RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, human

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-208	ENST00000536582		A0A096LNI7	61 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582		A0A0J9YXY3	114 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582	HERV-K104	P63124	156 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582	S100A12	P80511	92 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582		Q6ZRP5	223 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582	DPH3	Q96FX2	82 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582	FAM30A	Q9NZY2	134 aa		6.2	□□□□□ -1.42
PAAF1-208	ENST00000536582	PANO1	I0J062	215 aa		6.19	□□□□□ -1.42
PAAF1-208	ENST00000536582	SFTA2	Q6UW10	78 aa		6.19	□□□□□ -1.42
PAAF1-208	ENST00000536582	SCGB1D4	Q6XE38	83 aa		6.19	□□□□□ -1.42
PAAF1-208	ENST00000536582	DAND5	Q8N907	189 aa		6.19	□□□□□ -1.42
PAAF1-208	ENST00000536582	XAGE1A	Q9HD64	81 aa		6.19	□□□□□ -1.42
PAAF1-208	ENST00000536582	HECTD4	Q9Y4D8	3996 aa		6.19	□□□□□ -1.42
PAAF1-208	ENST00000536582	DNAH11	Q96DT5	4516 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	NDUFC2-KCTD14	E9PQ53	114 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	SMIM6	P0DI80	62 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	COX8A	P10176	69 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	PTTG1IP	P53801	180 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	NPC2	P61916	151 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	HAMP	P81172	84 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	ADAMTSL4-AS1	Q5T5F5	129 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	PRO1933	Q9H354	126 aa		6.18	□□□□□ -1.42
PAAF1-208	ENST00000536582	TLX1NB	P0CAT3	122 aa		6.17	□□□□□ -1.42
PAAF1-208	ENST00000536582	CIRBP	Q14011	172 aa	Known RBP	6.17	□□□□□ -1.42
PAAF1-208	ENST00000536582	MIR7-3HG	Q8N6C7	128 aa		6.17	□□□□□ -1.42
PAAF1-208	ENST00000536582	C12orf57	Q99622	126 aa		6.17	□□□□□ -1.42
PAAF1-208	ENST00000536582	SND1-IT1	Q9HBX3	110 aa		6.17	□□□□□ -1.42
PAAF1-208	ENST00000536582	COX17	Q14061	63 aa		6.16	□□□□□ -1.42
PAAF1-208	ENST00000536582	C9orf129	Q5T035	196 aa	Known RBP	6.16	□□□□□ -1.42
PAAF1-208	ENST00000536582	SLC25A34	Q6PIV7	304 aa		6.16	□□□□□ -1.42
PAAF1-208	ENST00000536582	BOD1L2	Q8IYS8	172 aa		6.16	□□□□□ -1.42
PAAF1-208	ENST00000536582	FAM168B	A1KXE4	195 aa		6.15	□□□□□ -1.42
PAAF1-208	ENST00000536582	LINC00587	B1AMM8	73 aa		6.15	□□□□□ -1.42
PAAF1-208	ENST00000536582	LITAF	Q99732	161 aa		6.15	□□□□□ -1.42
PAAF1-208	ENST00000536582	PKIG	Q9Y2B9	76 aa		6.15	□□□□□ -1.42
PAAF1-208	ENST00000536582		A0A1W2PNN7	141 aa		6.14	□□□□□ -1.43
PAAF1-208	ENST00000536582	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.14	□□□□□ -1.43
PAAF1-208	ENST00000536582		A0A087WYN8	130 aa		6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	DLEU1	O43261	78 aa		6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	TIMM17B	O60830	172 aa		6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	SOSTDC1	Q6X4U4	206 aa		6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	LINC00518	Q8N0U6	118 aa		6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	SPACA4	Q8TDM5	124 aa		6.13	□□□□□ -1.43
PAAF1-208	ENST00000536582	TMEM238	C9JI98	176 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582	PKHD1	P08F94	4074 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582	PRR3	P79522	188 aa	Known RBP	6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582	SERTAD4-AS1	Q5TG53	156 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582	C2orf91	Q6ZV80	131 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582	SCX	Q7RTU7	201 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582		Q8NDZ9	215 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582	LINC00474	Q9P2X8	69 aa		6.12	□□□□□ -1.43
PAAF1-208	ENST00000536582		Q6ZSA8	131 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	KRTAP7-1	Q8IUC3	87 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	MUSTN1	Q8IVN3	82 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	CIRBP-AS1	Q8TBR5	109 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	LINC00308	Q8TCZ7	52 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	HIST1H4G	Q99525	98 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	MIEN1	Q9BRT3	115 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	UQCR10	Q9UDW1	63 aa		6.11	□□□□□ -1.43
PAAF1-208	ENST00000536582	DNAH5	Q8TE73	4624 aa		6.1	□□□□□ -1.43
PAAF1-208	ENST00000536582	SPANXD	Q9BXN6	97 aa		6.1	□□□□□ -1.43
PAAF1-208	ENST00000536582	SPANXC	Q9NY87	97 aa		6.1	□□□□□ -1.43
PAAF1-208	ENST00000536582	GAGE10	A6NGK3	116 aa		6.09	□□□□□ -1.43
PAAF1-208	ENST00000536582	NCR3	O14931	201 aa		6.09	□□□□□ -1.43
PAAF1-208	ENST00000536582	HNRNPA3	P51991	378 aa	Known RBP	6.09	□□□□□ -1.43
PAAF1-208	ENST00000536582	XG	P55808	180 aa		6.09	□□□□□ -1.43
PAAF1-208	ENST00000536582	PHF5A	Q7RTV0	110 aa	Known RBP	6.09	□□□□□ -1.43
PAAF1-208	ENST00000536582	HIGD1B	Q9P298	99 aa		6.09	□□□□□ -1.43
PAAF1-208	ENST00000536582		M0QXV9	152 aa		6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	SMR3B	P02814	79 aa	Predicted RBP	6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	VPREB1	P12018	145 aa		6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	RPL24	P83731	157 aa	Known RBP	6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	NKAPP1	Q8N9T2	125 aa		6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	PLAC8	Q9NZF1	115 aa		6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	C22orf24	Q9Y442	160 aa		6.08	□□□□□ -1.44
PAAF1-208	ENST00000536582	TSTD3	H0UI37	97 aa		6.07	□□□□□ -1.44
PAAF1-208	ENST00000536582	IFITM1	P13164	125 aa		6.07	□□□□□ -1.44
PAAF1-208	ENST00000536582		Q6ZVH6	145 aa		6.07	□□□□□ -1.44
PAAF1-208	ENST00000536582	DYNC1H1	Q14204	4646 aa	Known RBP	6.06	□□□□□ -1.44
PAAF1-208	ENST00000536582	LOC107984156	A0A0G2JMH3	177 aa		6.06	□□□□□ -1.44
PAAF1-208	ENST00000536582	RPL37AP8	A6NKH3	93 aa		6.06	□□□□□ -1.44
PAAF1-208	ENST00000536582	ARL17A	Q8IVW1	177 aa		6.06	□□□□□ -1.44
PAAF1-208	ENST00000536582	C7orf33	Q8WU49	177 aa		6.06	□□□□□ -1.44
PAAF1-208	ENST00000536582		A4D1N5	150 aa		6.05	□□□□□ -1.44
PAAF1-208	ENST00000536582	UBE2B	P63146	152 aa		6.05	□□□□□ -1.44
PAAF1-208	ENST00000536582	CTAG1A	P78358	180 aa		6.05	□□□□□ -1.44
PAAF1-208	ENST00000536582	MRPL55	Q7Z7F7	128 aa	Known RBP	6.05	□□□□□ -1.44
PAAF1-208	ENST00000536582	COPS9	Q8WXC6	57 aa		6.05	□□□□□ -1.44
PAAF1-208	ENST00000536582	LINC00167	Q96N53	147 aa		6.05	□□□□□ -1.44
PAAF1-208	ENST00000536582	EPPK1	P58107	5090 aa	Known RBP	6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	IGLV5-37	A0A075B6J1	123 aa		6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	IGKV2-28	A0A075B6P5	120 aa		6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	KRTAP23-1	A1A580	65 aa		6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582		M0R378	163 aa		6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	IGKV2D-28	P01615	120 aa		6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	HSD52	Q0P140	79 aa		6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	LBH	Q53QV2	105 aa	Predicted RBP	6.04	□□□□□ -1.44
PAAF1-208	ENST00000536582	KRTAP11-1	Q8IUC1	163 aa		6.04	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms