RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 SERTAD4-AS1Q5TG53 156 aa6.06□□□□□ -1.44
SFXN1-205ENST00000506963 ARL17AQ8IVW1 177 aa6.06□□□□□ -1.44
SFXN1-205ENST00000506963 SRRM2Q9UQ35 2752 aaKnown RBP6.05□□□□□ -1.44
SFXN1-205ENST00000506963 M0QXV9 152 aa6.05□□□□□ -1.44
SFXN1-205ENST00000506963 SMIM13P0DJ93 91 aa6.05□□□□□ -1.44
SFXN1-205ENST00000506963 LINC00158P58513 81 aa6.05□□□□□ -1.44
SFXN1-205ENST00000506963 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
SFXN1-205ENST00000506963 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
SFXN1-205ENST00000506963 MEIG1Q5JSS6 88 aa6.05□□□□□ -1.44
SFXN1-205ENST00000506963 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
SFXN1-205ENST00000506963 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
SFXN1-205ENST00000506963 PRR3P79522 188 aaKnown RBP6.04□□□□□ -1.44
SFXN1-205ENST00000506963 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
SFXN1-205ENST00000506963 ATOH7Q8N100 152 aa6.04□□□□□ -1.44
SFXN1-205ENST00000506963 C22orf24Q9Y442 160 aa6.04□□□□□ -1.44
SFXN1-205ENST00000506963 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
SFXN1-205ENST00000506963 TIMM17BO60830 172 aa6.03□□□□□ -1.44
SFXN1-205ENST00000506963 VPREB1P12018 145 aa6.03□□□□□ -1.44
SFXN1-205ENST00000506963 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
SFXN1-205ENST00000506963 LBHQ53QV2 105 aaPredicted RBP6.03□□□□□ -1.44
SFXN1-205ENST00000506963 MIR7-3HGQ8N6C7 128 aa6.03□□□□□ -1.44
SFXN1-205ENST00000506963 VPS13BQ7Z7G8 4022 aa6.02□□□□□ -1.45
SFXN1-205ENST00000506963 A0A0U1RRA0 63 aa6.02□□□□□ -1.45
SFXN1-205ENST00000506963 ZNF815PA8K554 130 aa6.02□□□□□ -1.45
SFXN1-205ENST00000506963 MRPL55Q7Z7F7 128 aaKnown RBP6.02□□□□□ -1.45
SFXN1-205ENST00000506963 LITAFQ99732 161 aa6.02□□□□□ -1.45
SFXN1-205ENST00000506963 FLG2Q5D862 2391 aaPredicted RBP6.02□□□□□ -1.45
SFXN1-205ENST00000506963 SCGB1D1O95968 90 aa6.01□□□□□ -1.45
SFXN1-205ENST00000506963 JOSD1Q15040 202 aaPredicted RBP6.01□□□□□ -1.45
SFXN1-205ENST00000506963 KRTAP11-1Q8IUC1 163 aa6.01□□□□□ -1.45
SFXN1-205ENST00000506963 Q8NDZ9 215 aa6.01□□□□□ -1.45
SFXN1-205ENST00000506963 TTTY13Q9BZ97 58 aa6.01□□□□□ -1.45
SFXN1-205ENST00000506963 PSORS1C2Q9UIG4 136 aa6.01□□□□□ -1.45
SFXN1-205ENST00000506963 HSBP1L1C9JCN9 74 aa6□□□□□ -1.45
SFXN1-205ENST00000506963 INAFM2P0DMQ5 153 aa6□□□□□ -1.45
SFXN1-205ENST00000506963 ADAMTSL4-AS1Q5T5F5 129 aa6□□□□□ -1.45
SFXN1-205ENST00000506963 NKAPP1Q8N9T2 125 aa6□□□□□ -1.45
SFXN1-205ENST00000506963 LINC00167Q96N53 147 aa6□□□□□ -1.45
SFXN1-205ENST00000506963 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
SFXN1-205ENST00000506963 SRSF9Q13242 221 aaKnown RBP eCLIP5.99□□□□□ -1.45
SFXN1-205ENST00000506963 PCP2Q8IVA1 136 aa5.99□□□□□ -1.45
SFXN1-205ENST00000506963 TMA7Q9Y2S6 64 aaKnown RBP5.99□□□□□ -1.45
SFXN1-205ENST00000506963 PCLOQ9Y6V0 5065 aa5.98□□□□□ -1.45
SFXN1-205ENST00000506963 NDUFC2O95298 119 aa5.98□□□□□ -1.45
SFXN1-205ENST00000506963 HNRNPA3P51991 378 aaKnown RBP5.98□□□□□ -1.45
SFXN1-205ENST00000506963 UBE2BP63146 152 aa5.98□□□□□ -1.45
SFXN1-205ENST00000506963 LCE2CQ5TA81 110 aa5.98□□□□□ -1.45
SFXN1-205ENST00000506963 BOD1L2Q8IYS8 172 aa5.98□□□□□ -1.45
SFXN1-205ENST00000506963 DAND5Q8N907 189 aa5.98□□□□□ -1.45
SFXN1-205ENST00000506963 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 TRBV10-2A0A0K0K1G8 114 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 M0R378 163 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 C1orf137Q5JT78 98 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 SOSTDC1Q6X4U4 206 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 Q6ZVH6 145 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 MIEN1Q9BRT3 115 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 SPANXCQ9NY87 97 aa5.97□□□□□ -1.45
SFXN1-205ENST00000506963 DLEU1O43261 78 aa5.96□□□□□ -1.46
SFXN1-205ENST00000506963 EIF4EBP3O60516 100 aaPredicted RBP5.96□□□□□ -1.46
SFXN1-205ENST00000506963 SPINK6Q6UWN8 80 aa5.96□□□□□ -1.46
SFXN1-205ENST00000506963 SCGB1D4Q6XE38 83 aa5.96□□□□□ -1.46
SFXN1-205ENST00000506963 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
SFXN1-205ENST00000506963 RPL37AP8A6NKH3 93 aa5.95□□□□□ -1.46
SFXN1-205ENST00000506963 COX8AP10176 69 aa5.95□□□□□ -1.46
SFXN1-205ENST00000506963 IFITM1P13164 125 aa5.95□□□□□ -1.46
SFXN1-205ENST00000506963 PYY3Q5JQD4 70 aa5.95□□□□□ -1.46
SFXN1-205ENST00000506963 SPANXB1Q9NS25 103 aaPredicted RBP5.95□□□□□ -1.46
SFXN1-205ENST00000506963 BCE1O60756 84 aa5.94□□□□□ -1.46
SFXN1-205ENST00000506963 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
SFXN1-205ENST00000506963 IGKV2-28A0A075B6P5 120 aa5.93□□□□□ -1.46
SFXN1-205ENST00000506963 ZNF861PO60384 105 aa5.93□□□□□ -1.46
SFXN1-205ENST00000506963 IGKV2D-28P01615 120 aa5.93□□□□□ -1.46
SFXN1-205ENST00000506963 KRTAP13-1Q8IUC0 172 aa5.93□□□□□ -1.46
SFXN1-205ENST00000506963 VAMP8Q9BV40 100 aa5.93□□□□□ -1.46
SFXN1-205ENST00000506963 KCNQ1DNQ9H478 68 aa5.93□□□□□ -1.46
SFXN1-205ENST00000506963 KRTAP29-1A8MX34 341 aaPredicted RBP5.92□□□□□ -1.46
SFXN1-205ENST00000506963 PRYO14603 147 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 NCR3O14931 201 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 IGLV6-57P01721 117 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 SPRR1AP35321 89 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 SPATA45Q537H7 98 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 TMEM126AQ9H061 195 aa5.92□□□□□ -1.46
SFXN1-205ENST00000506963 TRBV10-3A0A0K0K1G6 114 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 H0Y9J4 135 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 OXTP01178 125 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 RPL28P46779 137 aaKnown RBP5.91□□□□□ -1.46
SFXN1-205ENST00000506963 NPC2P61916 151 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 LINC00518Q8N0U6 118 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 PAM16Q9Y3D7 125 aa5.91□□□□□ -1.46
SFXN1-205ENST00000506963 DMBT1Q9UGM3 2413 aaPredicted RBP5.91□□□□□ -1.46
SFXN1-205ENST00000506963 KRTAP4-16G5E9R7 235 aaPredicted RBP5.9□□□□□ -1.46
SFXN1-205ENST00000506963 DDTP30046 118 aa5.9□□□□□ -1.46
SFXN1-205ENST00000506963 MUSTN1Q8IVN3 82 aa5.9□□□□□ -1.46
SFXN1-205ENST00000506963 LINC00337Q8N6G1 96 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms