RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
PKP4-213ENST00000486254 C9orf116Q5BN46 136 aaPredicted RBP7.95□□□□□ -1.14
PKP4-213ENST00000486254 CAMK2N2Q96S95 79 aa7.95□□□□□ -1.14
PKP4-213ENST00000486254 HUWE1Q7Z6Z7 4374 aaKnown RBP7.95□□□□□ -1.14
PKP4-213ENST00000486254 IGKV2D-24A0A075B6R9 120 aa7.93□□□□□ -1.14
PKP4-213ENST00000486254 STAB2Q8WWQ8 2551 aa7.93□□□□□ -1.14
PKP4-213ENST00000486254 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
PKP4-213ENST00000486254 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
PKP4-213ENST00000486254 IGLV6-57P01721 117 aa7.92□□□□□ -1.14
PKP4-213ENST00000486254 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
PKP4-213ENST00000486254 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
PKP4-213ENST00000486254 LINC00526Q96FQ7 95 aa7.91□□□□□ -1.14
PKP4-213ENST00000486254 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
PKP4-213ENST00000486254 LCE2BO14633 110 aa7.9□□□□□ -1.14
PKP4-213ENST00000486254 Q6ZRU5 148 aa7.9□□□□□ -1.14
PKP4-213ENST00000486254 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
PKP4-213ENST00000486254 DNAL4O96015 105 aa7.89□□□□□ -1.15
PKP4-213ENST00000486254 SYCNQ0VAF6 134 aa7.89□□□□□ -1.15
PKP4-213ENST00000486254 HIGD2BQ4VC39 106 aa7.89□□□□□ -1.15
PKP4-213ENST00000486254 Q8NDZ9 215 aa7.89□□□□□ -1.15
PKP4-213ENST00000486254 S100A7L2Q5SY68 101 aa7.88□□□□□ -1.15
PKP4-213ENST00000486254 TEX49A0A1B0GTD5 131 aa7.88□□□□□ -1.15
PKP4-213ENST00000486254 BAALC-AS2P0C853 105 aa7.88□□□□□ -1.15
PKP4-213ENST00000486254 APLNQ9ULZ1 77 aa7.88□□□□□ -1.15
PKP4-213ENST00000486254 A0A087WYN8 130 aa7.87□□□□□ -1.15
PKP4-213ENST00000486254 TRBV7-6A0A0J9YX20 115 aa7.87□□□□□ -1.15
PKP4-213ENST00000486254 NUPR2A6NF83 97 aa7.87□□□□□ -1.15
PKP4-213ENST00000486254 SNCGO76070 127 aa7.87□□□□□ -1.15
PKP4-213ENST00000486254 VPREB1P12018 145 aa7.87□□□□□ -1.15
PKP4-213ENST00000486254 Q9HAA7 133 aa7.87□□□□□ -1.15
PKP4-213ENST00000486254 NCR3O14931 201 aa7.86□□□□□ -1.15
PKP4-213ENST00000486254 INAFM2P0DMQ5 153 aa7.86□□□□□ -1.15
PKP4-213ENST00000486254 PLA2G2DQ9UNK4 145 aa7.86□□□□□ -1.15
PKP4-213ENST00000486254 USP17L23D6RBM5 183 aa7.85□□□□□ -1.15
PKP4-213ENST00000486254 PRR3P79522 188 aaKnown RBP7.85□□□□□ -1.15
PKP4-213ENST00000486254 CDIP1Q9H305 208 aa7.85□□□□□ -1.15
PKP4-213ENST00000486254 H3BQ85 93 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 M0R378 163 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 LECT2O14960 151 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
PKP4-213ENST00000486254 C22orf24Q9Y442 160 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 DNAH9Q9NYC9 4486 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 ACYP1P07311 99 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 C6orf99Q4VX62 202 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 Q8N814 137 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 SIGMAR1Q99720 223 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 XAGE1AQ9HD64 81 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 ORMDL1Q9P0S3 153 aa7.84□□□□□ -1.15
PKP4-213ENST00000486254 SCGB1A1P11684 91 aa7.83□□□□□ -1.16
PKP4-213ENST00000486254 KRTAP21-3Q3LHN1 58 aa7.83□□□□□ -1.16
PKP4-213ENST00000486254 LINC00575Q6W349 94 aa7.83□□□□□ -1.16
PKP4-213ENST00000486254 Q6ZRP5 223 aa7.83□□□□□ -1.16
PKP4-213ENST00000486254 IGLV5-37A0A075B6J1 123 aa7.82□□□□□ -1.16
PKP4-213ENST00000486254 TRAV23DV6A0A075B6W5 121 aa7.82□□□□□ -1.16
PKP4-213ENST00000486254 TRBV10-3A0A0K0K1G6 114 aa7.82□□□□□ -1.16
PKP4-213ENST00000486254 TTC32Q5I0X7 151 aa7.82□□□□□ -1.16
PKP4-213ENST00000486254 DIRC1Q969H9 104 aa7.82□□□□□ -1.16
PKP4-213ENST00000486254 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
PKP4-213ENST00000486254 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
PKP4-213ENST00000486254 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
PKP4-213ENST00000486254 TMEM256-PLSCR3K7ERE1 68 aa7.8□□□□□ -1.16
PKP4-213ENST00000486254 ZNF73O43830 326 aaPredicted RBP7.8□□□□□ -1.16
PKP4-213ENST00000486254 GHRHP01286 108 aa7.8□□□□□ -1.16
PKP4-213ENST00000486254 CNBPP62633 177 aaKnown RBP7.8□□□□□ -1.16
PKP4-213ENST00000486254 C14orf177Q52M58 125 aa7.8□□□□□ -1.16
PKP4-213ENST00000486254 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
PKP4-213ENST00000486254 SLPIP03973 132 aa7.79□□□□□ -1.16
PKP4-213ENST00000486254 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
PKP4-213ENST00000486254 KRTAP1-5Q9BYS1 174 aa7.79□□□□□ -1.16
PKP4-213ENST00000486254 JMJD7-PLA2G4BH0Y9G9 81 aa7.78□□□□□ -1.16
PKP4-213ENST00000486254 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
PKP4-213ENST00000486254 CASC10Q5T4H9 136 aa7.78□□□□□ -1.16
PKP4-213ENST00000486254 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
PKP4-213ENST00000486254 LOC107984640A0A0U1RRK4 108 aa7.77□□□□□ -1.17
PKP4-213ENST00000486254 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
PKP4-213ENST00000486254 PKIGQ9Y2B9 76 aa7.77□□□□□ -1.17
PKP4-213ENST00000486254 DNAH1Q9P2D7 4330 aa7.77□□□□□ -1.17
PKP4-213ENST00000486254 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.76□□□□□ -1.17
PKP4-213ENST00000486254 SDIM1Q6ZPB5 146 aa7.76□□□□□ -1.17
PKP4-213ENST00000486254 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
PKP4-213ENST00000486254 COX7BP24311 80 aa7.76□□□□□ -1.17
PKP4-213ENST00000486254 XGP55808 180 aa7.76□□□□□ -1.17
PKP4-213ENST00000486254 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
PKP4-213ENST00000486254 PCP4P48539 62 aa7.75□□□□□ -1.17
PKP4-213ENST00000486254 NBDYA0A0U1RRE5 68 aa7.74□□□□□ -1.17
PKP4-213ENST00000486254 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
PKP4-213ENST00000486254 LINC00528Q8N1L1 170 aa7.74□□□□□ -1.17
PKP4-213ENST00000486254 PRYO14603 147 aa7.73□□□□□ -1.17
PKP4-213ENST00000486254 PSCAO43653 123 aa7.72□□□□□ -1.17
PKP4-213ENST00000486254 SERTAD4-AS1Q5TG53 156 aa7.72□□□□□ -1.17
PKP4-213ENST00000486254 Q6Q795 121 aa7.72□□□□□ -1.17
PKP4-213ENST00000486254 C7orf33Q8WU49 177 aa7.72□□□□□ -1.17
PKP4-213ENST00000486254 MT-ATP8P03928 68 aa7.71□□□□□ -1.17
PKP4-213ENST00000486254 SPRR1AP35321 89 aa7.71□□□□□ -1.17
PKP4-213ENST00000486254 C16orf90A8MZG2 172 aa7.71□□□□□ -1.18
PKP4-213ENST00000486254 Q6ZRN7 208 aaPredicted RBP7.7□□□□□ -1.18
PKP4-213ENST00000486254 IGLV1-50A0A075B6I6 118 aa7.69□□□□□ -1.18
PKP4-213ENST00000486254 PDE6GP18545 87 aa7.69□□□□□ -1.18
PKP4-213ENST00000486254 Q6ZQY7 126 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms