RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	TMEM223	A0PJW6	202 aa		5.08	□□□□□ -1.6
PUM1-223	ENST00000532678	LINC00474	Q9P2X8	69 aa		5.08	□□□□□ -1.6
PUM1-223	ENST00000532678	UBR4	Q5T4S7	5183 aa		5.08	□□□□□ -1.6
PUM1-223	ENST00000532678		A0A087WYN8	130 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	SYS1-DBNDD2	H3BUS1	97 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	DPM2	O94777	84 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	TLX1NB	P0CAT3	122 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	PLN	P26678	52 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	C9orf116	Q5BN46	136 aa	Predicted RBP	5.07	□□□□□ -1.6
PUM1-223	ENST00000532678		Q6ZRP5	223 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	STPG4	Q8N801	248 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	DPH3	Q96FX2	82 aa		5.07	□□□□□ -1.6
PUM1-223	ENST00000532678	NDUFC2-KCTD14	E9PQ53	114 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	SCGB1D1	O95968	90 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	IGKC	P01834	107 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	S100A6	P06703	90 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	KRTDAP	P60985	99 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	GAGE2E	Q4V326	116 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	PLAC8	Q9NZF1	115 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	GAGE2D	Q9UEU5	116 aa		5.06	□□□□□ -1.6
PUM1-223	ENST00000532678	OXT	P01178	125 aa		5.05	□□□□□ -1.6
PUM1-223	ENST00000532678	C3orf79	P0CE67	100 aa		5.05	□□□□□ -1.6
PUM1-223	ENST00000532678	HIST3H2BB	Q8N257	126 aa		5.05	□□□□□ -1.6
PUM1-223	ENST00000532678	S100A2	P29034	98 aa		5.04	□□□□□ -1.6
PUM1-223	ENST00000532678	HERVK_113	P61574	105 aa		5.04	□□□□□ -1.6
PUM1-223	ENST00000532678	SERTAD4-AS1	Q5TG53	156 aa		5.04	□□□□□ -1.6
PUM1-223	ENST00000532678	LINC01545	Q5VT33	79 aa		5.04	□□□□□ -1.6
PUM1-223	ENST00000532678	PET117	Q6UWS5	81 aa		5.04	□□□□□ -1.6
PUM1-223	ENST00000532678	ZNF625	Q96I27	306 aa	Predicted RBP	5.04	□□□□□ -1.6
PUM1-223	ENST00000532678		A0A1W2PNN7	141 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	FAM168B	A1KXE4	195 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	MT1HL1	P0DM35	61 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	TSPEAR-AS2	P59090	65 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	C9orf129	Q5T035	196 aa	Known RBP	5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	SFTA2	Q6UW10	78 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	HIST1H2BL	Q99880	126 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	ERG28	Q9UKR5	140 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	TNXB	P22105	4242 aa		5.03	□□□□□ -1.6
PUM1-223	ENST00000532678	C20orf202	A1L168	122 aa		5.02	□□□□□ -1.61
PUM1-223	ENST00000532678	LEPROT	O15243	131 aa		5.02	□□□□□ -1.61
PUM1-223	ENST00000532678	PFN2	P35080	140 aa		5.02	□□□□□ -1.61
PUM1-223	ENST00000532678	SNRPE	P62304	92 aa	Known RBP	5.02	□□□□□ -1.61
PUM1-223	ENST00000532678	C7orf33	Q8WU49	177 aa		5.02	□□□□□ -1.61
PUM1-223	ENST00000532678	PLEKHB2	Q96CS7	222 aa		5.02	□□□□□ -1.61
PUM1-223	ENST00000532678	XAGE1A	Q9HD64	81 aa		5.02	□□□□□ -1.61
PUM1-223	ENST00000532678		J3QQQ9	107 aa		5.01	□□□□□ -1.61
PUM1-223	ENST00000532678	LGALS3	P17931	250 aa	Known RBP	5.01	□□□□□ -1.61
PUM1-223	ENST00000532678	MEIG1	Q5JSS6	88 aa		5.01	□□□□□ -1.61
PUM1-223	ENST00000532678	NDUFA12	Q9UI09	145 aa		5.01	□□□□□ -1.61
PUM1-223	ENST00000532678	MYMX	A0A1B0GTQ4	84 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678	C5orf52	A6NGY3	159 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678		E9PLD3	99 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678		M0QXV9	152 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678	HERV-K104	P63124	156 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678	COX17	Q14061	63 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678	PHF5A	Q7RTV0	110 aa	Known RBP	5	□□□□□ -1.61
PUM1-223	ENST00000532678	KRTAP7-1	Q8IUC3	87 aa		5	□□□□□ -1.61
PUM1-223	ENST00000532678		A0A0U1RRA0	63 aa		4.99	□□□□□ -1.61
PUM1-223	ENST00000532678	PRY	O14603	147 aa		4.99	□□□□□ -1.61
PUM1-223	ENST00000532678	LINC00158	P58513	81 aa		4.99	□□□□□ -1.61
PUM1-223	ENST00000532678	ATOH7	Q8N100	152 aa		4.99	□□□□□ -1.61
PUM1-223	ENST00000532678	LRP2	P98164	4655 aa		4.99	□□□□□ -1.61
PUM1-223	ENST00000532678	SMIM13	P0DJ93	91 aa		4.98	□□□□□ -1.61
PUM1-223	ENST00000532678	NMU	P48645	174 aa		4.98	□□□□□ -1.61
PUM1-223	ENST00000532678	PRR3	P79522	188 aa	Known RBP	4.98	□□□□□ -1.61
PUM1-223	ENST00000532678	SND1-IT1	Q9HBX3	110 aa		4.98	□□□□□ -1.61
PUM1-223	ENST00000532678	IGKV2D-26	A0A0A0MRZ7	120 aa		4.97	□□□□□ -1.61
PUM1-223	ENST00000532678	AKR1D1	P51857	326 aa		4.97	□□□□□ -1.61
PUM1-223	ENST00000532678	UBE2B	P63146	152 aa		4.97	□□□□□ -1.61
PUM1-223	ENST00000532678	MIR7-3HG	Q8N6C7	128 aa		4.97	□□□□□ -1.61
PUM1-223	ENST00000532678	TTTY13	Q9BZ97	58 aa		4.97	□□□□□ -1.61
PUM1-223	ENST00000532678	LINC00587	B1AMM8	73 aa		4.96	□□□□□ -1.62
PUM1-223	ENST00000532678	MRPL55	Q7Z7F7	128 aa	Known RBP	4.96	□□□□□ -1.62
PUM1-223	ENST00000532678	KRTAP11-1	Q8IUC1	163 aa		4.96	□□□□□ -1.62
PUM1-223	ENST00000532678	NKAPP1	Q8N9T2	125 aa		4.96	□□□□□ -1.62
PUM1-223	ENST00000532678	MPLKIP	Q8TAP9	179 aa		4.96	□□□□□ -1.62
PUM1-223	ENST00000532678	C22orf24	Q9Y442	160 aa		4.96	□□□□□ -1.62
PUM1-223	ENST00000532678	IGLV5-37	A0A075B6J1	123 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678		A0A0J9YXY3	114 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	GAGE10	A6NGK3	116 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	ZNF815P	A8K554	130 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	VPREB1	P12018	145 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	DAND5	Q8N907	189 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678		Q8NDZ9	215 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	TP73-AS1	Q9UF72	201 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	PSORS1C2	Q9UIG4	136 aa		4.95	□□□□□ -1.62
PUM1-223	ENST00000532678	RPL24	P83731	157 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-223	ENST00000532678	LBH	Q53QV2	105 aa	Predicted RBP	4.94	□□□□□ -1.62
PUM1-223	ENST00000532678	C1orf137	Q5JT78	98 aa		4.94	□□□□□ -1.62
PUM1-223	ENST00000532678	HSBP1L1	C9JCN9	74 aa		4.93	□□□□□ -1.62
PUM1-223	ENST00000532678	BOD1L2	Q8IYS8	172 aa		4.93	□□□□□ -1.62
PUM1-223	ENST00000532678		Q8N9P0	234 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-223	ENST00000532678	LINC00167	Q96N53	147 aa		4.93	□□□□□ -1.62
PUM1-223	ENST00000532678	MIEN1	Q9BRT3	115 aa		4.93	□□□□□ -1.62
PUM1-223	ENST00000532678	RPL37AP8	A6NKH3	93 aa		4.92	□□□□□ -1.62
PUM1-223	ENST00000532678	NCR3	O14931	201 aa		4.92	□□□□□ -1.62
PUM1-223	ENST00000532678	TIMM17B	O60830	172 aa		4.92	□□□□□ -1.62
PUM1-223	ENST00000532678	NPC2	P61916	151 aa		4.92	□□□□□ -1.62
PUM1-223	ENST00000532678	ADAMTSL4-AS1	Q5T5F5	129 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms