RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 TTC32Q5I0X7 151 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 CLPSL2Q6UWE3 100 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 SDIM1Q6ZPB5 146 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 LINC00643Q86TS7 51 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 OR13C6PQ8NH95 151 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 SPATA3Q8NHX4 192 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 ANAPC13Q9BS18 74 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 CELA1Q9UNI1 258 aa3.93□□□□□ -1.78
KNTC1-210ENST00000539013 SETXQ7Z333 2677 aaKnown RBP3.93□□□□□ -1.78
KNTC1-210ENST00000539013 H3BQ85 93 aa3.92□□□□□ -1.78
KNTC1-210ENST00000539013 DEFB4AO15263 64 aa3.92□□□□□ -1.78
KNTC1-210ENST00000539013 SPAG11BQ08648 103 aa3.92□□□□□ -1.78
KNTC1-210ENST00000539013 C11orf68Q9H3H3 251 aaKnown RBP3.92□□□□□ -1.78
KNTC1-210ENST00000539013 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
KNTC1-210ENST00000539013 C22orf24Q9Y442 160 aa3.92□□□□□ -1.78
KNTC1-210ENST00000539013 ACANP16112 2415 aa3.92□□□□□ -1.78
KNTC1-210ENST00000539013 A0A087WYN8 130 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 F8WDY8 70 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 LECT2O14960 151 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 NDUFV3P56181 108 aaKnown RBP3.91□□□□□ -1.78
KNTC1-210ENST00000539013 EGFEM1PQ0D2K5 195 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 LYPD5Q6UWN5 251 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 Q9HAA7 133 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 NOTCH3Q9UM47 2321 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 MTORP42345 2549 aa3.91□□□□□ -1.78
KNTC1-210ENST00000539013 ITPR2Q14571 2701 aa3.9□□□□□ -1.78
KNTC1-210ENST00000539013 IGLV10-54A0A075B6I4 117 aa3.9□□□□□ -1.79
KNTC1-210ENST00000539013 TMEM256-PLSCR3K7ERE1 68 aa3.9□□□□□ -1.79
KNTC1-210ENST00000539013 HTN3P15516 51 aa3.9□□□□□ -1.79
KNTC1-210ENST00000539013 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
KNTC1-210ENST00000539013 ENHOQ6UWT2 76 aa3.9□□□□□ -1.79
KNTC1-210ENST00000539013 KLK12Q9UKR0 248 aa3.9□□□□□ -1.79
KNTC1-210ENST00000539013 JMJD1CQ15652 2540 aa3.89□□□□□ -1.79
KNTC1-210ENST00000539013 HELZ2Q9BYK8 2649 aaKnown RBP3.89□□□□□ -1.79
KNTC1-210ENST00000539013 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
KNTC1-210ENST00000539013 GAGE2AQ6NT46 116 aa3.89□□□□□ -1.79
KNTC1-210ENST00000539013 Q8N814 137 aa3.89□□□□□ -1.79
KNTC1-210ENST00000539013 FASNP49327 2511 aaKnown RBP3.88□□□□□ -1.79
KNTC1-210ENST00000539013 CYSRT1A8MQ03 144 aa3.88□□□□□ -1.79
KNTC1-210ENST00000539013 IGLV6-57P01721 117 aa3.88□□□□□ -1.79
KNTC1-210ENST00000539013 KPRPQ5T749 579 aaPredicted RBP3.88□□□□□ -1.79
KNTC1-210ENST00000539013 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
KNTC1-210ENST00000539013 C2orf48Q96LS8 159 aa3.88□□□□□ -1.79
KNTC1-210ENST00000539013 C2CD3Q4AC94 2353 aa3.88□□□□□ -1.79
KNTC1-210ENST00000539013 TRBV7-6A0A0J9YX20 115 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 CCKP06307 115 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 C9orf116Q5BN46 136 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-210ENST00000539013 Q6JHZ5 121 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 SMCR5Q8TEV8 140 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 C14orf132Q9NPU4 83 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 NIPBLQ6KC79 2804 aaeCLIP3.87□□□□□ -1.79
KNTC1-210ENST00000539013 OTOGQ6ZRI0 2925 aa3.87□□□□□ -1.79
KNTC1-210ENST00000539013 SETD2Q9BYW2 2564 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-210ENST00000539013 hADV29S1A0JD25 119 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 NCR3O14931 201 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 LINC01556Q5JQF7 62 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 KRTAP26-1Q6PEX3 210 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 Q6ZTC4 211 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 C6orf223Q8N319 242 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 C6orf48Q9UBA6 75 aa3.86□□□□□ -1.79
KNTC1-210ENST00000539013 FN1P02751 2386 aaKnown RBP3.85□□□□□ -1.79
KNTC1-210ENST00000539013 NSD1Q96L73 2696 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-210ENST00000539013 FAM236AA0A1B0GUQ0 79 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 FAM236BA0A1B0GV22 79 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 PDE6GP18545 87 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 PRR3P79522 188 aaKnown RBP3.85□□□□□ -1.79
KNTC1-210ENST00000539013 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 WFDC10BQ8IUB3 73 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 C3orf56Q8N813 242 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 DIRC1Q969H9 104 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
KNTC1-210ENST00000539013 NOTCH2Q04721 2471 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 TRAV23DV6A0A075B6W5 121 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 DEFB131BA0A096LNP1 70 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 NDUFC2-KCTD14E9PQ53 114 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 M0R378 163 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.79
KNTC1-210ENST00000539013 KRTAP24-1Q3LI83 254 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 C9orf129Q5T035 196 aaKnown RBP3.84□□□□□ -1.79
KNTC1-210ENST00000539013 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-210ENST00000539013 Q8NDZ9 215 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 C11orf45Q8TAV5 145 aa3.84□□□□□ -1.79
KNTC1-210ENST00000539013 LOC110117498A0A087WWA1 95 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 TRAV10A0A0B4J240 114 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 TRBV10-3A0A0K0K1G6 114 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 ATOX1O00244 68 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 DNAH10OSP0CZ25 163 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 VPREB1P12018 145 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 ELOF1P60002 83 aaKnown RBP3.83□□□□□ -1.8
KNTC1-210ENST00000539013 HIST1H4AP62805 103 aaKnown RBP3.83□□□□□ -1.8
KNTC1-210ENST00000539013 RBM3P98179 157 aaKnown RBP3.83□□□□□ -1.8
KNTC1-210ENST00000539013 ESRGQ1W209 222 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 C15orf56Q8N910 161 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 RETNQ9HD89 108 aa3.83□□□□□ -1.8
KNTC1-210ENST00000539013 LINC00846Q9NV44 126 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms