RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 C14orf144Q96I85 54 aa4.55□□□□□ -1.68
USP46-203ENST00000502443 MIEN1Q9BRT3 115 aa4.55□□□□□ -1.68
USP46-203ENST00000502443 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
USP46-203ENST00000502443 M0QXV9 152 aa4.54□□□□□ -1.68
USP46-203ENST00000502443 PLNP26678 52 aa4.54□□□□□ -1.68
USP46-203ENST00000502443 DDTP30046 118 aa4.54□□□□□ -1.68
USP46-203ENST00000502443 SFTA2Q6UW10 78 aa4.54□□□□□ -1.68
USP46-203ENST00000502443 KRTAP7-1Q8IUC3 87 aa4.54□□□□□ -1.68
USP46-203ENST00000502443 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
USP46-203ENST00000502443 IGKV2D-26A0A0A0MRZ7 120 aa4.53□□□□□ -1.68
USP46-203ENST00000502443 COX17Q14061 63 aa4.53□□□□□ -1.68
USP46-203ENST00000502443 SERTAD4-AS1Q5TG53 156 aa4.53□□□□□ -1.68
USP46-203ENST00000502443 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
USP46-203ENST00000502443 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
USP46-203ENST00000502443 ERG28Q9UKR5 140 aa4.53□□□□□ -1.68
USP46-203ENST00000502443 COX8AP10176 69 aa4.52□□□□□ -1.69
USP46-203ENST00000502443 UBE2BP63146 152 aa4.52□□□□□ -1.69
USP46-203ENST00000502443 SLC25A34Q6PIV7 304 aa4.52□□□□□ -1.69
USP46-203ENST00000502443 PCP2Q8IVA1 136 aa4.52□□□□□ -1.69
USP46-203ENST00000502443 TP73-AS1Q9UF72 201 aa4.52□□□□□ -1.69
USP46-203ENST00000502443 C22orf24Q9Y442 160 aa4.52□□□□□ -1.69
USP46-203ENST00000502443 DLEU1O43261 78 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 LINC00158P58513 81 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 HERVK_113P61574 105 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 C1orf137Q5JT78 98 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 PLEKHB2Q96CS7 222 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
USP46-203ENST00000502443 A0A0U1RRA0 63 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 MYMXA0A1B0GTQ4 84 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
USP46-203ENST00000502443 E9PLD3 99 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 J3QL48 77 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 J3QQQ9 107 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 LEPROTO15243 131 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 NMUP48645 174 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 TSPEAR-AS2P59090 65 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 HERV-K104P63124 156 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 CTAG1AP78358 180 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
USP46-203ENST00000502443 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 C2orf91Q6ZV80 131 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 MRPL55Q7Z7F7 128 aaKnown RBP4.5□□□□□ -1.69
USP46-203ENST00000502443 TTTY13Q9BZ97 58 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 PLA2G2DQ9UNK4 145 aa4.5□□□□□ -1.69
USP46-203ENST00000502443 GAGE10A6NGK3 116 aa4.49□□□□□ -1.69
USP46-203ENST00000502443 OXTP01178 125 aa4.49□□□□□ -1.69
USP46-203ENST00000502443 SMIM13P0DJ93 91 aa4.49□□□□□ -1.69
USP46-203ENST00000502443 LGALS3P17931 250 aaKnown RBP4.49□□□□□ -1.69
USP46-203ENST00000502443 SRSF9Q13242 221 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP46-203ENST00000502443 SPINK6Q6UWN8 80 aa4.49□□□□□ -1.69
USP46-203ENST00000502443 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
USP46-203ENST00000502443 RPL37AP8A6NKH3 93 aa4.48□□□□□ -1.69
USP46-203ENST00000502443 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
USP46-203ENST00000502443 SMCPP49901 116 aaPredicted RBP4.48□□□□□ -1.69
USP46-203ENST00000502443 RPL24P83731 157 aaKnown RBP4.48□□□□□ -1.69
USP46-203ENST00000502443 LINC00167Q96N53 147 aa4.48□□□□□ -1.69
USP46-203ENST00000502443 IGLV5-37A0A075B6J1 123 aa4.47□□□□□ -1.69
USP46-203ENST00000502443 MIR7-3HGQ8N6C7 128 aa4.47□□□□□ -1.69
USP46-203ENST00000502443 SNHG12Q9BXW3 62 aa4.47□□□□□ -1.69
USP46-203ENST00000502443 MYCBP2O75592 4640 aa4.47□□□□□ -1.69
USP46-203ENST00000502443 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
USP46-203ENST00000502443 VPREB1P12018 145 aa4.46□□□□□ -1.7
USP46-203ENST00000502443 REG3GQ6UW15 175 aa4.46□□□□□ -1.7
USP46-203ENST00000502443 HIGD1BQ9P298 99 aa4.46□□□□□ -1.7
USP46-203ENST00000502443 IGKV2-28A0A075B6P5 120 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 M0R143 59 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 IGKV2D-28P01615 120 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 C4orf48Q5BLP8 95 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 DAND5Q8N907 189 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 Q8NDZ9 215 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 DIRC1Q969H9 104 aa4.45□□□□□ -1.7
USP46-203ENST00000502443 IGLV1-50A0A075B6I6 118 aa4.44□□□□□ -1.7
USP46-203ENST00000502443 A0A0J9YXY3 114 aa4.44□□□□□ -1.7
USP46-203ENST00000502443 ZNF861PO60384 105 aa4.44□□□□□ -1.7
USP46-203ENST00000502443 BCE1O60756 84 aa4.44□□□□□ -1.7
USP46-203ENST00000502443 HINT1P49773 126 aaPredicted RBP4.44□□□□□ -1.7
USP46-203ENST00000502443 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
USP46-203ENST00000502443 LINC01600Q96MT4 127 aa4.44□□□□□ -1.7
USP46-203ENST00000502443 H0Y9J4 135 aa4.43□□□□□ -1.7
USP46-203ENST00000502443 M0R378 163 aa4.43□□□□□ -1.7
USP46-203ENST00000502443 NCR3O14931 201 aa4.43□□□□□ -1.7
USP46-203ENST00000502443 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
USP46-203ENST00000502443 RPL28P46779 137 aaKnown RBP4.43□□□□□ -1.7
USP46-203ENST00000502443 HSD52Q0P140 79 aa4.43□□□□□ -1.7
USP46-203ENST00000502443 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
USP46-203ENST00000502443 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
USP46-203ENST00000502443 LOC107984156A0A0G2JMH3 177 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 TMEM238C9JI98 176 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 UBE2AP49459 152 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 NPC2P61916 151 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 BATFQ16520 125 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 ADAMTSL4-AS1Q5T5F5 129 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 ARL17AQ8IVW1 177 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 TMEM126AQ9H061 195 aa4.42□□□□□ -1.7
USP46-203ENST00000502443 FXYD2P54710 66 aa4.41□□□□□ -1.7
USP46-203ENST00000502443 TAL2Q16559 108 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms