RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HIST3H2BBQ8N257 126 aa4.39□□□□□ -1.71
LPCAT3-209ENST00000540060 A0A1W2PNN7 141 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 FAM168BA1KXE4 195 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 S100A6P06703 90 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 TSPEAR-AS2P59090 65 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 KRTAP10-4P60372 401 aaPredicted RBP4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 KRTDAPP60985 99 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
LPCAT3-209ENST00000540060 LEPROTO15243 131 aa4.37□□□□□ -1.71
LPCAT3-209ENST00000540060 HERVK_113P61574 105 aa4.37□□□□□ -1.71
LPCAT3-209ENST00000540060 KRTAP7-1Q8IUC3 87 aa4.37□□□□□ -1.71
LPCAT3-209ENST00000540060 ERG28Q9UKR5 140 aa4.37□□□□□ -1.71
LPCAT3-209ENST00000540060 PLA2G2DQ9UNK4 145 aa4.37□□□□□ -1.71
LPCAT3-209ENST00000540060 C5orf52A6NGY3 159 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 E9PLD3 99 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 J3QQQ9 107 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 PLA2G1BP04054 148 aaKnown RBP4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 S100A2P29034 98 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 PFN2P35080 140 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 RPL37AP61513 92 aaKnown RBP4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 SNRPEP62304 92 aaKnown RBP4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 COX17Q14061 63 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 FAM19A5Q7Z5A7 132 aaPredicted RBP4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 PLEKHB2Q96CS7 222 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 NDUFA12Q9UI09 145 aa4.36□□□□□ -1.71
LPCAT3-209ENST00000540060 FLG2Q5D862 2391 aaPredicted RBP4.35□□□□□ -1.71
LPCAT3-209ENST00000540060 C20orf202A1L168 122 aa4.35□□□□□ -1.71
LPCAT3-209ENST00000540060 M0QXV9 152 aa4.35□□□□□ -1.71
LPCAT3-209ENST00000540060 HERV-K104P63124 156 aa4.35□□□□□ -1.71
LPCAT3-209ENST00000540060 SERTAD4-AS1Q5TG53 156 aa4.35□□□□□ -1.71
LPCAT3-209ENST00000540060 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
LPCAT3-209ENST00000540060 MYMXA0A1B0GTQ4 84 aa4.34□□□□□ -1.71
LPCAT3-209ENST00000540060 LGALS3P17931 250 aaKnown RBP4.34□□□□□ -1.71
LPCAT3-209ENST00000540060 NMUP48645 174 aa4.34□□□□□ -1.71
LPCAT3-209ENST00000540060 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
LPCAT3-209ENST00000540060 PHF5AQ7RTV0 110 aaKnown RBP4.34□□□□□ -1.71
LPCAT3-209ENST00000540060 SND1-IT1Q9HBX3 110 aa4.34□□□□□ -1.71
LPCAT3-209ENST00000540060 IGLV5-37A0A075B6J1 123 aa4.33□□□□□ -1.72
LPCAT3-209ENST00000540060 IGKV2D-26A0A0A0MRZ7 120 aa4.33□□□□□ -1.72
LPCAT3-209ENST00000540060 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
LPCAT3-209ENST00000540060 AKR1D1P51857 326 aa4.33□□□□□ -1.72
LPCAT3-209ENST00000540060 MEIG1Q5JSS6 88 aa4.33□□□□□ -1.72
LPCAT3-209ENST00000540060 ATOH7Q8N100 152 aa4.33□□□□□ -1.72
LPCAT3-209ENST00000540060 A0A0U1RRA0 63 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 LINC00158P58513 81 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 KRTAP11-1Q8IUC1 163 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 Q8NDZ9 215 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 C22orf24Q9Y442 160 aa4.32□□□□□ -1.72
LPCAT3-209ENST00000540060 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 LINC00587B1AMM8 73 aa4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 VPREB1P12018 145 aa4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 MRPL55Q7Z7F7 128 aaKnown RBP4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 MIR7-3HGQ8N6C7 128 aa4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 TTTY13Q9BZ97 58 aa4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
LPCAT3-209ENST00000540060 ZNF815PA8K554 130 aa4.3□□□□□ -1.72
LPCAT3-209ENST00000540060 UBE2BP63146 152 aa4.3□□□□□ -1.72
LPCAT3-209ENST00000540060 DAND5Q8N907 189 aa4.3□□□□□ -1.72
LPCAT3-209ENST00000540060 NKAPP1Q8N9T2 125 aa4.3□□□□□ -1.72
LPCAT3-209ENST00000540060 LITAFQ99732 161 aa4.3□□□□□ -1.72
LPCAT3-209ENST00000540060 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
LPCAT3-209ENST00000540060 LBHQ53QV2 105 aaPredicted RBP4.29□□□□□ -1.72
LPCAT3-209ENST00000540060 ADAMTSL4-AS1Q5T5F5 129 aa4.29□□□□□ -1.72
LPCAT3-209ENST00000540060 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
LPCAT3-209ENST00000540060 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
LPCAT3-209ENST00000540060 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 GAGE10A6NGK3 116 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 TIMM17BO60830 172 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 SCGB1D1O95968 90 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 RPL24P83731 157 aaKnown RBP4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 C1orf137Q5JT78 98 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 PCP2Q8IVA1 136 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 BOD1L2Q8IYS8 172 aa4.28□□□□□ -1.72
LPCAT3-209ENST00000540060 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 NCR3O14931 201 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 IGLV7-43P04211 117 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 SOSTDC1Q6X4U4 206 aa4.27□□□□□ -1.73
LPCAT3-209ENST00000540060 HSBP1L1C9JCN9 74 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 TMEM238C9JI98 176 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 M0R378 163 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 NPC2P61916 151 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 JOSD1Q15040 202 aaPredicted RBP4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 SPINK6Q6UWN8 80 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 SCGB1D4Q6XE38 83 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 MIEN1Q9BRT3 115 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms