RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 RPL24P83731 157 aaKnown RBP5.14□□□□□ -1.59
NEDD4-210ENST00000513957 C9orf116Q5BN46 136 aaPredicted RBP5.14□□□□□ -1.59
NEDD4-210ENST00000513957 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
NEDD4-210ENST00000513957 FAM19A2Q8N3H0 131 aa5.14□□□□□ -1.59
NEDD4-210ENST00000513957 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
NEDD4-210ENST00000513957 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BKO60814 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 SCO1O75880 301 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BJP06899 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BOP23527 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 PLNP26678 52 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BBP33778 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BDP58876 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BCP62807 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 COX17Q14061 63 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST2H2BEQ16778 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.13□□□□□ -1.59
NEDD4-210ENST00000513957 TMEM170BQ5T4T1 132 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 Q6ZVQ6 151 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BHQ93079 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BNQ99877 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 HIST1H2BMQ99879 126 aa5.13□□□□□ -1.59
NEDD4-210ENST00000513957 PRR3P79522 188 aaKnown RBP5.12□□□□□ -1.59
NEDD4-210ENST00000513957 SRRM2Q9UQ35 2752 aaKnown RBP5.11□□□□□ -1.59
NEDD4-210ENST00000513957 IGLV5-37A0A075B6J1 123 aa5.11□□□□□ -1.59
NEDD4-210ENST00000513957 A0A1W2PNN7 141 aa5.11□□□□□ -1.59
NEDD4-210ENST00000513957 TMEM223A0PJW6 202 aa5.11□□□□□ -1.59
NEDD4-210ENST00000513957 COA6Q5JTJ3 125 aaKnown RBP5.11□□□□□ -1.59
NEDD4-210ENST00000513957 MAP1LC3CQ9BXW4 147 aa5.11□□□□□ -1.59
NEDD4-210ENST00000513957 TP73-AS1Q9UF72 201 aa5.11□□□□□ -1.59
NEDD4-210ENST00000513957 KRTAP29-1A8MX34 341 aaPredicted RBP5.1□□□□□ -1.59
NEDD4-210ENST00000513957 LINC00587B1AMM8 73 aa5.1□□□□□ -1.59
NEDD4-210ENST00000513957 OXTP01178 125 aa5.1□□□□□ -1.59
NEDD4-210ENST00000513957 C9orf129Q5T035 196 aaKnown RBP5.1□□□□□ -1.59
NEDD4-210ENST00000513957 IGLV9-49A0A0B4J1Y8 123 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 M0QXV9 152 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 NUPR1O60356 82 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 DPM2O94777 84 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 HERVK_113P61574 105 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 CTAG1AP78358 180 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 VAMP3Q15836 100 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 ZNF625Q96I27 306 aaPredicted RBP5.09□□□□□ -1.59
NEDD4-210ENST00000513957 ERG28Q9UKR5 140 aa5.09□□□□□ -1.59
NEDD4-210ENST00000513957 IGKCP01834 107 aa5.08□□□□□ -1.6
NEDD4-210ENST00000513957 FABP4P15090 132 aa5.08□□□□□ -1.6
NEDD4-210ENST00000513957 AKR1D1P51857 326 aa5.08□□□□□ -1.6
NEDD4-210ENST00000513957 SPINK6Q6UWN8 80 aa5.08□□□□□ -1.6
NEDD4-210ENST00000513957 FAM19A5Q7Z5A7 132 aaPredicted RBP5.08□□□□□ -1.6
NEDD4-210ENST00000513957 FLG2Q5D862 2391 aaPredicted RBP5.08□□□□□ -1.6
NEDD4-210ENST00000513957 FAM168BA1KXE4 195 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 SYS1-DBNDD2H3BUS1 97 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 NMUP48645 174 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 PHF5AQ7RTV0 110 aaKnown RBP5.07□□□□□ -1.6
NEDD4-210ENST00000513957 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 PLEKHB2Q96CS7 222 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 XAGE1AQ9HD64 81 aa5.07□□□□□ -1.6
NEDD4-210ENST00000513957 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
NEDD4-210ENST00000513957 MYMXA0A1B0GTQ4 84 aa5.06□□□□□ -1.6
NEDD4-210ENST00000513957 LEPROTO15243 131 aa5.06□□□□□ -1.6
NEDD4-210ENST00000513957 UBE2BP63146 152 aa5.06□□□□□ -1.6
NEDD4-210ENST00000513957 MRPL55Q7Z7F7 128 aaKnown RBP5.06□□□□□ -1.6
NEDD4-210ENST00000513957 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
NEDD4-210ENST00000513957 PFN2P35080 140 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 HNRNPA3P51991 378 aaKnown RBP5.05□□□□□ -1.6
NEDD4-210ENST00000513957 LINC01545Q5VT33 79 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 REG3GQ6UW15 175 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 KRTAP7-1Q8IUC3 87 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 SND1-IT1Q9HBX3 110 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 NDUFA12Q9UI09 145 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 C22orf24Q9Y442 160 aa5.05□□□□□ -1.6
NEDD4-210ENST00000513957 C20orf202A1L168 122 aa5.04□□□□□ -1.6
NEDD4-210ENST00000513957 E9PLD3 99 aa5.04□□□□□ -1.6
NEDD4-210ENST00000513957 J3QQQ9 107 aa5.04□□□□□ -1.6
NEDD4-210ENST00000513957 C1orf137Q5JT78 98 aa5.04□□□□□ -1.6
NEDD4-210ENST00000513957 NKAPP1Q8N9T2 125 aa5.04□□□□□ -1.6
NEDD4-210ENST00000513957 PKHD1L1Q86WI1 4243 aa5.04□□□□□ -1.6
NEDD4-210ENST00000513957 DMBT1Q9UGM3 2413 aaPredicted RBP5.04□□□□□ -1.6
NEDD4-210ENST00000513957 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
NEDD4-210ENST00000513957 LGALS3P17931 250 aaKnown RBP5.03□□□□□ -1.6
NEDD4-210ENST00000513957 LINC00158P58513 81 aa5.03□□□□□ -1.6
NEDD4-210ENST00000513957 MEIG1Q5JSS6 88 aa5.03□□□□□ -1.6
NEDD4-210ENST00000513957 IGKV2D-26A0A0A0MRZ7 120 aa5.02□□□□□ -1.61
NEDD4-210ENST00000513957 C3orf79P0CE67 100 aa5.02□□□□□ -1.61
NEDD4-210ENST00000513957 DIRC1Q969H9 104 aa5.02□□□□□ -1.61
NEDD4-210ENST00000513957 PMCHL2Q9BQD1 86 aa5.02□□□□□ -1.61
NEDD4-210ENST00000513957 LOC107984156A0A0G2JMH3 177 aa5.01□□□□□ -1.61
NEDD4-210ENST00000513957 S100A2P29034 98 aa5.01□□□□□ -1.61
NEDD4-210ENST00000513957 TSPEAR-AS2P59090 65 aa5.01□□□□□ -1.61
NEDD4-210ENST00000513957 ARL17AQ8IVW1 177 aa5.01□□□□□ -1.61
NEDD4-210ENST00000513957 LINC01600Q96MT4 127 aa5.01□□□□□ -1.61
NEDD4-210ENST00000513957 ZNF861PO60384 105 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 BCE1O60756 84 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 SMIM13P0DJ93 91 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 KRTDAPP60985 99 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 LCE4AQ5TA78 99 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 MIR7-3HGQ8N6C7 128 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 LINC00167Q96N53 147 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 MIEN1Q9BRT3 115 aa5□□□□□ -1.61
NEDD4-210ENST00000513957 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms