RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 C2orf48Q96LS8 159 aa10.66□□□□□ -0.7
RAPGEF3-211ENST00000488250 BAALC-AS2P0C853 105 aa10.65□□□□□ -0.7
RAPGEF3-211ENST00000488250 Q8NDZ9 215 aa10.65□□□□□ -0.7
RAPGEF3-211ENST00000488250 A0A087WYN8 130 aa10.64□□□□□ -0.71
RAPGEF3-211ENST00000488250 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
RAPGEF3-211ENST00000488250 CAMK2N2Q96S95 79 aa10.63□□□□□ -0.71
RAPGEF3-211ENST00000488250 HIGD2BQ4VC39 106 aa10.62□□□□□ -0.71
RAPGEF3-211ENST00000488250 C22orf24Q9Y442 160 aa10.62□□□□□ -0.71
RAPGEF3-211ENST00000488250 A0A1B0GX51 115 aa10.62□□□□□ -0.71
RAPGEF3-211ENST00000488250 DNAL4O96015 105 aa10.62□□□□□ -0.71
RAPGEF3-211ENST00000488250 HUWE1Q7Z6Z7 4374 aaKnown RBP10.61□□□□□ -0.71
RAPGEF3-211ENST00000488250 IGKV2D-24A0A075B6R9 120 aa10.61□□□□□ -0.71
RAPGEF3-211ENST00000488250 FAM240AA0A1B0GVK7 77 aa10.6□□□□□ -0.71
RAPGEF3-211ENST00000488250 UPK3BQ9BT76 320 aa10.6□□□□□ -0.71
RAPGEF3-211ENST00000488250 Q9HAA7 133 aa10.6□□□□□ -0.71
RAPGEF3-211ENST00000488250 NCR3O14931 201 aa10.6□□□□□ -0.71
RAPGEF3-211ENST00000488250 SCGB1A1P11684 91 aa10.6□□□□□ -0.71
RAPGEF3-211ENST00000488250 IGLV6-57P01721 117 aa10.59□□□□□ -0.71
RAPGEF3-211ENST00000488250 Q6ZRU5 148 aa10.59□□□□□ -0.71
RAPGEF3-211ENST00000488250 LECT2O14960 151 aa10.58□□□□□ -0.72
RAPGEF3-211ENST00000488250 S100A7L2Q5SY68 101 aa10.58□□□□□ -0.72
RAPGEF3-211ENST00000488250 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
RAPGEF3-211ENST00000488250 XGP55808 180 aa10.57□□□□□ -0.72
RAPGEF3-211ENST00000488250 NDUFC2-KCTD14E9PQ53 114 aa10.56□□□□□ -0.72
RAPGEF3-211ENST00000488250 XAGE1AQ9HD64 81 aa10.55□□□□□ -0.72
RAPGEF3-211ENST00000488250 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
RAPGEF3-211ENST00000488250 RPL18AQ02543 176 aaKnown RBP10.54□□□□□ -0.72
RAPGEF3-211ENST00000488250 C6orf99Q4VX62 202 aa10.54□□□□□ -0.72
RAPGEF3-211ENST00000488250 Q8N814 137 aa10.54□□□□□ -0.72
RAPGEF3-211ENST00000488250 SYCNQ0VAF6 134 aa10.54□□□□□ -0.72
RAPGEF3-211ENST00000488250 RMI2Q96E14 147 aa10.54□□□□□ -0.72
RAPGEF3-211ENST00000488250 MT-ATP8P03928 68 aa10.53□□□□□ -0.72
RAPGEF3-211ENST00000488250 ACYP1P07311 99 aa10.53□□□□□ -0.72
RAPGEF3-211ENST00000488250 OBSCN-AS1Q96MR7 158 aa10.53□□□□□ -0.72
RAPGEF3-211ENST00000488250 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
RAPGEF3-211ENST00000488250 ORMDL1Q9P0S3 153 aa10.53□□□□□ -0.72
RAPGEF3-211ENST00000488250 VPREB1P12018 145 aa10.52□□□□□ -0.72
RAPGEF3-211ENST00000488250 SNCGO76070 127 aa10.51□□□□□ -0.73
RAPGEF3-211ENST00000488250 C21orf62-AS1Q17RA5 79 aa10.51□□□□□ -0.73
RAPGEF3-211ENST00000488250 LINC00575Q6W349 94 aa10.5□□□□□ -0.73
RAPGEF3-211ENST00000488250 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
RAPGEF3-211ENST00000488250 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
RAPGEF3-211ENST00000488250 MEGF8Q7Z7M0 2845 aa10.5□□□□□ -0.73
RAPGEF3-211ENST00000488250 M0R378 163 aa10.49□□□□□ -0.73
RAPGEF3-211ENST00000488250 SLPIP03973 132 aa10.49□□□□□ -0.73
RAPGEF3-211ENST00000488250 Q6ZRP5 223 aa10.49□□□□□ -0.73
RAPGEF3-211ENST00000488250 TRAV23DV6A0A075B6W5 121 aa10.48□□□□□ -0.73
RAPGEF3-211ENST00000488250 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
RAPGEF3-211ENST00000488250 TRBV7-6A0A0J9YX20 115 aa10.47□□□□□ -0.73
RAPGEF3-211ENST00000488250 STAB2Q8WWQ8 2551 aa10.47□□□□□ -0.73
RAPGEF3-211ENST00000488250 TMEM256-PLSCR3K7ERE1 68 aa10.46□□□□□ -0.73
RAPGEF3-211ENST00000488250 GAGE2EQ4V326 116 aa10.46□□□□□ -0.73
RAPGEF3-211ENST00000488250 GAGE2DQ9UEU5 116 aa10.46□□□□□ -0.73
RAPGEF3-211ENST00000488250 DNAH9Q9NYC9 4486 aa10.46□□□□□ -0.74
RAPGEF3-211ENST00000488250 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.74
RAPGEF3-211ENST00000488250 DIRC1Q969H9 104 aa10.46□□□□□ -0.74
RAPGEF3-211ENST00000488250 DNAH1Q9P2D7 4330 aa10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 hADV29S1A0JD25 119 aa10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 CASC10Q5T4H9 136 aa10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 APLNQ9ULZ1 77 aa10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 PRKDCP78527 4128 aaKnown RBP10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 SDIM1Q6ZPB5 146 aa10.45□□□□□ -0.74
RAPGEF3-211ENST00000488250 PLA2G2DQ9UNK4 145 aa10.44□□□□□ -0.74
RAPGEF3-211ENST00000488250 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
RAPGEF3-211ENST00000488250 NHLRC4P0CG21 123 aaPredicted RBP10.43□□□□□ -0.74
RAPGEF3-211ENST00000488250 COL7A1Q02388 2944 aa10.42□□□□□ -0.74
RAPGEF3-211ENST00000488250 H3BQ85 93 aa10.42□□□□□ -0.74
RAPGEF3-211ENST00000488250 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
RAPGEF3-211ENST00000488250 Q6Q795 121 aa10.41□□□□□ -0.74
RAPGEF3-211ENST00000488250 C14orf132Q9NPU4 83 aa10.41□□□□□ -0.74
RAPGEF3-211ENST00000488250 COX7BP24311 80 aa10.41□□□□□ -0.74
RAPGEF3-211ENST00000488250 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
RAPGEF3-211ENST00000488250 KRTAP1-5Q9BYS1 174 aa10.39□□□□□ -0.75
RAPGEF3-211ENST00000488250 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
RAPGEF3-211ENST00000488250 IGLV5-37A0A075B6J1 123 aa10.39□□□□□ -0.75
RAPGEF3-211ENST00000488250 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
RAPGEF3-211ENST00000488250 GAGE2BQ13066 116 aa10.38□□□□□ -0.75
RAPGEF3-211ENST00000488250 LINC00643Q86TS7 51 aa10.38□□□□□ -0.75
RAPGEF3-211ENST00000488250 SERTAD4-AS1Q5TG53 156 aa10.37□□□□□ -0.75
RAPGEF3-211ENST00000488250 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.37□□□□□ -0.75
RAPGEF3-211ENST00000488250 UBE2DNLQ8IWF7 75 aa10.37□□□□□ -0.75
RAPGEF3-211ENST00000488250 NKAPP1Q8N9T2 125 aa10.37□□□□□ -0.75
RAPGEF3-211ENST00000488250 KCNQ1DNQ9H478 68 aa10.37□□□□□ -0.75
RAPGEF3-211ENST00000488250 SMCR5Q8TEV8 140 aa10.37□□□□□ -0.75
RAPGEF3-211ENST00000488250 Q6ZQY7 126 aa10.36□□□□□ -0.75
RAPGEF3-211ENST00000488250 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
RAPGEF3-211ENST00000488250 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
RAPGEF3-211ENST00000488250 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
RAPGEF3-211ENST00000488250 GHRHP01286 108 aa10.35□□□□□ -0.75
RAPGEF3-211ENST00000488250 CCKP06307 115 aa10.35□□□□□ -0.75
RAPGEF3-211ENST00000488250 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
RAPGEF3-211ENST00000488250 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
RAPGEF3-211ENST00000488250 IMUPQ9GZP8 106 aa10.33□□□□□ -0.76
RAPGEF3-211ENST00000488250 CNBPP62633 177 aaKnown RBP10.32□□□□□ -0.76
RAPGEF3-211ENST00000488250 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
RAPGEF3-211ENST00000488250 LOC110117498A0A087WWA1 95 aa10.3□□□□□ -0.76
RAPGEF3-211ENST00000488250 RBM3P98179 157 aaKnown RBP10.3□□□□□ -0.76
RAPGEF3-211ENST00000488250 KRTAP7-1Q8IUC3 87 aa10.29□□□□□ -0.76
RAPGEF3-211ENST00000488250 LINC00846Q9NV44 126 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms