RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PLNP26678 52 aa4.55□□□□□ -1.68
GYPB-206ENST00000506516 TMEM223A0PJW6 202 aa4.54□□□□□ -1.68
GYPB-206ENST00000506516 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
GYPB-206ENST00000506516 COX17Q14061 63 aa4.54□□□□□ -1.68
GYPB-206ENST00000506516 FAM168BA1KXE4 195 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 LINC00587B1AMM8 73 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 DPM2O94777 84 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 IGKCP01834 107 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 PFN2P35080 140 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 HERVK_113P61574 105 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
GYPB-206ENST00000506516 PHF5AQ7RTV0 110 aaKnown RBP4.53□□□□□ -1.68
GYPB-206ENST00000506516 FAM19A5Q7Z5A7 132 aaPredicted RBP4.53□□□□□ -1.68
GYPB-206ENST00000506516 XAGE1AQ9HD64 81 aa4.53□□□□□ -1.68
GYPB-206ENST00000506516 UBE2BP63146 152 aa4.52□□□□□ -1.69
GYPB-206ENST00000506516 PRR3P79522 188 aaKnown RBP4.52□□□□□ -1.69
GYPB-206ENST00000506516 LBHQ53QV2 105 aaPredicted RBP4.52□□□□□ -1.69
GYPB-206ENST00000506516 COA6Q5JTJ3 125 aaKnown RBP4.52□□□□□ -1.69
GYPB-206ENST00000506516 ZNF625Q96I27 306 aaPredicted RBP4.52□□□□□ -1.69
GYPB-206ENST00000506516 ERG28Q9UKR5 140 aa4.52□□□□□ -1.69
GYPB-206ENST00000506516 MYMXA0A1B0GTQ4 84 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 SYS1-DBNDD2H3BUS1 97 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 M0QXV9 152 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 LINC00158P58513 81 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 HERV-K104P63124 156 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 PET117Q6UWS5 81 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 PMCHL2Q9BQD1 86 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 C22orf24Q9Y442 160 aa4.51□□□□□ -1.69
GYPB-206ENST00000506516 LEPROTO15243 131 aa4.5□□□□□ -1.69
GYPB-206ENST00000506516 OXTP01178 125 aa4.5□□□□□ -1.69
GYPB-206ENST00000506516 RPL24P83731 157 aaKnown RBP4.5□□□□□ -1.69
GYPB-206ENST00000506516 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
GYPB-206ENST00000506516 C1orf137Q5JT78 98 aa4.5□□□□□ -1.69
GYPB-206ENST00000506516 KRTAP29-1A8MX34 341 aaPredicted RBP4.49□□□□□ -1.69
GYPB-206ENST00000506516 J3QQQ9 107 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 S100A6P06703 90 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
GYPB-206ENST00000506516 HNRNPA3P51991 378 aaKnown RBP4.49□□□□□ -1.69
GYPB-206ENST00000506516 KRTDAPP60985 99 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 SERTAD4-AS1Q5TG53 156 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 SPINK6Q6UWN8 80 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 MRPL55Q7Z7F7 128 aaKnown RBP4.49□□□□□ -1.69
GYPB-206ENST00000506516 KRTAP7-1Q8IUC3 87 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 SND1-IT1Q9HBX3 110 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 TP73-AS1Q9UF72 201 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 NDUFA12Q9UI09 145 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
GYPB-206ENST00000506516 C20orf202A1L168 122 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 PRYO14603 147 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 C3orf79P0CE67 100 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 S100A2P29034 98 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 PCP4P48539 62 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 NMUP48645 174 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 AKR1D1P51857 326 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 SRSF9Q13242 221 aaKnown RBP eCLIP4.48□□□□□ -1.69
GYPB-206ENST00000506516 LINC01545Q5VT33 79 aa4.48□□□□□ -1.69
GYPB-206ENST00000506516 IGLV5-37A0A075B6J1 123 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 A0A0U1RRA0 63 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 E9PLD3 99 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 IGLV7-43P04211 117 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 SMIM13P0DJ93 91 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 REG3GQ6UW15 175 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
GYPB-206ENST00000506516 FAT3Q8TDW7 4589 aa4.46□□□□□ -1.69
GYPB-206ENST00000506516 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
GYPB-206ENST00000506516 MIR7-3HGQ8N6C7 128 aa4.46□□□□□ -1.7
GYPB-206ENST00000506516 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
GYPB-206ENST00000506516 PKHD1L1Q86WI1 4243 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 VPREB1P12018 145 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 TSPEAR-AS2P59090 65 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 KRTAP11-1Q8IUC1 163 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 HIST3H2BBQ8N257 126 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
GYPB-206ENST00000506516 BCE1O60756 84 aa4.44□□□□□ -1.7
GYPB-206ENST00000506516 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
GYPB-206ENST00000506516 BOD1L2Q8IYS8 172 aa4.44□□□□□ -1.7
GYPB-206ENST00000506516 MIEN1Q9BRT3 115 aa4.44□□□□□ -1.7
GYPB-206ENST00000506516 HERC1Q15751 4861 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 IGKV2-28A0A075B6P5 120 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 IGKV2D-26A0A0A0MRZ7 120 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 A0A0J9YXY3 114 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 M0R378 163 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 ZNF861PO60384 105 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 IGKV2D-28P01615 120 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 RPL28P46779 137 aaKnown RBP4.43□□□□□ -1.7
GYPB-206ENST00000506516 SNRPEP62304 92 aaKnown RBP4.43□□□□□ -1.7
GYPB-206ENST00000506516 LINC01600Q96MT4 127 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 HIST1H2BLQ99880 126 aa4.43□□□□□ -1.7
GYPB-206ENST00000506516 LOC107984156A0A0G2JMH3 177 aa4.42□□□□□ -1.7
GYPB-206ENST00000506516 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
GYPB-206ENST00000506516 H0Y9J4 135 aa4.42□□□□□ -1.7
GYPB-206ENST00000506516 S100A12P80511 92 aa4.42□□□□□ -1.7
GYPB-206ENST00000506516 ARL17AQ8IVW1 177 aa4.42□□□□□ -1.7
GYPB-206ENST00000506516 HSBP1L1C9JCN9 74 aa4.41□□□□□ -1.7
GYPB-206ENST00000506516 TIMM17BO60830 172 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms