RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 Q9HAA7 133 aa13.7□□□□□ -0.22
SMPDL3A-203ENST00000539041 A0A087WYN8 130 aa13.68□□□□□ -0.22
SMPDL3A-203ENST00000539041 F8WDY8 70 aa13.68□□□□□ -0.22
SMPDL3A-203ENST00000539041 BAALC-AS2P0C853 105 aa13.68□□□□□ -0.22
SMPDL3A-203ENST00000539041 Q6ZRU5 148 aa13.68□□□□□ -0.22
SMPDL3A-203ENST00000539041 UPK3BQ9BT76 320 aa13.66□□□□□ -0.22
SMPDL3A-203ENST00000539041 DNAL4O96015 105 aa13.66□□□□□ -0.22
SMPDL3A-203ENST00000539041 S100A7L2Q5SY68 101 aa13.66□□□□□ -0.22
SMPDL3A-203ENST00000539041 B9D2Q9BPU9 175 aa13.66□□□□□ -0.22
SMPDL3A-203ENST00000539041 CDIP1Q9H305 208 aa13.66□□□□□ -0.22
SMPDL3A-203ENST00000539041 SIGMAR1Q99720 223 aa13.65□□□□□ -0.22
SMPDL3A-203ENST00000539041 LECT2O14960 151 aa13.63□□□□□ -0.23
SMPDL3A-203ENST00000539041 XAGE1AQ9HD64 81 aa13.63□□□□□ -0.23
SMPDL3A-203ENST00000539041 MGAM2Q2M2H8 2515 aa13.62□□□□□ -0.23
SMPDL3A-203ENST00000539041 RMI2Q96E14 147 aa13.62□□□□□ -0.23
SMPDL3A-203ENST00000539041 PCP4P48539 62 aa13.61□□□□□ -0.23
SMPDL3A-203ENST00000539041 RPL18AQ02543 176 aaKnown RBP13.6□□□□□ -0.23
SMPDL3A-203ENST00000539041 SYCNQ0VAF6 134 aa13.6□□□□□ -0.23
SMPDL3A-203ENST00000539041 C22orf24Q9Y442 160 aa13.6□□□□□ -0.23
SMPDL3A-203ENST00000539041 A0A1B0GX51 115 aa13.6□□□□□ -0.23
SMPDL3A-203ENST00000539041 NDUFC2-KCTD14E9PQ53 114 aa13.6□□□□□ -0.23
SMPDL3A-203ENST00000539041 IGLV6-57P01721 117 aa13.59□□□□□ -0.23
SMPDL3A-203ENST00000539041 C6orf99Q4VX62 202 aa13.58□□□□□ -0.24
SMPDL3A-203ENST00000539041 DNAH9Q9NYC9 4486 aa13.57□□□□□ -0.24
SMPDL3A-203ENST00000539041 LINC00167Q96N53 147 aa13.56□□□□□ -0.24
SMPDL3A-203ENST00000539041 VPREB1P12018 145 aa13.55□□□□□ -0.24
SMPDL3A-203ENST00000539041 USP17L23D6RBM5 183 aa13.54□□□□□ -0.24
SMPDL3A-203ENST00000539041 Q8N814 137 aa13.54□□□□□ -0.24
SMPDL3A-203ENST00000539041 ORMDL1Q9P0S3 153 aa13.54□□□□□ -0.24
SMPDL3A-203ENST00000539041 TRBV10-3A0A0K0K1G6 114 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 GAGE2EQ4V326 116 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 CASC10Q5T4H9 136 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 GAGE2DQ9UEU5 116 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 APLNQ9ULZ1 77 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 SLPIP03973 132 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 Q6ZRP5 223 aa13.53□□□□□ -0.24
SMPDL3A-203ENST00000539041 FAM240AA0A1B0GVK7 77 aa13.52□□□□□ -0.25
SMPDL3A-203ENST00000539041 XGP55808 180 aa13.52□□□□□ -0.25
SMPDL3A-203ENST00000539041 SNCGO76070 127 aa13.51□□□□□ -0.25
SMPDL3A-203ENST00000539041 INAFM2P0DMQ5 153 aa13.51□□□□□ -0.25
SMPDL3A-203ENST00000539041 TRAV23DV6A0A075B6W5 121 aa13.5□□□□□ -0.25
SMPDL3A-203ENST00000539041 M0R378 163 aa13.5□□□□□ -0.25
SMPDL3A-203ENST00000539041 TLX1NBP0CAT3 122 aa13.5□□□□□ -0.25
SMPDL3A-203ENST00000539041 LINC00575Q6W349 94 aa13.5□□□□□ -0.25
SMPDL3A-203ENST00000539041 UBE2DNLQ8IWF7 75 aa13.5□□□□□ -0.25
SMPDL3A-203ENST00000539041 DNAH1Q9P2D7 4330 aa13.49□□□□□ -0.25
SMPDL3A-203ENST00000539041 MT-ATP8P03928 68 aa13.49□□□□□ -0.25
SMPDL3A-203ENST00000539041 NHLRC4P0CG21 123 aaPredicted RBP13.49□□□□□ -0.25
SMPDL3A-203ENST00000539041 SCGB1A1P11684 91 aa13.48□□□□□ -0.25
SMPDL3A-203ENST00000539041 DIRC1Q969H9 104 aa13.48□□□□□ -0.25
SMPDL3A-203ENST00000539041 C21orf62-AS1Q17RA5 79 aa13.47□□□□□ -0.25
SMPDL3A-203ENST00000539041 C9orf129Q5T035 196 aaKnown RBP13.47□□□□□ -0.25
SMPDL3A-203ENST00000539041 COL7A1Q02388 2944 aa13.47□□□□□ -0.25
SMPDL3A-203ENST00000539041 ACYP1P07311 99 aa13.45□□□□□ -0.26
SMPDL3A-203ENST00000539041 OBSCN-AS1Q96MR7 158 aa13.45□□□□□ -0.26
SMPDL3A-203ENST00000539041 hADV29S1A0JD25 119 aa13.45□□□□□ -0.26
SMPDL3A-203ENST00000539041 ZNF73O43830 326 aaPredicted RBP13.44□□□□□ -0.26
SMPDL3A-203ENST00000539041 KRTAP1-5Q9BYS1 174 aa13.44□□□□□ -0.26
SMPDL3A-203ENST00000539041 TMEM256-PLSCR3K7ERE1 68 aa13.43□□□□□ -0.26
SMPDL3A-203ENST00000539041 DYNC2H1Q8NCM8 4307 aaKnown RBP13.42□□□□□ -0.26
SMPDL3A-203ENST00000539041 TRBV7-6A0A0J9YX20 115 aa13.42□□□□□ -0.26
SMPDL3A-203ENST00000539041 NUPR2A6NF83 97 aa13.42□□□□□ -0.26
SMPDL3A-203ENST00000539041 KRTAP21-3Q3LHN1 58 aa13.42□□□□□ -0.26
SMPDL3A-203ENST00000539041 COX7BP24311 80 aa13.41□□□□□ -0.26
SMPDL3A-203ENST00000539041 PLA2G2DQ9UNK4 145 aa13.41□□□□□ -0.26
SMPDL3A-203ENST00000539041 NKAPP1Q8N9T2 125 aa13.4□□□□□ -0.26
SMPDL3A-203ENST00000539041 STAB2Q8WWQ8 2551 aa13.4□□□□□ -0.26
SMPDL3A-203ENST00000539041 C14orf132Q9NPU4 83 aa13.4□□□□□ -0.26
SMPDL3A-203ENST00000539041 ELOF1P60002 83 aaKnown RBP13.39□□□□□ -0.27
SMPDL3A-203ENST00000539041 SERTAD4-AS1Q5TG53 156 aa13.38□□□□□ -0.27
SMPDL3A-203ENST00000539041 GAGE2AQ6NT46 116 aa13.37□□□□□ -0.27
SMPDL3A-203ENST00000539041 JMJD7-PLA2G4BH0Y9G9 81 aa13.37□□□□□ -0.27
SMPDL3A-203ENST00000539041 LOC107984640A0A0U1RRK4 108 aa13.36□□□□□ -0.27
SMPDL3A-203ENST00000539041 PSCAO43653 123 aa13.35□□□□□ -0.27
SMPDL3A-203ENST00000539041 IGLV5-37A0A075B6J1 123 aa13.35□□□□□ -0.27
SMPDL3A-203ENST00000539041 GAGE2BQ13066 116 aa13.35□□□□□ -0.27
SMPDL3A-203ENST00000539041 TTC32Q5I0X7 151 aa13.35□□□□□ -0.27
SMPDL3A-203ENST00000539041 C7orf33Q8WU49 177 aa13.35□□□□□ -0.27
SMPDL3A-203ENST00000539041 H3BQ85 93 aa13.34□□□□□ -0.27
SMPDL3A-203ENST00000539041 Q6ZQY7 126 aa13.34□□□□□ -0.27
SMPDL3A-203ENST00000539041 A0A1B0GV72 72 aa13.32□□□□□ -0.28
SMPDL3A-203ENST00000539041 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.32□□□□□ -0.28
SMPDL3A-203ENST00000539041 KCNQ1DNQ9H478 68 aa13.32□□□□□ -0.28
SMPDL3A-203ENST00000539041 LINC00528Q8N1L1 170 aa13.31□□□□□ -0.28
SMPDL3A-203ENST00000539041 FAM168BA1KXE4 195 aa13.3□□□□□ -0.28
SMPDL3A-203ENST00000539041 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
SMPDL3A-203ENST00000539041 SMCR5Q8TEV8 140 aa13.3□□□□□ -0.28
SMPDL3A-203ENST00000539041 CNBPP62633 177 aaKnown RBP13.29□□□□□ -0.28
SMPDL3A-203ENST00000539041 C14orf177Q52M58 125 aa13.28□□□□□ -0.28
SMPDL3A-203ENST00000539041 Q6Q795 121 aa13.28□□□□□ -0.28
SMPDL3A-203ENST00000539041 NBDYA0A0U1RRE5 68 aa13.27□□□□□ -0.28
SMPDL3A-203ENST00000539041 GHRHP01286 108 aa13.27□□□□□ -0.28
SMPDL3A-203ENST00000539041 CCKP06307 115 aa13.27□□□□□ -0.28
SMPDL3A-203ENST00000539041 LINC00643Q86TS7 51 aa13.27□□□□□ -0.29
SMPDL3A-203ENST00000539041 PRYO14603 147 aa13.26□□□□□ -0.29
SMPDL3A-203ENST00000539041 KRTAP7-1Q8IUC3 87 aa13.26□□□□□ -0.29
SMPDL3A-203ENST00000539041 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
SMPDL3A-203ENST00000539041 IGLV1-50A0A075B6I6 118 aa13.24□□□□□ -0.29
SMPDL3A-203ENST00000539041 FAM19A5Q7Z5A7 132 aaPredicted RBP13.24□□□□□ -0.29
SMPDL3A-203ENST00000539041 RBM3P98179 157 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms