RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 LCE1EQ5T753 118 aa5.6□□□□□ -1.51
COL8A1-207ENST00000483969 Q6ZRP5 223 aa5.6□□□□□ -1.51
COL8A1-207ENST00000483969 MAP1LC3CQ9BXW4 147 aa5.6□□□□□ -1.51
COL8A1-207ENST00000483969 GAGE2DQ9UEU5 116 aa5.6□□□□□ -1.51
COL8A1-207ENST00000483969 A0A1W2PNN7 141 aa5.59□□□□□ -1.51
COL8A1-207ENST00000483969 H0Y8G0 127 aa5.59□□□□□ -1.51
COL8A1-207ENST00000483969 ATP6V1G1O75348 118 aa5.59□□□□□ -1.51
COL8A1-207ENST00000483969 SFTA2Q6UW10 78 aa5.59□□□□□ -1.51
COL8A1-207ENST00000483969 TMEM223A0PJW6 202 aa5.57□□□□□ -1.52
COL8A1-207ENST00000483969 PLNP26678 52 aa5.57□□□□□ -1.52
COL8A1-207ENST00000483969 COA6Q5JTJ3 125 aaKnown RBP5.57□□□□□ -1.52
COL8A1-207ENST00000483969 DPM2O94777 84 aa5.56□□□□□ -1.52
COL8A1-207ENST00000483969 IGKCP01834 107 aa5.55□□□□□ -1.52
COL8A1-207ENST00000483969 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
COL8A1-207ENST00000483969 HERVK_113P61574 105 aa5.55□□□□□ -1.52
COL8A1-207ENST00000483969 COX17Q14061 63 aa5.55□□□□□ -1.52
COL8A1-207ENST00000483969 FAM168BA1KXE4 195 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 LINC00587B1AMM8 73 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 SYS1-DBNDD2H3BUS1 97 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 PFN2P35080 140 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 LBHQ53QV2 105 aaPredicted RBP5.54□□□□□ -1.52
COL8A1-207ENST00000483969 C9orf129Q5T035 196 aaKnown RBP5.54□□□□□ -1.52
COL8A1-207ENST00000483969 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 PHF5AQ7RTV0 110 aaKnown RBP5.54□□□□□ -1.52
COL8A1-207ENST00000483969 FAM19A5Q7Z5A7 132 aaPredicted RBP5.54□□□□□ -1.52
COL8A1-207ENST00000483969 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 ERG28Q9UKR5 140 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 FAT1Q14517 4588 aa5.54□□□□□ -1.52
COL8A1-207ENST00000483969 LEPROTO15243 131 aa5.53□□□□□ -1.52
COL8A1-207ENST00000483969 HERV-K104P63124 156 aa5.53□□□□□ -1.52
COL8A1-207ENST00000483969 MPLKIPQ8TAP9 179 aa5.53□□□□□ -1.52
COL8A1-207ENST00000483969 PLEKHB2Q96CS7 222 aa5.53□□□□□ -1.52
COL8A1-207ENST00000483969 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
COL8A1-207ENST00000483969 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
COL8A1-207ENST00000483969 C22orf24Q9Y442 160 aa5.53□□□□□ -1.52
COL8A1-207ENST00000483969 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
COL8A1-207ENST00000483969 M0QXV9 152 aa5.52□□□□□ -1.53
COL8A1-207ENST00000483969 LINC00158P58513 81 aa5.52□□□□□ -1.53
COL8A1-207ENST00000483969 UBE2BP63146 152 aa5.52□□□□□ -1.53
COL8A1-207ENST00000483969 PRR3P79522 188 aaKnown RBP5.52□□□□□ -1.53
COL8A1-207ENST00000483969 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
COL8A1-207ENST00000483969 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
COL8A1-207ENST00000483969 TP73-AS1Q9UF72 201 aa5.51□□□□□ -1.53
COL8A1-207ENST00000483969 C20orf202A1L168 122 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 J3QQQ9 107 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 OXTP01178 125 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 S100A6P06703 90 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 C3orf79P0CE67 100 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 LGALS3P17931 250 aaKnown RBP5.5□□□□□ -1.53
COL8A1-207ENST00000483969 S100A2P29034 98 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 NMUP48645 174 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 AKR1D1P51857 326 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 KRTDAPP60985 99 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 RPL24P83731 157 aaKnown RBP5.5□□□□□ -1.53
COL8A1-207ENST00000483969 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 C1orf137Q5JT78 98 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 SERTAD4-AS1Q5TG53 156 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 LINC01545Q5VT33 79 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 PSORS1C2Q9UIG4 136 aa5.5□□□□□ -1.53
COL8A1-207ENST00000483969 E9PLD3 99 aa5.49□□□□□ -1.53
COL8A1-207ENST00000483969 MRPL55Q7Z7F7 128 aaKnown RBP5.49□□□□□ -1.53
COL8A1-207ENST00000483969 NKAPP1Q8N9T2 125 aa5.49□□□□□ -1.53
COL8A1-207ENST00000483969 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
COL8A1-207ENST00000483969 A0A0U1RRA0 63 aa5.48□□□□□ -1.53
COL8A1-207ENST00000483969 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
COL8A1-207ENST00000483969 MT3P25713 68 aa5.48□□□□□ -1.53
COL8A1-207ENST00000483969 HNRNPA3P51991 378 aaKnown RBP5.48□□□□□ -1.53
COL8A1-207ENST00000483969 SRSF9Q13242 221 aaKnown RBP eCLIP5.48□□□□□ -1.53
COL8A1-207ENST00000483969 VPS13BQ7Z7G8 4022 aa5.47□□□□□ -1.53
COL8A1-207ENST00000483969 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
COL8A1-207ENST00000483969 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
COL8A1-207ENST00000483969 TSPEAR-AS2P59090 65 aa5.46□□□□□ -1.54
COL8A1-207ENST00000483969 REG3GQ6UW15 175 aa5.46□□□□□ -1.54
COL8A1-207ENST00000483969 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
COL8A1-207ENST00000483969 MIR7-3HGQ8N6C7 128 aa5.46□□□□□ -1.54
COL8A1-207ENST00000483969 ABCA13Q86UQ4 5058 aa5.45□□□□□ -1.54
COL8A1-207ENST00000483969 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
COL8A1-207ENST00000483969 GAGE10A6NGK3 116 aa5.45□□□□□ -1.54
COL8A1-207ENST00000483969 VPREB1P12018 145 aa5.45□□□□□ -1.54
COL8A1-207ENST00000483969 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
COL8A1-207ENST00000483969 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
COL8A1-207ENST00000483969 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
COL8A1-207ENST00000483969 M0R378 163 aa5.44□□□□□ -1.54
COL8A1-207ENST00000483969 SNRPEP62304 92 aaKnown RBP5.44□□□□□ -1.54
COL8A1-207ENST00000483969 BOD1L2Q8IYS8 172 aa5.44□□□□□ -1.54
COL8A1-207ENST00000483969 HIST1H2BLQ99880 126 aa5.44□□□□□ -1.54
COL8A1-207ENST00000483969 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
COL8A1-207ENST00000483969 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
COL8A1-207ENST00000483969 ZNF861PO60384 105 aa5.43□□□□□ -1.54
COL8A1-207ENST00000483969 BCE1O60756 84 aa5.43□□□□□ -1.54
COL8A1-207ENST00000483969 MIEN1Q9BRT3 115 aa5.43□□□□□ -1.54
COL8A1-207ENST00000483969 IGLV1-50A0A075B6I6 118 aa5.42□□□□□ -1.54
COL8A1-207ENST00000483969 IGKV2D-26A0A0A0MRZ7 120 aa5.42□□□□□ -1.54
COL8A1-207ENST00000483969 LOC107984156A0A0G2JMH3 177 aa5.42□□□□□ -1.54
COL8A1-207ENST00000483969 RPL28P46779 137 aaKnown RBP5.42□□□□□ -1.54
COL8A1-207ENST00000483969 ARL17AQ8IVW1 177 aa5.42□□□□□ -1.54
COL8A1-207ENST00000483969 IGKV2-28A0A075B6P5 120 aa5.41□□□□□ -1.54
COL8A1-207ENST00000483969 C5orf52A6NGY3 159 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms