RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
PCF11-205ENST00000530906 TRAV10A0A0B4J240 114 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 H3BQ85 93 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 DNAL4O96015 105 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 INAFM2P0DMQ5 153 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 PFN2P35080 140 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 SPAG11BQ08648 103 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 LINC01556Q5JQF7 62 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 LINC00337Q8N6G1 96 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 C11orf45Q8TAV5 145 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 CLEC2BQ92478 149 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 C2orf48Q96LS8 159 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 KLK12Q9UKR0 248 aa3.76□□□□□ -1.81
PCF11-205ENST00000530906 TENM1Q9UKZ4 2725 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 VWFP04275 2813 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 DEFB131BA0A096LNP1 70 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 CLPSL2Q6UWE3 100 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 ENHOQ6UWT2 76 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 Q6ZTC4 211 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 SMIM11BQ8TCY0 68 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 TM2D3Q9BRN9 247 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 CUBNO60494 3623 aa3.75□□□□□ -1.81
PCF11-205ENST00000530906 IGLV10-54A0A075B6I4 117 aa3.74□□□□□ -1.81
PCF11-205ENST00000530906 DNAH10OSP0CZ25 163 aa3.74□□□□□ -1.81
PCF11-205ENST00000530906 C1orf43Q9BWL3 253 aa3.74□□□□□ -1.81
PCF11-205ENST00000530906 TEX49A0A1B0GTD5 131 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 CYSRT1A8MQ03 144 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 BAALC-AS2P0C853 105 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 C21orf62-AS1Q17RA5 79 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 OR13C6PQ8NH95 151 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 RMI2Q96E14 147 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 RETNQ9HD89 108 aa3.73□□□□□ -1.81
PCF11-205ENST00000530906 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 ESRGQ1W209 222 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 S100A7L2Q5SY68 101 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 Q6Q795 121 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 WFDC10BQ8IUB3 73 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 LINC00167Q96N53 147 aa3.72□□□□□ -1.81
PCF11-205ENST00000530906 JMJD7-PLA2G4BH0Y9G9 81 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 IGLV6-57P01721 117 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 NANOS2P60321 138 aaKnown RBP3.71□□□□□ -1.82
PCF11-205ENST00000530906 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 CAMK2N2Q96S95 79 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 UPK3BQ9BT76 320 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 IMUPQ9GZP8 106 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 ORMDL1Q9P0S3 153 aa3.71□□□□□ -1.82
PCF11-205ENST00000530906 FLNBO75369 2602 aaKnown RBP3.71□□□□□ -1.82
PCF11-205ENST00000530906 NDUFC2-KCTD14E9PQ53 114 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 TMEM256-PLSCR3K7ERE1 68 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 LECT2O14960 151 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 C15orf56Q8N910 161 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 OBSCN-AS1Q96MR7 158 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 C6orf48Q9UBA6 75 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 NBEAL2Q6ZNJ1 2754 aa3.7□□□□□ -1.82
PCF11-205ENST00000530906 A0A087WYN8 130 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 A0A1B0GV72 72 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 K7EIL1 84 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 M0R378 163 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 TLX1NBP0CAT3 122 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 XGP55808 180 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 C10orf25Q5T742 122 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 SDIM1Q6ZPB5 146 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 LINC00643Q86TS7 51 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 Q8N814 137 aa3.69□□□□□ -1.82
PCF11-205ENST00000530906 MAST4O15021 2626 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 IGKV2D-24A0A075B6R9 120 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 MT-ATP8P03928 68 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 PDE6GP18545 87 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 C6orf99Q4VX62 202 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 C9orf116Q5BN46 136 aaPredicted RBP3.68□□□□□ -1.82
PCF11-205ENST00000530906 LINC00575Q6W349 94 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 C6orf223Q8N319 242 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 DIRC1Q969H9 104 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
PCF11-205ENST00000530906 STAB1Q9NY15 2570 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 TRAV23DV6A0A075B6W5 121 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 TRBV7-7A0A0K0K1E9 115 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 hADV29S1A0JD25 119 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 NCR3O14931 201 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 VPREB1P12018 145 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 RPL18AQ02543 176 aaKnown RBP3.67□□□□□ -1.82
PCF11-205ENST00000530906 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
PCF11-205ENST00000530906 MRAPQ8TCY5 172 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 Q9HAA7 133 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 PKIGQ9Y2B9 76 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 C22orf24Q9Y442 160 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 LINC00588Q9Y4M8 146 aa3.67□□□□□ -1.82
PCF11-205ENST00000530906 BAHCC1Q9P281 2608 aa3.66□□□□□ -1.82
PCF11-205ENST00000530906 IGLV5-37A0A075B6J1 123 aa3.66□□□□□ -1.82
PCF11-205ENST00000530906 ZNF73O43830 326 aaPredicted RBP3.66□□□□□ -1.82
PCF11-205ENST00000530906 NHLRC4P0CG21 123 aaPredicted RBP3.66□□□□□ -1.82
PCF11-205ENST00000530906 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
PCF11-205ENST00000530906 Q6ZRU5 148 aa3.66□□□□□ -1.82
PCF11-205ENST00000530906 B9D2Q9BPU9 175 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms