RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 NMUP48645 174 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 C6orf226Q5I0X4 101 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
NR1I3-222ENST00000506018 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 SPATA45Q537H7 98 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 SPINK6Q6UWN8 80 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 Q8IZM0 81 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
NR1I3-222ENST00000506018 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
NR1I3-222ENST00000506018 J3QQQ9 107 aa6.5□□□□□ -1.37
NR1I3-222ENST00000506018 CKS1BP61024 79 aa6.5□□□□□ -1.37
NR1I3-222ENST00000506018 C12orf57Q99622 126 aa6.5□□□□□ -1.37
NR1I3-222ENST00000506018 MYMXA0A1B0GTQ4 84 aa6.49□□□□□ -1.37
NR1I3-222ENST00000506018 MT1HL1P0DM35 61 aa6.48□□□□□ -1.37
NR1I3-222ENST00000506018 HERV-K104P63124 156 aa6.48□□□□□ -1.37
NR1I3-222ENST00000506018 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
NR1I3-222ENST00000506018 LINC01600Q96MT4 127 aa6.48□□□□□ -1.37
NR1I3-222ENST00000506018 A0A1W2PNN7 141 aa6.47□□□□□ -1.37
NR1I3-222ENST00000506018 TLX1NBP0CAT3 122 aa6.47□□□□□ -1.37
NR1I3-222ENST00000506018 LINC00518Q8N0U6 118 aa6.47□□□□□ -1.37
NR1I3-222ENST00000506018 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
NR1I3-222ENST00000506018 TRBV30A0A0K0K1B3 111 aa6.46□□□□□ -1.37
NR1I3-222ENST00000506018 ZNF815PA8K554 130 aa6.46□□□□□ -1.37
NR1I3-222ENST00000506018 TSTD3H0UI37 97 aa6.46□□□□□ -1.37
NR1I3-222ENST00000506018 DLEU1O43261 78 aa6.46□□□□□ -1.37
NR1I3-222ENST00000506018 COX8AP10176 69 aa6.46□□□□□ -1.37
NR1I3-222ENST00000506018 SLC25A34Q6PIV7 304 aa6.46□□□□□ -1.37
NR1I3-222ENST00000506018 IGKV2D-26A0A0A0MRZ7 120 aa6.45□□□□□ -1.38
NR1I3-222ENST00000506018 UNQ6190/PRO20217Q6UXQ8 127 aa6.45□□□□□ -1.38
NR1I3-222ENST00000506018 SCGB1D4Q6XE38 83 aa6.45□□□□□ -1.38
NR1I3-222ENST00000506018 SRSF9Q13242 221 aaKnown RBP eCLIP6.44□□□□□ -1.38
NR1I3-222ENST00000506018 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 GAGE2EQ4V326 116 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 C1orf137Q5JT78 98 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 BOD1L2Q8IYS8 172 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 C6orf48Q9UBA6 75 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 UQCR10Q9UDW1 63 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 GAGE2DQ9UEU5 116 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 PSORS1C2Q9UIG4 136 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 COX17Q14061 63 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 MEIG1Q5JSS6 88 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 PHF5AQ7RTV0 110 aaKnown RBP6.44□□□□□ -1.38
NR1I3-222ENST00000506018 PCP2Q8IVA1 136 aa6.44□□□□□ -1.38
NR1I3-222ENST00000506018 TMEM238C9JI98 176 aa6.43□□□□□ -1.38
NR1I3-222ENST00000506018 NDUFC2-KCTD14E9PQ53 114 aa6.43□□□□□ -1.38
NR1I3-222ENST00000506018 TSPEAR-AS2P59090 65 aa6.43□□□□□ -1.38
NR1I3-222ENST00000506018 FAM19A5Q7Z5A7 132 aaPredicted RBP6.43□□□□□ -1.38
NR1I3-222ENST00000506018 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
NR1I3-222ENST00000506018 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
NR1I3-222ENST00000506018 TIMM17BO60830 172 aa6.42□□□□□ -1.38
NR1I3-222ENST00000506018 UBE2BP63146 152 aa6.42□□□□□ -1.38
NR1I3-222ENST00000506018 Q6ZVH6 145 aa6.42□□□□□ -1.38
NR1I3-222ENST00000506018 DIRC1Q969H9 104 aa6.42□□□□□ -1.38
NR1I3-222ENST00000506018 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
NR1I3-222ENST00000506018 M0QXV9 152 aa6.41□□□□□ -1.38
NR1I3-222ENST00000506018 C2orf82Q6UX34 121 aa6.41□□□□□ -1.38
NR1I3-222ENST00000506018 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
NR1I3-222ENST00000506018 HIGD1BQ9P298 99 aa6.41□□□□□ -1.38
NR1I3-222ENST00000506018 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
NR1I3-222ENST00000506018 FAM168BA1KXE4 195 aa6.4□□□□□ -1.39
NR1I3-222ENST00000506018 IGLV7-43P04211 117 aa6.4□□□□□ -1.39
NR1I3-222ENST00000506018 LINC00158P58513 81 aa6.4□□□□□ -1.39
NR1I3-222ENST00000506018 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
NR1I3-222ENST00000506018 KRTAP10-8P60410 259 aa6.39□□□□□ -1.39
NR1I3-222ENST00000506018 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
NR1I3-222ENST00000506018 PRO1933Q9H354 126 aa6.39□□□□□ -1.39
NR1I3-222ENST00000506018 PFN2P35080 140 aa6.38□□□□□ -1.39
NR1I3-222ENST00000506018 SPANXB1Q9NS25 103 aaPredicted RBP6.38□□□□□ -1.39
NR1I3-222ENST00000506018 SMIM13P0DJ93 91 aa6.37□□□□□ -1.39
NR1I3-222ENST00000506018 IFITM1P13164 125 aa6.37□□□□□ -1.39
NR1I3-222ENST00000506018 TAL2Q16559 108 aa6.37□□□□□ -1.39
NR1I3-222ENST00000506018 LBHQ53QV2 105 aaPredicted RBP6.37□□□□□ -1.39
NR1I3-222ENST00000506018 HIST1H4GQ99525 98 aa6.37□□□□□ -1.39
NR1I3-222ENST00000506018 TNXBP22105 4242 aa6.37□□□□□ -1.39
NR1I3-222ENST00000506018 H0Y9J4 135 aa6.36□□□□□ -1.39
NR1I3-222ENST00000506018 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
NR1I3-222ENST00000506018 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
NR1I3-222ENST00000506018 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
NR1I3-222ENST00000506018 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
NR1I3-222ENST00000506018 PCP4L1A6NKN8 68 aa6.35□□□□□ -1.39
NR1I3-222ENST00000506018 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
NR1I3-222ENST00000506018 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
NR1I3-222ENST00000506018 DDTP30046 118 aa6.34□□□□□ -1.39
NR1I3-222ENST00000506018 RPL24P83731 157 aaKnown RBP6.34□□□□□ -1.39
NR1I3-222ENST00000506018 HSD52Q0P140 79 aa6.34□□□□□ -1.39
NR1I3-222ENST00000506018 TP73-AS1Q9UF72 201 aa6.34□□□□□ -1.39
NR1I3-222ENST00000506018 IGLV1-50A0A075B6I6 118 aa6.33□□□□□ -1.4
NR1I3-222ENST00000506018 M0R143 59 aa6.33□□□□□ -1.4
NR1I3-222ENST00000506018 C2orf91Q6ZV80 131 aa6.33□□□□□ -1.4
NR1I3-222ENST00000506018 XAGE1AQ9HD64 81 aa6.33□□□□□ -1.4
NR1I3-222ENST00000506018 C22orf24Q9Y442 160 aa6.33□□□□□ -1.4
NR1I3-222ENST00000506018 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
NR1I3-222ENST00000506018 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
NR1I3-222ENST00000506018 KRTAP7-1Q8IUC3 87 aa6.32□□□□□ -1.4
NR1I3-222ENST00000506018 LITAFQ99732 161 aa6.32□□□□□ -1.4
NR1I3-222ENST00000506018 LOC107984156A0A0G2JMH3 177 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 265 ms