RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 COX17Q14061 63 aa8.72□□□□□ -1.01
CDK9-204ENST00000491521 UQCR10Q9UDW1 63 aa8.72□□□□□ -1.01
CDK9-204ENST00000491521 NDUFC2-KCTD14E9PQ53 114 aa8.71□□□□□ -1.02
CDK9-204ENST00000491521 GAGE2BQ13066 116 aa8.71□□□□□ -1.02
CDK9-204ENST00000491521 GAGE2EQ4V326 116 aa8.71□□□□□ -1.02
CDK9-204ENST00000491521 GAGE2DQ9UEU5 116 aa8.71□□□□□ -1.02
CDK9-204ENST00000491521 PKIGQ9Y2B9 76 aa8.71□□□□□ -1.02
CDK9-204ENST00000491521 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.71□□□□□ -1.02
CDK9-204ENST00000491521 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.02
CDK9-204ENST00000491521 PANO1I0J062 215 aa8.7□□□□□ -1.02
CDK9-204ENST00000491521 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
CDK9-204ENST00000491521 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 TMEM238C9JI98 176 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 TSTD3H0UI37 97 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 TIMM17BO60830 172 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDK9-204ENST00000491521 ADAMTSL4-AS1Q5T5F5 129 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 MIR7-3HGQ8N6C7 128 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 DAND5Q8N907 189 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 MIEN1Q9BRT3 115 aa8.69□□□□□ -1.02
CDK9-204ENST00000491521 IGKV2-24A0A0C4DH68 120 aa8.68□□□□□ -1.02
CDK9-204ENST00000491521 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
CDK9-204ENST00000491521 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
CDK9-204ENST00000491521 NPC2P61916 151 aa8.68□□□□□ -1.02
CDK9-204ENST00000491521 SDIM1Q6ZPB5 146 aa8.68□□□□□ -1.02
CDK9-204ENST00000491521 Q6ZRP5 223 aa8.68□□□□□ -1.02
CDK9-204ENST00000491521 HIST1H4GQ99525 98 aa8.67□□□□□ -1.02
CDK9-204ENST00000491521 XAGE1AQ9HD64 81 aa8.67□□□□□ -1.02
CDK9-204ENST00000491521 A0A096LNI7 61 aa8.66□□□□□ -1.02
CDK9-204ENST00000491521 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
CDK9-204ENST00000491521 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
CDK9-204ENST00000491521 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
CDK9-204ENST00000491521 LITAFQ99732 161 aa8.66□□□□□ -1.02
CDK9-204ENST00000491521 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
CDK9-204ENST00000491521 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
CDK9-204ENST00000491521 PTTG1IPP53801 180 aa8.65□□□□□ -1.02
CDK9-204ENST00000491521 C2orf91Q6ZV80 131 aa8.65□□□□□ -1.02
CDK9-204ENST00000491521 SPANXDQ9BXN6 97 aa8.65□□□□□ -1.02
CDK9-204ENST00000491521 SPANXCQ9NY87 97 aa8.65□□□□□ -1.02
CDK9-204ENST00000491521 KRTAP29-1A8MX34 341 aaPredicted RBP8.64□□□□□ -1.03
CDK9-204ENST00000491521 Q6ZVH6 145 aa8.64□□□□□ -1.03
CDK9-204ENST00000491521 SPANXB1Q9NS25 103 aaPredicted RBP8.64□□□□□ -1.03
CDK9-204ENST00000491521 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
CDK9-204ENST00000491521 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
CDK9-204ENST00000491521 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
CDK9-204ENST00000491521 LINC00474Q9P2X8 69 aa8.63□□□□□ -1.03
CDK9-204ENST00000491521 IFITM1P13164 125 aa8.62□□□□□ -1.03
CDK9-204ENST00000491521 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
CDK9-204ENST00000491521 A0A087WYN8 130 aa8.6□□□□□ -1.03
CDK9-204ENST00000491521 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
CDK9-204ENST00000491521 TAL2Q16559 108 aa8.6□□□□□ -1.03
CDK9-204ENST00000491521 SOSTDC1Q6X4U4 206 aa8.6□□□□□ -1.03
CDK9-204ENST00000491521 SPACA4Q8TDM5 124 aa8.6□□□□□ -1.03
CDK9-204ENST00000491521 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
CDK9-204ENST00000491521 CTAG1AP78358 180 aa8.59□□□□□ -1.03
CDK9-204ENST00000491521 HSD52Q0P140 79 aa8.59□□□□□ -1.03
CDK9-204ENST00000491521 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
CDK9-204ENST00000491521 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
CDK9-204ENST00000491521 CEND1Q8N111 149 aa8.58□□□□□ -1.04
CDK9-204ENST00000491521 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 PCP4L1A6NKN8 68 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 DDTP30046 118 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
CDK9-204ENST00000491521 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
CDK9-204ENST00000491521 OXTP01178 125 aa8.56□□□□□ -1.04
CDK9-204ENST00000491521 PLA2G2DQ9UNK4 145 aa8.56□□□□□ -1.04
CDK9-204ENST00000491521 A4D1N5 150 aa8.55□□□□□ -1.04
CDK9-204ENST00000491521 NCR3O14931 201 aa8.55□□□□□ -1.04
CDK9-204ENST00000491521 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
CDK9-204ENST00000491521 NDUFC2O95298 119 aa8.54□□□□□ -1.04
CDK9-204ENST00000491521 VPREB1P12018 145 aa8.54□□□□□ -1.04
CDK9-204ENST00000491521 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
CDK9-204ENST00000491521 Q8NDZ9 215 aa8.54□□□□□ -1.04
CDK9-204ENST00000491521 C7orf33Q8WU49 177 aa8.54□□□□□ -1.04
CDK9-204ENST00000491521 PPDPFQ9H3Y8 114 aa8.54□□□□□ -1.04
CDK9-204ENST00000491521 C22orf24Q9Y442 160 aa8.54□□□□□ -1.04
CDK9-204ENST00000491521 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
CDK9-204ENST00000491521 A6NJY4 79 aa8.53□□□□□ -1.04
CDK9-204ENST00000491521 M0QXV9 152 aa8.53□□□□□ -1.04
CDK9-204ENST00000491521 M0R378 163 aa8.53□□□□□ -1.04
CDK9-204ENST00000491521 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
CDK9-204ENST00000491521 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
CDK9-204ENST00000491521 M0R143 59 aa8.52□□□□□ -1.05
CDK9-204ENST00000491521 FXYD2P54710 66 aa8.52□□□□□ -1.05
CDK9-204ENST00000491521 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
CDK9-204ENST00000491521 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
CDK9-204ENST00000491521 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
CDK9-204ENST00000491521 A6NDN8 102 aa8.51□□□□□ -1.05
CDK9-204ENST00000491521 S100A7L2Q5SY68 101 aa8.51□□□□□ -1.05
CDK9-204ENST00000491521 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
CDK9-204ENST00000491521 PHF5AQ7RTV0 110 aaKnown RBP8.51□□□□□ -1.05
CDK9-204ENST00000491521 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
CDK9-204ENST00000491521 BATFQ16520 125 aa8.5□□□□□ -1.05
CDK9-204ENST00000491521 MRPL55Q7Z7F7 128 aaKnown RBP8.5□□□□□ -1.05
CDK9-204ENST00000491521 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms