RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
USP4-214ENST00000491791 UBE2WQ96B02 151 aa7.19□□□□□ -1.26
USP4-214ENST00000491791 C2orf48Q96LS8 159 aa7.19□□□□□ -1.26
USP4-214ENST00000491791 PCP4P48539 62 aa7.18□□□□□ -1.26
USP4-214ENST00000491791 FAM218AQ96MZ4 157 aa7.18□□□□□ -1.26
USP4-214ENST00000491791 LINC00167Q96N53 147 aa7.18□□□□□ -1.26
USP4-214ENST00000491791 TMEM126AQ9H061 195 aa7.18□□□□□ -1.26
USP4-214ENST00000491791 TEX49A0A1B0GTD5 131 aa7.17□□□□□ -1.26
USP4-214ENST00000491791 C10orf25Q5T742 122 aa7.17□□□□□ -1.26
USP4-214ENST00000491791 UNQ6190/PRO20217Q6UXQ8 127 aa7.17□□□□□ -1.26
USP4-214ENST00000491791 C22orf24Q9Y442 160 aa7.17□□□□□ -1.26
USP4-214ENST00000491791 TENM2Q9NT68 2774 aa7.16□□□□□ -1.26
USP4-214ENST00000491791 BAALC-AS2P0C853 105 aa7.15□□□□□ -1.26
USP4-214ENST00000491791 C6orf223Q8N319 242 aa7.15□□□□□ -1.26
USP4-214ENST00000491791 UPK3BQ9BT76 320 aa7.15□□□□□ -1.26
USP4-214ENST00000491791 LCE6AA0A183 80 aa7.14□□□□□ -1.27
USP4-214ENST00000491791 ACYP1P07311 99 aa7.14□□□□□ -1.27
USP4-214ENST00000491791 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
USP4-214ENST00000491791 C15orf56Q8N910 161 aa7.14□□□□□ -1.27
USP4-214ENST00000491791 OBSCN-AS1Q96MR7 158 aa7.14□□□□□ -1.27
USP4-214ENST00000491791 C6orf48Q9UBA6 75 aa7.14□□□□□ -1.27
USP4-214ENST00000491791 IGLV6-57P01721 117 aa7.13□□□□□ -1.27
USP4-214ENST00000491791 OR13C6PQ8NH95 151 aa7.13□□□□□ -1.27
USP4-214ENST00000491791 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
USP4-214ENST00000491791 ZNF561-AS1K7EIQ3 104 aa7.12□□□□□ -1.27
USP4-214ENST00000491791 INAFM2P0DMQ5 153 aa7.12□□□□□ -1.27
USP4-214ENST00000491791 Q8NDZ9 215 aa7.12□□□□□ -1.27
USP4-214ENST00000491791 A0A087WYN8 130 aa7.11□□□□□ -1.27
USP4-214ENST00000491791 SDIM1Q6ZPB5 146 aa7.11□□□□□ -1.27
USP4-214ENST00000491791 DNAH7Q8WXX0 4024 aa7.11□□□□□ -1.27
USP4-214ENST00000491791 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
USP4-214ENST00000491791 DNAL4O96015 105 aa7.1□□□□□ -1.27
USP4-214ENST00000491791 TLX1NBP0CAT3 122 aa7.1□□□□□ -1.27
USP4-214ENST00000491791 PRR3P79522 188 aaKnown RBP7.1□□□□□ -1.27
USP4-214ENST00000491791 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
USP4-214ENST00000491791 LINC00588Q9Y4M8 146 aa7.1□□□□□ -1.27
USP4-214ENST00000491791 NDUFC2-KCTD14E9PQ53 114 aa7.09□□□□□ -1.27
USP4-214ENST00000491791 XGP55808 180 aa7.09□□□□□ -1.27
USP4-214ENST00000491791 Q8N814 137 aa7.09□□□□□ -1.27
USP4-214ENST00000491791 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
USP4-214ENST00000491791 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.27
USP4-214ENST00000491791 HUWE1Q7Z6Z7 4374 aaKnown RBP7.08□□□□□ -1.28
USP4-214ENST00000491791 H3BQ85 93 aa7.08□□□□□ -1.28
USP4-214ENST00000491791 LECT2O14960 151 aa7.08□□□□□ -1.28
USP4-214ENST00000491791 SNCGO76070 127 aa7.08□□□□□ -1.28
USP4-214ENST00000491791 Q6Q795 121 aa7.08□□□□□ -1.28
USP4-214ENST00000491791 Q6ZRU5 148 aa7.08□□□□□ -1.28
USP4-214ENST00000491791 RMI2Q96E14 147 aa7.08□□□□□ -1.28
USP4-214ENST00000491791 VPREB1P12018 145 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 S100A7L2Q5SY68 101 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 LINC00575Q6W349 94 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 Q9HAA7 133 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 PLA2G2DQ9UNK4 145 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 RYR2Q92736 4967 aa7.07□□□□□ -1.28
USP4-214ENST00000491791 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
USP4-214ENST00000491791 MT-ATP8P03928 68 aa7.06□□□□□ -1.28
USP4-214ENST00000491791 SYCNQ0VAF6 134 aa7.06□□□□□ -1.28
USP4-214ENST00000491791 LYSTQ99698 3801 aa7.06□□□□□ -1.28
USP4-214ENST00000491791 TMEM256-PLSCR3K7ERE1 68 aa7.05□□□□□ -1.28
USP4-214ENST00000491791 M0R378 163 aa7.05□□□□□ -1.28
USP4-214ENST00000491791 NCR3O14931 201 aa7.05□□□□□ -1.28
USP4-214ENST00000491791 HIGD2BQ4VC39 106 aa7.05□□□□□ -1.28
USP4-214ENST00000491791 C6orf99Q4VX62 202 aa7.05□□□□□ -1.28
USP4-214ENST00000491791 SACSQ9NZJ4 4579 aa7.05□□□□□ -1.28
USP4-214ENST00000491791 CSMD3Q7Z407 3707 aa7.04□□□□□ -1.28
USP4-214ENST00000491791 IGLV5-37A0A075B6J1 123 aa7.03□□□□□ -1.28
USP4-214ENST00000491791 TRBV10-3A0A0K0K1G6 114 aa7.03□□□□□ -1.28
USP4-214ENST00000491791 JMJD7-PLA2G4BH0Y9G9 81 aa7.03□□□□□ -1.28
USP4-214ENST00000491791 RPL18AQ02543 176 aaKnown RBP7.03□□□□□ -1.28
USP4-214ENST00000491791 TRAV23DV6A0A075B6W5 121 aa7.02□□□□□ -1.29
USP4-214ENST00000491791 IMUPQ9GZP8 106 aa7.02□□□□□ -1.29
USP4-214ENST00000491791 XAGE1AQ9HD64 81 aa7.02□□□□□ -1.29
USP4-214ENST00000491791 BIRC6Q9NR09 4857 aa7.02□□□□□ -1.29
USP4-214ENST00000491791 EPPK1P58107 5090 aaKnown RBP7.02□□□□□ -1.29
USP4-214ENST00000491791 DNAH1Q9P2D7 4330 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 TRBV7-7A0A0K0K1E9 115 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 hADV29S1A0JD25 119 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 GHRHP01286 108 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 ELOF1P60002 83 aaKnown RBP7.01□□□□□ -1.29
USP4-214ENST00000491791 Q6ZRP5 223 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 LINC00643Q86TS7 51 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
USP4-214ENST00000491791 ZNF73O43830 326 aaPredicted RBP7□□□□□ -1.29
USP4-214ENST00000491791 SLPIP03973 132 aa7□□□□□ -1.29
USP4-214ENST00000491791 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
USP4-214ENST00000491791 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7□□□□□ -1.29
USP4-214ENST00000491791 APLNQ9ULZ1 77 aa7□□□□□ -1.29
USP4-214ENST00000491791 USP17L23D6RBM5 183 aa6.99□□□□□ -1.29
USP4-214ENST00000491791 KCNQ1DNQ9H478 68 aa6.99□□□□□ -1.29
USP4-214ENST00000491791 CCKP06307 115 aa6.98□□□□□ -1.29
USP4-214ENST00000491791 GAGE2BQ13066 116 aa6.98□□□□□ -1.29
USP4-214ENST00000491791 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
USP4-214ENST00000491791 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
USP4-214ENST00000491791 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
USP4-214ENST00000491791 COX7BP24311 80 aa6.97□□□□□ -1.29
USP4-214ENST00000491791 LOC110117498A0A087WWA1 95 aa6.96□□□□□ -1.3
USP4-214ENST00000491791 PDE6GP18545 87 aa6.96□□□□□ -1.3
USP4-214ENST00000491791 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms