RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PFN2P35080 140 aa9.53□□□□□ -0.88
NUP50-219ENST00000497960 NMUP48645 174 aa9.53□□□□□ -0.88
NUP50-219ENST00000497960 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
NUP50-219ENST00000497960 HSBP1L1C9JCN9 74 aa9.51□□□□□ -0.89
NUP50-219ENST00000497960 PKHD1L1Q86WI1 4243 aa9.5□□□□□ -0.89
NUP50-219ENST00000497960 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
NUP50-219ENST00000497960 COX17Q14061 63 aa9.5□□□□□ -0.89
NUP50-219ENST00000497960 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
NUP50-219ENST00000497960 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
NUP50-219ENST00000497960 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
NUP50-219ENST00000497960 IGKV2D-26A0A0A0MRZ7 120 aa9.49□□□□□ -0.89
NUP50-219ENST00000497960 A0A0U1RRA0 63 aa9.49□□□□□ -0.89
NUP50-219ENST00000497960 LINC00158P58513 81 aa9.49□□□□□ -0.89
NUP50-219ENST00000497960 PHF5AQ7RTV0 110 aaKnown RBP9.49□□□□□ -0.89
NUP50-219ENST00000497960 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
NUP50-219ENST00000497960 LINC00587B1AMM8 73 aa9.48□□□□□ -0.89
NUP50-219ENST00000497960 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
NUP50-219ENST00000497960 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
NUP50-219ENST00000497960 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
NUP50-219ENST00000497960 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
NUP50-219ENST00000497960 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
NUP50-219ENST00000497960 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
NUP50-219ENST00000497960 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
NUP50-219ENST00000497960 SRSF9Q13242 221 aaKnown RBP eCLIP9.46□□□□□ -0.9
NUP50-219ENST00000497960 TTTY13Q9BZ97 58 aa9.46□□□□□ -0.9
NUP50-219ENST00000497960 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
NUP50-219ENST00000497960 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
NUP50-219ENST00000497960 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
NUP50-219ENST00000497960 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
NUP50-219ENST00000497960 M0QXV9 152 aa9.44□□□□□ -0.9
NUP50-219ENST00000497960 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
NUP50-219ENST00000497960 MIR7-3HGQ8N6C7 128 aa9.44□□□□□ -0.9
NUP50-219ENST00000497960 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
NUP50-219ENST00000497960 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
NUP50-219ENST00000497960 UBE2BP63146 152 aa9.42□□□□□ -0.9
NUP50-219ENST00000497960 DAND5Q8N907 189 aa9.42□□□□□ -0.9
NUP50-219ENST00000497960 VAMP8Q9BV40 100 aa9.42□□□□□ -0.9
NUP50-219ENST00000497960 PCP2Q8IVA1 136 aa9.41□□□□□ -0.9
NUP50-219ENST00000497960 PYY3Q5JQD4 70 aa9.4□□□□□ -0.9
NUP50-219ENST00000497960 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
NUP50-219ENST00000497960 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
NUP50-219ENST00000497960 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
NUP50-219ENST00000497960 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
NUP50-219ENST00000497960 TIMM17BO60830 172 aa9.39□□□□□ -0.91
NUP50-219ENST00000497960 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
NUP50-219ENST00000497960 SPATA45Q537H7 98 aa9.39□□□□□ -0.91
NUP50-219ENST00000497960 NPC2P61916 151 aa9.38□□□□□ -0.91
NUP50-219ENST00000497960 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
NUP50-219ENST00000497960 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
NUP50-219ENST00000497960 TMEM238C9JI98 176 aa9.37□□□□□ -0.91
NUP50-219ENST00000497960 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
NUP50-219ENST00000497960 BOD1L2Q8IYS8 172 aa9.37□□□□□ -0.91
NUP50-219ENST00000497960 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
NUP50-219ENST00000497960 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
NUP50-219ENST00000497960 IGLV5-37A0A075B6J1 123 aa9.36□□□□□ -0.91
NUP50-219ENST00000497960 VPREB1P12018 145 aa9.36□□□□□ -0.91
NUP50-219ENST00000497960 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
NUP50-219ENST00000497960 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
NUP50-219ENST00000497960 LITAFQ99732 161 aa9.36□□□□□ -0.91
NUP50-219ENST00000497960 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
NUP50-219ENST00000497960 GAGE10A6NGK3 116 aa9.34□□□□□ -0.91
NUP50-219ENST00000497960 COX8AP10176 69 aa9.34□□□□□ -0.91
NUP50-219ENST00000497960 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
NUP50-219ENST00000497960 Q8NDZ9 215 aa9.34□□□□□ -0.91
NUP50-219ENST00000497960 NCR3O14931 201 aa9.33□□□□□ -0.92
NUP50-219ENST00000497960 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
NUP50-219ENST00000497960 SPANXCQ9NY87 97 aa9.33□□□□□ -0.92
NUP50-219ENST00000497960 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
NUP50-219ENST00000497960 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
NUP50-219ENST00000497960 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
NUP50-219ENST00000497960 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 H0Y9J4 135 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 S100A12P80511 92 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 COPS9Q8WXC6 57 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 C14orf144Q96I85 54 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 LINC00167Q96N53 147 aa9.31□□□□□ -0.92
NUP50-219ENST00000497960 SLC25A34Q6PIV7 304 aa9.3□□□□□ -0.92
NUP50-219ENST00000497960 IGKV2-28A0A075B6P5 120 aa9.29□□□□□ -0.92
NUP50-219ENST00000497960 RPL37AP8A6NKH3 93 aa9.29□□□□□ -0.92
NUP50-219ENST00000497960 M0R378 163 aa9.29□□□□□ -0.92
NUP50-219ENST00000497960 IGKV2D-28P01615 120 aa9.29□□□□□ -0.92
NUP50-219ENST00000497960 Q6ZVH6 145 aa9.29□□□□□ -0.92
NUP50-219ENST00000497960 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
NUP50-219ENST00000497960 DLEU1O43261 78 aa9.28□□□□□ -0.92
NUP50-219ENST00000497960 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
NUP50-219ENST00000497960 NDUFC2O95298 119 aa9.28□□□□□ -0.92
NUP50-219ENST00000497960 IFITM1P13164 125 aa9.28□□□□□ -0.92
NUP50-219ENST00000497960 TNXBP22105 4242 aa9.28□□□□□ -0.92
NUP50-219ENST00000497960 SMIM6P0DI80 62 aa9.27□□□□□ -0.93
NUP50-219ENST00000497960 ZNF861PO60384 105 aa9.26□□□□□ -0.93
NUP50-219ENST00000497960 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
NUP50-219ENST00000497960 LOC105371267A0A1B0GV96 52 aa9.25□□□□□ -0.93
NUP50-219ENST00000497960 MUSTN1Q8IVN3 82 aa9.25□□□□□ -0.93
NUP50-219ENST00000497960 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
NUP50-219ENST00000497960 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
NUP50-219ENST00000497960 BCE1O60756 84 aa9.24□□□□□ -0.93
NUP50-219ENST00000497960 S100A7L2Q5SY68 101 aa9.24□□□□□ -0.93
NUP50-219ENST00000497960 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
NUP50-219ENST00000497960 TRBV10-3A0A0K0K1G6 114 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms