RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 SRRM2Q9UQ35 2752 aaKnown RBP5.29□□□□□ -1.56
KDM3B-202ENST00000504095 A0A1W2PNN7 141 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 KRTDAPP60985 99 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 Q5VSD8 79 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 LINC01545Q5VT33 79 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 PET117Q6UWS5 81 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
KDM3B-202ENST00000504095 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
KDM3B-202ENST00000504095 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
KDM3B-202ENST00000504095 EPM2AB3EWF7 344 aa5.28□□□□□ -1.56
KDM3B-202ENST00000504095 S100A6P06703 90 aa5.28□□□□□ -1.56
KDM3B-202ENST00000504095 TSPEAR-AS2P59090 65 aa5.28□□□□□ -1.56
KDM3B-202ENST00000504095 C9orf129Q5T035 196 aaKnown RBP5.28□□□□□ -1.56
KDM3B-202ENST00000504095 ZNF625Q96I27 306 aaPredicted RBP5.28□□□□□ -1.56
KDM3B-202ENST00000504095 LEPROTO15243 131 aa5.27□□□□□ -1.57
KDM3B-202ENST00000504095 S100A2P29034 98 aa5.27□□□□□ -1.57
KDM3B-202ENST00000504095 SNRPEP62304 92 aaKnown RBP5.27□□□□□ -1.57
KDM3B-202ENST00000504095 HIST1H2BLQ99880 126 aa5.27□□□□□ -1.57
KDM3B-202ENST00000504095 PCLOQ9Y6V0 5065 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 FLG2Q5D862 2391 aaPredicted RBP5.26□□□□□ -1.57
KDM3B-202ENST00000504095 C5orf52A6NGY3 159 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 PFN2P35080 140 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
KDM3B-202ENST00000504095 HERVK_113P61574 105 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 SFTA2Q6UW10 78 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 KRTAP7-1Q8IUC3 87 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 PLEKHB2Q96CS7 222 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 XAGE1AQ9HD64 81 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 ERG28Q9UKR5 140 aa5.26□□□□□ -1.57
KDM3B-202ENST00000504095 E9PLD3 99 aa5.25□□□□□ -1.57
KDM3B-202ENST00000504095 J3QQQ9 107 aa5.25□□□□□ -1.57
KDM3B-202ENST00000504095 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
KDM3B-202ENST00000504095 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
KDM3B-202ENST00000504095 C20orf202A1L168 122 aa5.24□□□□□ -1.57
KDM3B-202ENST00000504095 RPL37AP61513 92 aaKnown RBP5.24□□□□□ -1.57
KDM3B-202ENST00000504095 COX17Q14061 63 aa5.24□□□□□ -1.57
KDM3B-202ENST00000504095 SERTAD4-AS1Q5TG53 156 aa5.24□□□□□ -1.57
KDM3B-202ENST00000504095 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
KDM3B-202ENST00000504095 C7orf33Q8WU49 177 aa5.24□□□□□ -1.57
KDM3B-202ENST00000504095 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
KDM3B-202ENST00000504095 MYMXA0A1B0GTQ4 84 aa5.23□□□□□ -1.57
KDM3B-202ENST00000504095 LGALS3P17931 250 aaKnown RBP5.23□□□□□ -1.57
KDM3B-202ENST00000504095 LINC00158P58513 81 aa5.23□□□□□ -1.57
KDM3B-202ENST00000504095 HERV-K104P63124 156 aa5.23□□□□□ -1.57
KDM3B-202ENST00000504095 ATOH7Q8N100 152 aa5.23□□□□□ -1.57
KDM3B-202ENST00000504095 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 M0QXV9 152 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 SMIM13P0DJ93 91 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 NMUP48645 174 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 MEIG1Q5JSS6 88 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 LCE1AQ5T7P2 110 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
KDM3B-202ENST00000504095 PRR3P79522 188 aaKnown RBP5.21□□□□□ -1.58
KDM3B-202ENST00000504095 TTTY13Q9BZ97 58 aa5.21□□□□□ -1.58
KDM3B-202ENST00000504095 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
KDM3B-202ENST00000504095 INAFM2P0DMQ5 153 aa5.2□□□□□ -1.58
KDM3B-202ENST00000504095 HNRNPA3P51991 378 aaKnown RBP5.2□□□□□ -1.58
KDM3B-202ENST00000504095 MIR7-3HGQ8N6C7 128 aa5.2□□□□□ -1.58
KDM3B-202ENST00000504095 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
KDM3B-202ENST00000504095 Q8NDZ9 215 aa5.2□□□□□ -1.58
KDM3B-202ENST00000504095 IGLV5-37A0A075B6J1 123 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 A0A0J9YXY3 114 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 LINC00587B1AMM8 73 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 VPREB1P12018 145 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 AKR1D1P51857 326 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 DAND5Q8N907 189 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 TP73-AS1Q9UF72 201 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 PSORS1C2Q9UIG4 136 aa5.19□□□□□ -1.58
KDM3B-202ENST00000504095 ZNF815PA8K554 130 aa5.18□□□□□ -1.58
KDM3B-202ENST00000504095 UBE2BP63146 152 aa5.18□□□□□ -1.58
KDM3B-202ENST00000504095 MRPL55Q7Z7F7 128 aaKnown RBP5.18□□□□□ -1.58
KDM3B-202ENST00000504095 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
KDM3B-202ENST00000504095 GAGE10A6NGK3 116 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 SCGB1D1O95968 90 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 LBHQ53QV2 105 aaPredicted RBP5.17□□□□□ -1.58
KDM3B-202ENST00000504095 C1orf137Q5JT78 98 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 ADAMTSL4-AS1Q5T5F5 129 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 PCP2Q8IVA1 136 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 LINC00167Q96N53 147 aa5.17□□□□□ -1.58
KDM3B-202ENST00000504095 LOC107984156A0A0G2JMH3 177 aa5.16□□□□□ -1.58
KDM3B-202ENST00000504095 RPL24P83731 157 aaKnown RBP5.16□□□□□ -1.58
KDM3B-202ENST00000504095 ARL17AQ8IVW1 177 aa5.16□□□□□ -1.58
KDM3B-202ENST00000504095 BOD1L2Q8IYS8 172 aa5.16□□□□□ -1.58
KDM3B-202ENST00000504095 LITAFQ99732 161 aa5.16□□□□□ -1.58
KDM3B-202ENST00000504095 RPL37AP8A6NKH3 93 aa5.15□□□□□ -1.59
KDM3B-202ENST00000504095 HSBP1L1C9JCN9 74 aa5.15□□□□□ -1.59
KDM3B-202ENST00000504095 TIMM17BO60830 172 aa5.15□□□□□ -1.59
KDM3B-202ENST00000504095 NPC2P61916 151 aa5.15□□□□□ -1.59
KDM3B-202ENST00000504095 SOSTDC1Q6X4U4 206 aa5.15□□□□□ -1.59
KDM3B-202ENST00000504095 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.59
KDM3B-202ENST00000504095 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
KDM3B-202ENST00000504095 NCR3O14931 201 aa5.14□□□□□ -1.59
KDM3B-202ENST00000504095 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
KDM3B-202ENST00000504095 IGLV7-43P04211 117 aa5.14□□□□□ -1.59
KDM3B-202ENST00000504095 SRSF9Q13242 221 aaKnown RBP eCLIP5.14□□□□□ -1.59
KDM3B-202ENST00000504095 IGLV1-50A0A075B6I6 118 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms