RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 SPRR2FQ96RM1 72 aa0.53□□□□□ -2.32
RNU4ATAC11P-201ENST00000515939 C20orf78Q9BR46 151 aa0.53□□□□□ -2.32
RNU4ATAC11P-201ENST00000515939 GNB1LQ9BYB4 327 aa0.53□□□□□ -2.32
RNU4ATAC11P-201ENST00000515939 SPANXA1Q9NS26 97 aa0.53□□□□□ -2.32
RNU4ATAC11P-201ENST00000515939 GNG13Q9P2W3 67 aa0.53□□□□□ -2.32
RNU4ATAC11P-201ENST00000515939 DSTQ03001 7570 aaKnown RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 FXYD6-FXYD2A0A087WZ82 144 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TGIF2-C20orf24A0A0A6YYL0 155 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LOC107984156A0A0G2JMH3 177 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 A0A0U1RRA0 63 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LOC389332A0A1B0GUA5 103 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 A0A1B0GVG6 124 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LINC01546A6NGU7 62 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 A6NN06 94 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PRYO14603 147 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 NCR3O14931 201 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 SRP19P09132 144 aaKnown RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 NPSP0C0P6 89 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ZNF22P17026 224 aaPredicted RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 SPRR2DP22532 72 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 FCER1GP30273 86 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 IFI27P40305 119 aaPredicted RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 SMCPP49901 116 aaPredicted RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TSPEAR-AS2P59090 65 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CKS1BP61024 79 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 RPL23P62829 140 aaKnown RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 MT1XP80297 61 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 C4orf48Q5BLP8 95 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PDZD11Q5EBL8 140 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CT83Q5H943 113 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LCE1DQ5T752 114 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 KRTAP5-7Q6L8G8 165 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TEX261Q6UWH6 196 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ALKAL2Q6UX46 152 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 Q6ZRX8 168 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ARL17AQ8IVW1 177 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 NKAPP1Q8N9T2 125 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 SPRR2GQ9BYE4 73 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CST9LQ9H4G1 147 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 GEMIN7Q9H840 131 aaKnown RBP0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 OSTCQ9NRP0 149 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ERG28Q9UKR5 140 aa0.52□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 BORCS7-ASMTA0A0B4J1R7 106 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TINCRA0A1B0GVN0 87 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 C20orf202A1L168 122 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 XKRY2A2RUG3 117 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LINC00862A6NCI5 91 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 C11orf86A6NJI1 115 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 HMSDA8MTL9 139 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 UMAD1C9J7I0 102 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TEX46H3BTG2 121 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PDE6DO43924 150 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PFDN1O60925 122 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PET100P0DJ07 73 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 SMIM13P0DJ93 91 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 IGLC3P0DOY3 106 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CKS2P33552 79 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 HERVK_113P63121 156 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CD164Q04900 197 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ZNF345Q14585 488 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ADAMTSL4-AS1Q5T5F5 129 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 MRPL54Q6P161 138 aaKnown RBP0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TEX43Q6ZNM6 134 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TMEM136Q6ZRR5 245 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LINC00299Q6ZSB3 139 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 FAM19A2Q8N3H0 131 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 Q8N8P6 123 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TOMM6Q96B49 74 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PRELID3AQ96N28 172 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 Q96NJ1 140 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TIMM17AQ99595 171 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 KRTAP4-6Q9BYQ5 205 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 VCX2Q9H322 139 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 RPS10P5Q9NQ39 176 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 MANBALQ9NQG1 85 aa0.51□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 IGLV5-48A0A075B6I7 105 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TMEM223A0PJW6 202 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TMEM250H0YL14 139 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TAGLN2P37802 199 aaKnown RBP0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CXCL5P42830 114 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 RIGQ13278 110 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 C9orf153Q5TBE3 101 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 KRTAP5-3Q6L8H2 238 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ERASQ7Z444 233 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 AKAP14Q86UN6 197 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 BOD1L2Q8IYS8 172 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 MIR7-3HGQ8N6C7 128 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TMEM18Q96B42 140 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LITAFQ99732 161 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 SMIM7Q9BQ49 75 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 LINC00846Q9NV44 126 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 NAT8BQ9UHF3 227 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 NDUFA12Q9UI09 145 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 CYSLTR1Q9Y271 337 aa0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ZNF706Q9Y5V0 76 aaPredicted RBP0.5□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 TRAV9-1A0A075B6T8 112 aa0.49□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 ETDCA0A1B0GVM5 59 aa0.49□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PPP1R17O96001 155 aa0.49□□□□□ -2.33
RNU4ATAC11P-201ENST00000515939 PPBPP02775 128 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms