RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 HSBP1L1C9JCN9 74 aa11.14□□□□□ -0.63
TNFRSF1A-209ENST00000536717 PRR3P79522 188 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-209ENST00000536717 Q6ZRP5 223 aa11.14□□□□□ -0.63
TNFRSF1A-209ENST00000536717 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
TNFRSF1A-209ENST00000536717 GAGE2EQ4V326 116 aa11.13□□□□□ -0.63
TNFRSF1A-209ENST00000536717 GAGE2DQ9UEU5 116 aa11.13□□□□□ -0.63
TNFRSF1A-209ENST00000536717 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
TNFRSF1A-209ENST00000536717 TSTD3H0UI37 97 aa11.12□□□□□ -0.63
TNFRSF1A-209ENST00000536717 PFN2P35080 140 aa11.12□□□□□ -0.63
TNFRSF1A-209ENST00000536717 COX17Q14061 63 aa11.12□□□□□ -0.63
TNFRSF1A-209ENST00000536717 TNXBP22105 4242 aa11.12□□□□□ -0.63
TNFRSF1A-209ENST00000536717 IGKV2D-26A0A0A0MRZ7 120 aa11.11□□□□□ -0.63
TNFRSF1A-209ENST00000536717 ANKRD39Q53RE8 183 aa11.11□□□□□ -0.63
TNFRSF1A-209ENST00000536717 VAMP8Q9BV40 100 aa11.11□□□□□ -0.63
TNFRSF1A-209ENST00000536717 LINC00587B1AMM8 73 aa11.1□□□□□ -0.63
TNFRSF1A-209ENST00000536717 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
TNFRSF1A-209ENST00000536717 PCP4L1A6NKN8 68 aa11.09□□□□□ -0.63
TNFRSF1A-209ENST00000536717 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
TNFRSF1A-209ENST00000536717 MT1HL1P0DM35 61 aa11.08□□□□□ -0.64
TNFRSF1A-209ENST00000536717 LINC00158P58513 81 aa11.08□□□□□ -0.64
TNFRSF1A-209ENST00000536717 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
TNFRSF1A-209ENST00000536717 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
TNFRSF1A-209ENST00000536717 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
TNFRSF1A-209ENST00000536717 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
TNFRSF1A-209ENST00000536717 TTTY13Q9BZ97 58 aa11.05□□□□□ -0.64
TNFRSF1A-209ENST00000536717 A0A0J9YXY3 114 aa11.04□□□□□ -0.64
TNFRSF1A-209ENST00000536717 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-209ENST00000536717 PRO1933Q9H354 126 aa11.04□□□□□ -0.64
TNFRSF1A-209ENST00000536717 PAM16Q9Y3D7 125 aa11.04□□□□□ -0.64
TNFRSF1A-209ENST00000536717 PHF5AQ7RTV0 110 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-209ENST00000536717 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
TNFRSF1A-209ENST00000536717 DDTP30046 118 aa11.03□□□□□ -0.64
TNFRSF1A-209ENST00000536717 SPATA45Q537H7 98 aa11.03□□□□□ -0.64
TNFRSF1A-209ENST00000536717 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
TNFRSF1A-209ENST00000536717 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
TNFRSF1A-209ENST00000536717 SRSF9Q13242 221 aaKnown RBP eCLIP11.02□□□□□ -0.65
TNFRSF1A-209ENST00000536717 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
TNFRSF1A-209ENST00000536717 SCGB1D4Q6XE38 83 aa11.02□□□□□ -0.65
TNFRSF1A-209ENST00000536717 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
TNFRSF1A-209ENST00000536717 PSORS1C2Q9UIG4 136 aa11.01□□□□□ -0.65
TNFRSF1A-209ENST00000536717 SPINK6Q6UWN8 80 aa11□□□□□ -0.65
TNFRSF1A-209ENST00000536717 KRTAP7-1Q8IUC3 87 aa11□□□□□ -0.65
TNFRSF1A-209ENST00000536717 FAM19A5Q7Z5A7 132 aaPredicted RBP10.99□□□□□ -0.65
TNFRSF1A-209ENST00000536717 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
TNFRSF1A-209ENST00000536717 TIMM17BO60830 172 aa10.99□□□□□ -0.65
TNFRSF1A-209ENST00000536717 DAND5Q8N907 189 aa10.98□□□□□ -0.65
TNFRSF1A-209ENST00000536717 LINC01600Q96MT4 127 aa10.98□□□□□ -0.65
TNFRSF1A-209ENST00000536717 UQCR10Q9UDW1 63 aa10.98□□□□□ -0.65
TNFRSF1A-209ENST00000536717 KRTAP11-1Q8IUC1 163 aa10.97□□□□□ -0.65
TNFRSF1A-209ENST00000536717 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
TNFRSF1A-209ENST00000536717 TMEM238C9JI98 176 aa10.96□□□□□ -0.65
TNFRSF1A-209ENST00000536717 M0QXV9 152 aa10.95□□□□□ -0.66
TNFRSF1A-209ENST00000536717 COX8AP10176 69 aa10.95□□□□□ -0.66
TNFRSF1A-209ENST00000536717 RPL24P83731 157 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-209ENST00000536717 C1orf137Q5JT78 98 aa10.95□□□□□ -0.66
TNFRSF1A-209ENST00000536717 ADAMTSL4-AS1Q5T5F5 129 aa10.95□□□□□ -0.66
TNFRSF1A-209ENST00000536717 LITAFQ99732 161 aa10.94□□□□□ -0.66
TNFRSF1A-209ENST00000536717 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
TNFRSF1A-209ENST00000536717 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
TNFRSF1A-209ENST00000536717 REG3GQ6UW15 175 aa10.93□□□□□ -0.66
TNFRSF1A-209ENST00000536717 C14orf144Q96I85 54 aa10.93□□□□□ -0.66
TNFRSF1A-209ENST00000536717 C22orf24Q9Y442 160 aa10.93□□□□□ -0.66
TNFRSF1A-209ENST00000536717 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
TNFRSF1A-209ENST00000536717 DLEU1O43261 78 aa10.92□□□□□ -0.66
TNFRSF1A-209ENST00000536717 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
TNFRSF1A-209ENST00000536717 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
TNFRSF1A-209ENST00000536717 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
TNFRSF1A-209ENST00000536717 VPREB1P12018 145 aa10.91□□□□□ -0.66
TNFRSF1A-209ENST00000536717 NPC2P61916 151 aa10.91□□□□□ -0.66
TNFRSF1A-209ENST00000536717 LBHQ53QV2 105 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-209ENST00000536717 Q6ZVH6 145 aa10.9□□□□□ -0.66
TNFRSF1A-209ENST00000536717 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-209ENST00000536717 SPANXDQ9BXN6 97 aa10.9□□□□□ -0.66
TNFRSF1A-209ENST00000536717 SPANXCQ9NY87 97 aa10.9□□□□□ -0.66
TNFRSF1A-209ENST00000536717 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
TNFRSF1A-209ENST00000536717 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
TNFRSF1A-209ENST00000536717 LINC00308Q8TCZ7 52 aa10.89□□□□□ -0.67
TNFRSF1A-209ENST00000536717 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
TNFRSF1A-209ENST00000536717 KRTAP10-8P60410 259 aa10.89□□□□□ -0.67
TNFRSF1A-209ENST00000536717 UBE2BP63146 152 aa10.89□□□□□ -0.67
TNFRSF1A-209ENST00000536717 SOSTDC1Q6X4U4 206 aa10.88□□□□□ -0.67
TNFRSF1A-209ENST00000536717 Q8NDZ9 215 aa10.88□□□□□ -0.67
TNFRSF1A-209ENST00000536717 IFITM1P13164 125 aa10.87□□□□□ -0.67
TNFRSF1A-209ENST00000536717 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-209ENST00000536717 UBR4Q5T4S7 5183 aa10.86□□□□□ -0.67
TNFRSF1A-209ENST00000536717 GAGE10A6NGK3 116 aa10.85□□□□□ -0.67
TNFRSF1A-209ENST00000536717 EIF4EBP3O60516 100 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-209ENST00000536717 NDUFC2O95298 119 aa10.85□□□□□ -0.67
TNFRSF1A-209ENST00000536717 LINC00167Q96N53 147 aa10.85□□□□□ -0.67
TNFRSF1A-209ENST00000536717 M0R378 163 aa10.84□□□□□ -0.67
TNFRSF1A-209ENST00000536717 NCR3O14931 201 aa10.84□□□□□ -0.67
TNFRSF1A-209ENST00000536717 PPDPFQ9H3Y8 114 aa10.84□□□□□ -0.67
TNFRSF1A-209ENST00000536717 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
TNFRSF1A-209ENST00000536717 M0R143 59 aa10.83□□□□□ -0.68
TNFRSF1A-209ENST00000536717 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
TNFRSF1A-209ENST00000536717 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
TNFRSF1A-209ENST00000536717 HIGD1BQ9P298 99 aa10.83□□□□□ -0.68
TNFRSF1A-209ENST00000536717 TRBV10-2A0A0K0K1G8 114 aa10.82□□□□□ -0.68
TNFRSF1A-209ENST00000536717 CTAG1AP78358 180 aa10.82□□□□□ -0.68
TNFRSF1A-209ENST00000536717 H0Y9J4 135 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms