RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 DOPEY2Q9Y3R5 2298 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 DOT1LQ8TEK3 1739 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 MROH1Q8NDA8 1641 aa0.46□□□□□ -2.34
RNF4-219ENST00000513450 DIP2AQ14689 1571 aa0.45□□□□□ -2.34
RNF4-219ENST00000513450 ASXL1Q8IXJ9 1541 aa0.45□□□□□ -2.34
RNF4-219ENST00000513450 LRRC7Q96NW7 1537 aa0.45□□□□□ -2.34
RNF4-219ENST00000513450 CACNA1HO95180 2353 aa0.45□□□□□ -2.34
RNF4-219ENST00000513450 FMN2Q9NZ56 1722 aa0.45□□□□□ -2.34
RNF4-219ENST00000513450 IFI27P40305 119 aaPredicted RBP0.45□□□□□ -2.34
RNF4-219ENST00000513450 USF3Q68DE3 2245 aa0.45□□□□□ -2.34
RNF4-219ENST00000513450 POLR1AO95602 1720 aaPredicted RBP0.44□□□□□ -2.34
RNF4-219ENST00000513450 TIAM2Q8IVF5 1701 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 MEGF8Q7Z7M0 2845 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 NKTRP30414 1462 aaKnown RBP0.44□□□□□ -2.34
RNF4-219ENST00000513450 C2CD3Q4AC94 2353 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 A0A087WXM4 84 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 TP53AIP1Q9HCN2 124 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 KIAA0556O60303 1618 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 PAPPAQ13219 1627 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 ABCA9Q8IUA7 1624 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 BCORQ6W2J9 1755 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 CDC42BPGQ6DT37 1551 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 FRAS1Q86XX4 4008 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 INO80Q9ULG1 1556 aaPredicted RBP0.44□□□□□ -2.34
RNF4-219ENST00000513450 SETBP1Q9Y6X0 1596 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 A0A0G2JMZ2 1700 aa0.44□□□□□ -2.34
RNF4-219ENST00000513450 PARP4Q9UKK3 1724 aaKnown RBP0.44□□□□□ -2.34
RNF4-219ENST00000513450 URB2Q14146 1524 aaKnown RBP0.43□□□□□ -2.34
RNF4-219ENST00000513450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.43□□□□□ -2.347e-7■■■□□ 17.5
RNF4-219ENST00000513450 FXYD6-FXYD2A0A087WZ82 144 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 A0A0D9SFI3 127 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 LCE6AA0A183 80 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 H3BVH4 76 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 COX8AP10176 69 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 COX7BP24311 80 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 ATP5EP2Q5VTU8 51 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 WFDC9Q8NEX5 89 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 GAFA1Q96PS6 74 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 CNFNQ9BYD5 112 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 WIZO95785 1651 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 TSC2P49815 1807 aa0.43□□□□□ -2.34
RNF4-219ENST00000513450 COL14A1Q05707 1796 aaKnown RBP0.42□□□□□ -2.34
RNF4-219ENST00000513450 QSER1Q2KHR3 1735 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 K7EQZ3 153 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 C3orf79P0CE67 100 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 FXYD6P3P58550 94 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 NREPQ16612 68 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 LELP1Q5T871 98 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 DEFB123Q8N688 67 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 TNCP24821 2201 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 EFCAB5A4FU69 1503 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 USP24Q9UPU5 2620 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 CACNA1EQ15878 2313 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 BSNQ9UPA5 3926 aa0.42□□□□□ -2.34
RNF4-219ENST00000513450 RICTORQ6R327 1708 aa0.41□□□□□ -2.34
RNF4-219ENST00000513450 F8P00451 2351 aa0.41□□□□□ -2.34
RNF4-219ENST00000513450 PTPRZ1P23471 2315 aaPredicted RBP0.41□□□□□ -2.34
RNF4-219ENST00000513450 A0A087WWC5 75 aa0.41□□□□□ -2.34
RNF4-219ENST00000513450 COX6A2Q02221 97 aa0.41□□□□□ -2.34
RNF4-219ENST00000513450 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
RNF4-219ENST00000513450 RALGAPBQ86X10 1494 aa0.41□□□□□ -2.34
RNF4-219ENST00000513450 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
RNF4-219ENST00000513450 GLI2P10070 1586 aa0.4□□□□□ -2.34
RNF4-219ENST00000513450 CFAP43Q8NDM7 1665 aa0.4□□□□□ -2.34
RNF4-219ENST00000513450 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 LMTK2Q8IWU2 1503 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 PTPRQQ9UMZ3 2332 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 CPSF4LA6NMK7 179 aaKnown RBP0.4□□□□□ -2.35
RNF4-219ENST00000513450 PRO0255Q9UI72 69 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 LRRC37AA6NMS7 1700 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 NRAPQ86VF7 1730 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 PLCH1Q4KWH8 1693 aa0.4□□□□□ -2.35
RNF4-219ENST00000513450 HFM1A2PYH4 1435 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 NESP48681 1621 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 CICQ96RK0 1608 aaPredicted RBP0.39□□□□□ -2.35
RNF4-219ENST00000513450 EIF2AK4Q9P2K8 1649 aaKnown RBP0.39□□□□□ -2.35
RNF4-219ENST00000513450 CNOT1A5YKK6 2376 aaKnown RBP0.39□□□□□ -2.35
RNF4-219ENST00000513450 PKD1L2Q7Z442 2459 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 PIEZO2Q9H5I5 2752 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 NDUFB1O75438 58 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 SFTA3P0C7M3 94 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 SPRR1AP35321 89 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 ENHOQ6UWT2 76 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 S100ZQ8WXG8 99 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 PREX1Q8TCU6 1659 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 POLQO75417 2590 aa0.39□□□□□ -2.35
RNF4-219ENST00000513450 ABCA6Q8N139 1617 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 CCDC180Q9P1Z9 1646 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 TJP1Q07157 1748 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 SPTBN1Q01082 2364 aaKnown RBP0.38□□□□□ -2.35
RNF4-219ENST00000513450 KIF1AQ12756 1690 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 THOC2Q8NI27 1593 aaKnown RBP0.38□□□□□ -2.35
RNF4-219ENST00000513450 SPTY2D1-AS1A0A0U1RR47 76 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 NDUFA4O00483 81 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 KRTAP2-3P0C7H8 128 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 ATXN8Q156A1 80 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 PIGYQ3MUY2 71 aa0.38□□□□□ -2.35
RNF4-219ENST00000513450 KRTAP19-3Q7Z4W3 81 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms