RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 SYS1-DBNDD2H3BUS1 97 aa5.48□□□□□ -1.53
PROM1-204ENST00000503884 PLNP26678 52 aa5.48□□□□□ -1.53
PROM1-204ENST00000503884 RPL18AQ02543 176 aaKnown RBP5.48□□□□□ -1.53
PROM1-204ENST00000503884 C9orf116Q5BN46 136 aaPredicted RBP5.48□□□□□ -1.53
PROM1-204ENST00000503884 DPM2O94777 84 aa5.47□□□□□ -1.53
PROM1-204ENST00000503884 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
PROM1-204ENST00000503884 IGKCP01834 107 aa5.46□□□□□ -1.54
PROM1-204ENST00000503884 C3orf79P0CE67 100 aa5.46□□□□□ -1.54
PROM1-204ENST00000503884 LINC01545Q5VT33 79 aa5.46□□□□□ -1.54
PROM1-204ENST00000503884 SFTA2Q6UW10 78 aa5.46□□□□□ -1.54
PROM1-204ENST00000503884 PHF5AQ7RTV0 110 aaKnown RBP5.46□□□□□ -1.54
PROM1-204ENST00000503884 KRTAP11-1Q8IUC1 163 aa5.46□□□□□ -1.54
PROM1-204ENST00000503884 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
PROM1-204ENST00000503884 PMCHL2Q9BQD1 86 aa5.46□□□□□ -1.54
PROM1-204ENST00000503884 GAGE2EQ4V326 116 aa5.45□□□□□ -1.54
PROM1-204ENST00000503884 C1orf137Q5JT78 98 aa5.45□□□□□ -1.54
PROM1-204ENST00000503884 HIST3H2BBQ8N257 126 aa5.45□□□□□ -1.54
PROM1-204ENST00000503884 GAGE2DQ9UEU5 116 aa5.45□□□□□ -1.54
PROM1-204ENST00000503884 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
PROM1-204ENST00000503884 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
PROM1-204ENST00000503884 C9orf129Q5T035 196 aaKnown RBP5.44□□□□□ -1.54
PROM1-204ENST00000503884 LEPROTO15243 131 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 S100A6P06703 90 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 KRTAP1-4P0C5Y4 121 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 KRTDAPP60985 99 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 HERVK_113P61574 105 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 COX17Q14061 63 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 KRTAP7-1Q8IUC3 87 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 PRR26Q8N8Z3 221 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 DIRC1Q969H9 104 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 PLEKHB2Q96CS7 222 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 HIST1H2BLQ99880 126 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 ERG28Q9UKR5 140 aa5.43□□□□□ -1.54
PROM1-204ENST00000503884 FAM168BA1KXE4 195 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 C5orf52A6NGY3 159 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 E9PLD3 99 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 H0Y9J4 135 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 S100A2P29034 98 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 TSPEAR-AS2P59090 65 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 HERV-K104P63124 156 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 FAT4Q6V0I7 4981 aa5.42□□□□□ -1.54
PROM1-204ENST00000503884 J3QQQ9 107 aa5.41□□□□□ -1.54
PROM1-204ENST00000503884 SNRPEP62304 92 aaKnown RBP5.41□□□□□ -1.54
PROM1-204ENST00000503884 XAGE1AQ9HD64 81 aa5.41□□□□□ -1.54
PROM1-204ENST00000503884 NDUFA12Q9UI09 145 aa5.41□□□□□ -1.54
PROM1-204ENST00000503884 IGLV1-50A0A075B6I6 118 aa5.4□□□□□ -1.54
PROM1-204ENST00000503884 MYMXA0A1B0GTQ4 84 aa5.4□□□□□ -1.54
PROM1-204ENST00000503884 C20orf202A1L168 122 aa5.4□□□□□ -1.54
PROM1-204ENST00000503884 PFN2P35080 140 aa5.4□□□□□ -1.54
PROM1-204ENST00000503884 NMUP48645 174 aa5.4□□□□□ -1.54
PROM1-204ENST00000503884 AKR1D1P51857 326 aa5.4□□□□□ -1.54
PROM1-204ENST00000503884 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
PROM1-204ENST00000503884 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
PROM1-204ENST00000503884 M0QXV9 152 aa5.39□□□□□ -1.55
PROM1-204ENST00000503884 LGALS3P17931 250 aaKnown RBP5.39□□□□□ -1.55
PROM1-204ENST00000503884 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
PROM1-204ENST00000503884 IGLV5-37A0A075B6J1 123 aa5.38□□□□□ -1.55
PROM1-204ENST00000503884 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
PROM1-204ENST00000503884 LINC00158P58513 81 aa5.38□□□□□ -1.55
PROM1-204ENST00000503884 TP73-AS1Q9UF72 201 aa5.38□□□□□ -1.55
PROM1-204ENST00000503884 C22orf24Q9Y442 160 aa5.38□□□□□ -1.55
PROM1-204ENST00000503884 IGKV2D-26A0A0A0MRZ7 120 aa5.37□□□□□ -1.55
PROM1-204ENST00000503884 MEIG1Q5JSS6 88 aa5.37□□□□□ -1.55
PROM1-204ENST00000503884 A0A0J9YXY3 114 aa5.36□□□□□ -1.55
PROM1-204ENST00000503884 VPREB1P12018 145 aa5.36□□□□□ -1.55
PROM1-204ENST00000503884 ATOH7Q8N100 152 aa5.36□□□□□ -1.55
PROM1-204ENST00000503884 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
PROM1-204ENST00000503884 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
PROM1-204ENST00000503884 LOC107984156A0A0G2JMH3 177 aa5.35□□□□□ -1.55
PROM1-204ENST00000503884 A0A0U1RRA0 63 aa5.35□□□□□ -1.55
PROM1-204ENST00000503884 LBHQ53QV2 105 aaPredicted RBP5.35□□□□□ -1.55
PROM1-204ENST00000503884 MRPL55Q7Z7F7 128 aaKnown RBP5.35□□□□□ -1.55
PROM1-204ENST00000503884 ARL17AQ8IVW1 177 aa5.35□□□□□ -1.55
PROM1-204ENST00000503884 Q8NDZ9 215 aa5.35□□□□□ -1.55
PROM1-204ENST00000503884 RPL13AP40429 203 aaKnown RBP5.34□□□□□ -1.55
PROM1-204ENST00000503884 UBE2BP63146 152 aa5.34□□□□□ -1.55
PROM1-204ENST00000503884 RPL24P83731 157 aaKnown RBP5.34□□□□□ -1.55
PROM1-204ENST00000503884 LINC00167Q96N53 147 aa5.34□□□□□ -1.55
PROM1-204ENST00000503884 TTTY13Q9BZ97 58 aa5.34□□□□□ -1.55
PROM1-204ENST00000503884 ZNF815PA8K554 130 aa5.33□□□□□ -1.56
PROM1-204ENST00000503884 ZNF861PO60384 105 aa5.33□□□□□ -1.56
PROM1-204ENST00000503884 TIMM17BO60830 172 aa5.33□□□□□ -1.56
PROM1-204ENST00000503884 NKAPP1Q8N9T2 125 aa5.33□□□□□ -1.56
PROM1-204ENST00000503884 LITAFQ99732 161 aa5.33□□□□□ -1.56
PROM1-204ENST00000503884 PRR4Q16378 134 aa5.32□□□□□ -1.56
PROM1-204ENST00000503884 ADAMTSL4-AS1Q5T5F5 129 aa5.32□□□□□ -1.56
PROM1-204ENST00000503884 DAND5Q8N907 189 aa5.32□□□□□ -1.56
PROM1-204ENST00000503884 SCGB1D1O95968 90 aa5.31□□□□□ -1.56
PROM1-204ENST00000503884 PCP2Q8IVA1 136 aa5.31□□□□□ -1.56
PROM1-204ENST00000503884 BOD1L2Q8IYS8 172 aa5.31□□□□□ -1.56
PROM1-204ENST00000503884 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
PROM1-204ENST00000503884 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
PROM1-204ENST00000503884 HSBP1L1C9JCN9 74 aa5.3□□□□□ -1.56
PROM1-204ENST00000503884 M0R378 163 aa5.3□□□□□ -1.56
PROM1-204ENST00000503884 NDUFC2O95298 119 aa5.3□□□□□ -1.56
PROM1-204ENST00000503884 JOSD1Q15040 202 aaPredicted RBP5.3□□□□□ -1.56
PROM1-204ENST00000503884 SOSTDC1Q6X4U4 206 aa5.3□□□□□ -1.56
PROM1-204ENST00000503884 TMA7Q9Y2S6 64 aaKnown RBP5.3□□□□□ -1.56
PROM1-204ENST00000503884 A0A087X002 238 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms