RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 Q6JHZ5 121 aa15.81■□□□□ 0.12
FOXA1-202ENST00000545425 FAM236AA0A1B0GUQ0 79 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 FAM236BA0A1B0GV22 79 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 SPAG11BQ08648 103 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 B5MCH6 92 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 OXLD1Q5BKU9 147 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 C14orf132Q9NPU4 83 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 CELA1Q9UNI1 258 aa15.8■□□□□ 0.12
FOXA1-202ENST00000545425 CCDC179H3BU77 68 aa15.79■□□□□ 0.12
FOXA1-202ENST00000545425 DEFB4AO15263 64 aa15.78■□□□□ 0.12
FOXA1-202ENST00000545425 IGLV10-54A0A075B6I4 117 aa15.77■□□□□ 0.11
FOXA1-202ENST00000545425 CCKP06307 115 aa15.77■□□□□ 0.11
FOXA1-202ENST00000545425 ATP5EP2Q5VTU8 51 aa15.73■□□□□ 0.11
FOXA1-202ENST00000545425 HIST1H4AP62805 103 aaKnown RBP15.73■□□□□ 0.11
FOXA1-202ENST00000545425 NCR3O14931 201 aa15.72■□□□□ 0.11
FOXA1-202ENST00000545425 ATOX1O00244 68 aa15.71■□□□□ 0.11
FOXA1-202ENST00000545425 C9orf129Q5T035 196 aaKnown RBP15.71■□□□□ 0.11
FOXA1-202ENST00000545425 LINC00575Q6W349 94 aa15.71■□□□□ 0.11
FOXA1-202ENST00000545425 SLPIP03973 132 aa15.71■□□□□ 0.1
FOXA1-202ENST00000545425 UQCRQO14949 82 aa15.7■□□□□ 0.1
FOXA1-202ENST00000545425 GHRHP01286 108 aa15.7■□□□□ 0.1
FOXA1-202ENST00000545425 IGLV6-57P01721 117 aa15.7■□□□□ 0.1
FOXA1-202ENST00000545425 C6orf99Q4VX62 202 aa15.7■□□□□ 0.1
FOXA1-202ENST00000545425 LYPD5Q6UWN5 251 aa15.7■□□□□ 0.1
FOXA1-202ENST00000545425 HTN3P15516 51 aa15.69■□□□□ 0.1
FOXA1-202ENST00000545425 UNQ6190/PRO20217Q6UXQ8 127 aa15.69■□□□□ 0.1
FOXA1-202ENST00000545425 Q8N3U1 123 aa15.69■□□□□ 0.1
FOXA1-202ENST00000545425 LINC00846Q9NV44 126 aa15.69■□□□□ 0.1
FOXA1-202ENST00000545425 KLK12Q9UKR0 248 aa15.69■□□□□ 0.1
FOXA1-202ENST00000545425 PRR3P79522 188 aaKnown RBP15.68■□□□□ 0.1
FOXA1-202ENST00000545425 ENHOQ6UWT2 76 aa15.68■□□□□ 0.1
FOXA1-202ENST00000545425 PRB2P02812 416 aaPredicted RBP15.68■□□□□ 0.1
FOXA1-202ENST00000545425 C9orf116Q5BN46 136 aaPredicted RBP15.68■□□□□ 0.1
FOXA1-202ENST00000545425 F8WDY8 70 aa15.67■□□□□ 0.1
FOXA1-202ENST00000545425 C3orf22Q8N5N4 141 aa15.67■□□□□ 0.1
FOXA1-202ENST00000545425 hADV29S1A0JD25 119 aa15.66■□□□□ 0.1
FOXA1-202ENST00000545425 SS18L2Q9UHA2 77 aa15.66■□□□□ 0.1
FOXA1-202ENST00000545425 ZNF561-AS1K7EIQ3 104 aa15.65■□□□□ 0.1
FOXA1-202ENST00000545425 EGFEM1PQ0D2K5 195 aa15.65■□□□□ 0.1
FOXA1-202ENST00000545425 C10orf25Q5T742 122 aa15.65■□□□□ 0.1
FOXA1-202ENST00000545425 TRBV7-6A0A0J9YX20 115 aa15.64■□□□□ 0.09
FOXA1-202ENST00000545425 PDE6GP18545 87 aa15.64■□□□□ 0.09
FOXA1-202ENST00000545425 MRAPQ8TCY5 172 aa15.64■□□□□ 0.09
FOXA1-202ENST00000545425 LINC00526Q96FQ7 95 aa15.64■□□□□ 0.09
FOXA1-202ENST00000545425 C6orf223Q8N319 242 aa15.62■□□□□ 0.09
FOXA1-202ENST00000545425 TGP01266 2768 aa15.62■□□□□ 0.09
FOXA1-202ENST00000545425 LOC110117498A0A087WWA1 95 aa15.61■□□□□ 0.09
FOXA1-202ENST00000545425 RPL18AQ02543 176 aaKnown RBP15.61■□□□□ 0.09
FOXA1-202ENST00000545425 TRBV10-3A0A0K0K1G6 114 aa15.61■□□□□ 0.09
FOXA1-202ENST00000545425 COX7CP15954 63 aa15.61■□□□□ 0.09
FOXA1-202ENST00000545425 KRTAP10-11P60412 298 aa15.61■□□□□ 0.09
FOXA1-202ENST00000545425 Q8NDZ9 215 aa15.6■□□□□ 0.09
FOXA1-202ENST00000545425 PRKDCP78527 4128 aaKnown RBP15.6■□□□□ 0.09
FOXA1-202ENST00000545425 C2orf48Q96LS8 159 aa15.59■□□□□ 0.09
FOXA1-202ENST00000545425 C6orf48Q9UBA6 75 aa15.59■□□□□ 0.09
FOXA1-202ENST00000545425 DIRC1Q969H9 104 aa15.58■□□□□ 0.08
FOXA1-202ENST00000545425 RBM3P98179 157 aaKnown RBP15.57■□□□□ 0.08
FOXA1-202ENST00000545425 TRAV23DV6A0A075B6W5 121 aa15.57■□□□□ 0.08
FOXA1-202ENST00000545425 C9orf153Q5TBE3 101 aa15.57■□□□□ 0.08
FOXA1-202ENST00000545425 UBL5Q9BZL1 73 aa15.57■□□□□ 0.08
FOXA1-202ENST00000545425 K7EIL1 84 aa15.56■□□□□ 0.08
FOXA1-202ENST00000545425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.55■□□□□ 0.08
FOXA1-202ENST00000545425 IGKV3D-7A0A0C4DH55 119 aa15.53■□□□□ 0.08
FOXA1-202ENST00000545425 CAMK2N2Q96S95 79 aa15.53■□□□□ 0.08
FOXA1-202ENST00000545425 CRYGAP11844 174 aa15.52■□□□□ 0.08
FOXA1-202ENST00000545425 KRTAP26-1Q6PEX3 210 aa15.52■□□□□ 0.08
FOXA1-202ENST00000545425 Q6ZQT0 140 aa15.52■□□□□ 0.07
FOXA1-202ENST00000545425 M0R378 163 aa15.5■□□□□ 0.07
FOXA1-202ENST00000545425 DNAH3Q8TD57 4116 aa15.5■□□□□ 0.07
FOXA1-202ENST00000545425 COX7BP24311 80 aa15.5■□□□□ 0.07
FOXA1-202ENST00000545425 ZNF73O43830 326 aaPredicted RBP15.49■□□□□ 0.07
FOXA1-202ENST00000545425 LINC01556Q5JQF7 62 aa15.49■□□□□ 0.07
FOXA1-202ENST00000545425 SERP2Q8N6R1 65 aa15.49■□□□□ 0.07
FOXA1-202ENST00000545425 LAMTOR3Q9UHA4 124 aa15.49■□□□□ 0.07
FOXA1-202ENST00000545425 WFDC10BQ8IUB3 73 aa15.48■□□□□ 0.07
FOXA1-202ENST00000545425 DSCR8Q96T75 97 aa15.48■□□□□ 0.07
FOXA1-202ENST00000545425 NDUFC2-KCTD14E9PQ53 114 aa15.47■□□□□ 0.07
FOXA1-202ENST00000545425 VPREB1P12018 145 aa15.47■□□□□ 0.07
FOXA1-202ENST00000545425 ELOF1P60002 83 aaKnown RBP15.47■□□□□ 0.07
FOXA1-202ENST00000545425 BCE1O60756 84 aa15.47■□□□□ 0.07
FOXA1-202ENST00000545425 Q6ZQY7 126 aa15.46■□□□□ 0.07
FOXA1-202ENST00000545425 USP17L23D6RBM5 183 aa15.45■□□□□ 0.06
FOXA1-202ENST00000545425 C1orf43Q9BWL3 253 aa15.45■□□□□ 0.06
FOXA1-202ENST00000545425 Q6ZTC4 211 aa15.43■□□□□ 0.06
FOXA1-202ENST00000545425 C15orf56Q8N910 161 aa15.43■□□□□ 0.06
FOXA1-202ENST00000545425 B9D2Q9BPU9 175 aa15.43■□□□□ 0.06
FOXA1-202ENST00000545425 XAGE1AQ9HD64 81 aa15.43■□□□□ 0.06
FOXA1-202ENST00000545425 ESRGQ1W209 222 aa15.4■□□□□ 0.06
FOXA1-202ENST00000545425 HIGD2BQ4VC39 106 aa15.4■□□□□ 0.06
FOXA1-202ENST00000545425 Q6ZRU5 148 aa15.4■□□□□ 0.06
FOXA1-202ENST00000545425 NBEAL2Q6ZNJ1 2754 aa15.38■□□□□ 0.05
FOXA1-202ENST00000545425 RETNQ9HD89 108 aa15.37■□□□□ 0.05
FOXA1-202ENST00000545425 DEFB131BA0A096LNP1 70 aa15.36■□□□□ 0.05
FOXA1-202ENST00000545425 TRBV7-4A0A0J9YYF1 115 aa15.36■□□□□ 0.05
FOXA1-202ENST00000545425 CXCL6P80162 114 aa15.36■□□□□ 0.05
FOXA1-202ENST00000545425 A0A087WVE0 104 aa15.36■□□□□ 0.05
FOXA1-202ENST00000545425 DNAH10OSP0CZ25 163 aa15.36■□□□□ 0.05
FOXA1-202ENST00000545425 C11orf45Q8TAV5 145 aa15.35■□□□□ 0.05
FOXA1-202ENST00000545425 SYCNQ0VAF6 134 aa15.34■□□□□ 0.05
FOXA1-202ENST00000545425 LINC00528Q8N1L1 170 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms