.41■□□□□ 0.22
CHPT1-204ENST00000549128 IGLV5-37A0A075B6J1 123 aa16.4■□□□□ 0.22
CHPT1-204ENST00000549128 PRR3P79522 188 aaKnown RBP16.39■□□□□ 0.21
CHPT1-204ENST00000549128 Q5VSD8 79 aa16.39■□□□□ 0.21
CHPT1-204ENST00000549128 C7orf33Q8WU49 177 aa16.39■□□□□ 0.21
CHPT1-204ENST00000549128 KRTAP4-5Q9BYR2 181 aa16.38■□□□□ 0.21
CHPT1-204ENST00000549128 RPL24P83731 157 aaKnown RBP16.38■□□□□ 0.21
CHPT1-204ENST00000549128 MRPL55Q7Z7F7 128 aaKnown RBP16.38■□□□□ 0.21
CHPT1-204ENST00000549128 NKAPP1Q8N9T2 125 aa16.38■□□□□ 0.21
CHPT1-204ENST00000549128 LINC00308Q8TCZ7 52 aa16.38■□□□□ 0.21
CHPT1-204ENST00000549128 GAGE10A6NGK3 116 aa16.37■□□□□ 0.21
CHPT1-204ENST00000549128 TMEM238C9JI98 176 aa16.37■□□□□ 0.21
CHPT1-204ENST00000549128 FAM229AH3BQW9 127 aa16.37■□□□□ 0.21
CHPT1-204ENST00000549128 SMIM6P0DI80 62 aa16.37■□□□□ 0.21
CHPT1-204ENST00000549128 LINC00167Q96N53 147 aa16.36■□□□□ 0.21
CHPT1-204ENST00000549128 MIEN1Q9BRT3 115 aa16.35■□□□□ 0.21
CHPT1-204ENST00000549128 SPANXDQ9BXN6 97 aa16.35■□□□□ 0.21
CHPT1-204ENST00000549128 SPANXCQ9NY87 97 aa16.35■□□□□ 0.21
CHPT1-204ENST00000549128 DLEU1O43261 78 aa16.34■□□□□ 0.21
CHPT1-204ENST00000549128 KRTAP10-4P60372 401 aaPredicted RBP16.34■□□□□ 0.21
CHPT1-204ENST00000549128 RPL37AP61513 92 aaKnown RBP16.34■□□□□ 0.21
CHPT1-204ENST00000549128 RPL37AP8A6NKH3 93 aa16.33■□□□□ 0.2
CHPT1-204ENST00000549128 UBE2BP63146 152 aa16.33■□□□□ 0.2
CHPT1-204ENST00000549128 LBHQ53QV2 105 aaPredicted RBP16.33■□□□□ 0.2
CHPT1-204ENST00000549128 NCR3O14931 201 aa16.32■□□□□ 0.2
CHPT1-204ENST00000549128 S100A12P80511 92 aa16.32■□□□□ 0.2
CHPT1-204ENST00000549128 SRRM2Q9UQ35 2752 aaKnown RBP16.32■□□□□ 0.2
CHPT1-204ENST00000549128 PSORS1C2Q9UIG4 136 aa16.31■□□□□ 0.2
CHPT1-204ENST00000549128 SLC25A34Q6PIV7 304 aa16.3■□□□□ 0.2
CHPT1-204ENST00000549128 MUSTN1Q8IVN3 82 aa16.29■□□□□ 0.2
CHPT1-204ENST00000549128 PLA2G1BP04054 148 aaKnown RBP16.28■□□□□ 0.2
CHPT1-204ENST00000549128 C2orf91Q6ZV80 131 aa16.28■□□□□ 0.2
CHPT1-204ENST00000549128 SPANXB1Q9NS25 103 aaPredicted RBP16.28■□□□□ 0.2
CHPT1-204ENST00000549128 IGKV2-28A0A075B6P5 120 aa16.27■□□□□ 0.2
CHPT1-204ENST00000549128 M0R378 163 aa16.27■□□□□ 0.2
CHPT1-204ENST00000549128 IGKV2D-28P01615 120 aa16.27■□□□□ 0.2
CHPT1-204ENST00000549128 Q6ZVH6 145 aa16.27■□□□□ 0.2
CHPT1-204ENST00000549128 NDUFC2O95298 119 aa16.26■□□□□ 0.19
CHPT1-204ENST00000549128 SRSF9Q13242 221 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHPT1-204ENST00000549128 IGLV1-50A0A075B6I6 118 aa16.25■□□□□ 0.19
CHPT1-204ENST00000549128 IFITM1P13164 125 aa16.25■□□□□ 0.19
CHPT1-204ENST00000549128 ABCA13Q86UQ4 5058 aa16.25■□□□□ 0.19
CHPT1-204ENST00000549128 C1orf137Q5JT78 98 aa16.23■□□□□ 0.19
CHPT1-204ENST00000549128 C12orf57Q99622 126 aa16.23■□□□□ 0.19
CHPT1-204ENST00000549128 PRO1933Q9H354 126 aa16.22■□□□□ 0.19
CHPT1-204ENST00000549128 HNRNPA3P51991 378 aaKnown RBP16.21■□□□□ 0.19
CHPT1-204ENST00000549128 HIGD1BQ9P298 99 aa16.21■□□□□ 0.19
CHPT1-204ENST00000549128 TRBV10-2A0A0K0K1G8 114 aa16.21■□□□□ 0.18
CHPT1-204ENST00000549128 TRBV10-3A0A0K0K1G6 114 aa16.2■□□□□ 0.18
CHPT1-204ENST00000549128 PPDPFQ9H3Y8 114 aa16.2■□□□□ 0.18
CHPT1-204ENST00000549128 HIST1H4GQ99525 98 aa16.19■□□□□ 0.18
CHPT1-204ENST00000549128 COPS9Q8WXC6 57 aa16.17■□□□□ 0.18
CHPT1-204ENST00000549128 UQCR10Q9UDW1 63 aa16.17■□□□□ 0.18
CHPT1-204ENST00000549128 DDTP30046 118 aa16.15■□□□□ 0.18
CHPT1-204ENST00000549128 LINC00518Q8N0U6 118 aa16.15■□□□□ 0.18
CHPT1-204ENST00000549128 LINC00337Q8N6G1 96 aa16.15■□□□□ 0.18
CHPT1-204ENST00000549128 TMEM126AQ9H061 195 aa16.14■□□□□ 0.17
CHPT1-204ENST00000549128 IGLV6-57P01721 117 aa16.13■□□□□ 0.17
CHPT1-204ENST00000549128 IGLV7-43P04211 117 aa16.13■□□□□ 0.17
CHPT1-204ENST00000549128 PKHD1L1Q86WI1 4243 aa16.13■□□□□ 0.17
CHPT1-204ENST00000549128 A4D1N5 150 aa16.13■□□□□ 0.17
CHPT1-204ENST00000549128 S100A7L2Q5SY68 101 aa16.13■□□□□ 0.17
CHPT1-204ENST00000549128 REG3GQ6UW15 175 aa16.12■□□□□ 0.17
CHPT1-204ENST00000549128 KCNQ1DNQ9H478 68 aa16.12■□□□□ 0.17
CHPT1-204ENST00000549128 BCE1O60756 84 aa16.1■□□□□ 0.17
CHPT1-204ENST00000549128 OR13C6PQ8NH95 151 aa16.1■□□□□ 0.17
CHPT1-204ENST00000549128 PRYO14603 147 aa16.08■□□□□ 0.16
CHPT1-204ENST00000549128 INAFM2P0DMQ5 153 aa16.07■□□□□ 0.16
CHPT1-204ENST00000549128 TAL2Q16559 108 aa16.05■□□□□ 0.16
CHPT1-204ENST00000549128 SPRR1AP35321 89 aa16.04■□□□□ 0.16
CHPT1-204ENST00000549128 CEND1Q8N111 149 aa16.04■□□□□ 0.16
CHPT1-204ENST00000549128 FLG2Q5D862 2391 aaPredicted RBP16.04■□□□□ 0.16
CHPT1-204ENST00000549128 FAM19A1Q7Z5A9 133 aa16.04■□□□□ 0.16
CHPT1-204ENST00000549128 TRAV23DV6A0A075B6W5 121 aa16.03■□□□□ 0.16
CHPT1-204ENST00000549128 A6NDN8 102 aa16.03■□□□□ 0.16
CHPT1-204ENST00000549128 KRTAP4-16G5E9R7 235 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms