RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 LRP2P98164 4655 aa3.91□□□□□ -1.78
HMGCL-206ENST00000496907 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.78
HMGCL-206ENST00000496907 E9PLD3 99 aa3.9□□□□□ -1.79
HMGCL-206ENST00000496907 SMR3BP02814 79 aaPredicted RBP3.9□□□□□ -1.79
HMGCL-206ENST00000496907 LGALS3P17931 250 aaKnown RBP3.9□□□□□ -1.79
HMGCL-206ENST00000496907 PTTG1IPP53801 180 aa3.9□□□□□ -1.79
HMGCL-206ENST00000496907 HIST1H2BLQ99880 126 aa3.9□□□□□ -1.79
HMGCL-206ENST00000496907 J3QQQ9 107 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 FUSP35637 526 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGCL-206ENST00000496907 XGP55808 180 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 RPL18AQ02543 176 aaKnown RBP3.89□□□□□ -1.79
HMGCL-206ENST00000496907 MAJINQ3KP22 176 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 C2orf82Q6UX34 121 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 COPS9Q8WXC6 57 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 LINC00526Q96FQ7 95 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 C6orf48Q9UBA6 75 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 NDUFA12Q9UI09 145 aa3.89□□□□□ -1.79
HMGCL-206ENST00000496907 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
HMGCL-206ENST00000496907 GAGE2BQ13066 116 aa3.88□□□□□ -1.79
HMGCL-206ENST00000496907 LBHQ53QV2 105 aaPredicted RBP3.88□□□□□ -1.79
HMGCL-206ENST00000496907 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
HMGCL-206ENST00000496907 STPG4Q8N801 248 aa3.88□□□□□ -1.79
HMGCL-206ENST00000496907 SPACA4Q8TDM5 124 aa3.88□□□□□ -1.79
HMGCL-206ENST00000496907 C7orf33Q8WU49 177 aa3.88□□□□□ -1.79
HMGCL-206ENST00000496907 ZNF625Q96I27 306 aaPredicted RBP3.88□□□□□ -1.79
HMGCL-206ENST00000496907 PLAC8Q9NZF1 115 aa3.88□□□□□ -1.79
HMGCL-206ENST00000496907 ERG28Q9UKR5 140 aa3.88□□□□□ -1.79
HMGCL-206ENST00000496907 A0A087WYN8 130 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 A0A096LNI7 61 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 IGKV2-24A0A0C4DH68 120 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 SCGB1D1O95968 90 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 LINC00158P58513 81 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 HAMPP81172 84 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 MEIG1Q5JSS6 88 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 C10orf25Q5T742 122 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 PMCHL2Q9BQD1 86 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
HMGCL-206ENST00000496907 TIMM17BO60830 172 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 LINC01620Q4KN68 170 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 GAGE2EQ4V326 116 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 Q6ZRP5 223 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 Q6ZVH6 145 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 SCXQ7RTU7 201 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 FAM30AQ9NZY2 134 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 GAGE2DQ9UEU5 116 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 CBY1Q9Y3M2 126 aa3.86□□□□□ -1.79
HMGCL-206ENST00000496907 A0A0J9YXY3 114 aa3.85□□□□□ -1.79
HMGCL-206ENST00000496907 PFN2P35080 140 aa3.85□□□□□ -1.79
HMGCL-206ENST00000496907 S100A12P80511 92 aa3.85□□□□□ -1.79
HMGCL-206ENST00000496907 JOSD1Q15040 202 aaPredicted RBP3.85□□□□□ -1.79
HMGCL-206ENST00000496907 C9orf116Q5BN46 136 aaPredicted RBP3.85□□□□□ -1.79
HMGCL-206ENST00000496907 MIEN1Q9BRT3 115 aa3.85□□□□□ -1.79
HMGCL-206ENST00000496907 IGKV2D-26A0A0A0MRZ7 120 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 LOC107984156A0A0G2JMH3 177 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 SCGB1D4Q6XE38 83 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 ARL17AQ8IVW1 177 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 PPDPFQ9H3Y8 114 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 SND1-IT1Q9HBX3 110 aa3.84□□□□□ -1.79
HMGCL-206ENST00000496907 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.8
HMGCL-206ENST00000496907 IGLV5-37A0A075B6J1 123 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
HMGCL-206ENST00000496907 TMEM238C9JI98 176 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 NDUFC2O95298 119 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 CHTF8P0CG12 524 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 SMIM13P0DJ93 91 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 IFITM1P13164 125 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 BOD1L2Q8IYS8 172 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 LINC00518Q8N0U6 118 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 XAGE1AQ9HD64 81 aa3.83□□□□□ -1.8
HMGCL-206ENST00000496907 A0A1W2PNN7 141 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 M0QXV9 152 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 M0R378 163 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 DLEU1O43261 78 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 C9orf129Q5T035 196 aaKnown RBP3.82□□□□□ -1.8
HMGCL-206ENST00000496907 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
HMGCL-206ENST00000496907 MIR7-3HGQ8N6C7 128 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 VAMP8Q9BV40 100 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 CRCT1Q9UGL9 99 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
HMGCL-206ENST00000496907 TRBV10-2A0A0K0K1G8 114 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 LOC105371267A0A1B0GV96 52 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 PANO1I0J062 215 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 TSPEAR-AS2P59090 65 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 RPL37AP61513 92 aaKnown RBP3.81□□□□□ -1.8
HMGCL-206ENST00000496907 UBE2BP63146 152 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
HMGCL-206ENST00000496907 ATOH7Q8N100 152 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 SPANXDQ9BXN6 97 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 SPANXCQ9NY87 97 aa3.81□□□□□ -1.8
HMGCL-206ENST00000496907 A0A0U1RRA0 63 aa3.8□□□□□ -1.8
HMGCL-206ENST00000496907 COX8AP10176 69 aa3.8□□□□□ -1.8
HMGCL-206ENST00000496907 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGCL-206ENST00000496907 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
HMGCL-206ENST00000496907 VPREB1P12018 145 aa3.79□□□□□ -1.8
HMGCL-206ENST00000496907 HINT1P49773 126 aaPredicted RBP3.79□□□□□ -1.8
HMGCL-206ENST00000496907 SPATA45Q537H7 98 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms