RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
SSBP1-210ENST00000481508 PHF5AQ7RTV0 110 aaKnown RBP6.59□□□□□ -1.35
SSBP1-210ENST00000481508 KRTAP11-1Q8IUC1 163 aa6.59□□□□□ -1.35
SSBP1-210ENST00000481508 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.35
SSBP1-210ENST00000481508 H3BS24 57 aa6.58□□□□□ -1.36
SSBP1-210ENST00000481508 FAM19A5Q7Z5A7 132 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-210ENST00000481508 XAGE1AQ9HD64 81 aa6.58□□□□□ -1.36
SSBP1-210ENST00000481508 TSPEAR-AS2P59090 65 aa6.57□□□□□ -1.36
SSBP1-210ENST00000481508 ZNF625Q96I27 306 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-210ENST00000481508 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
SSBP1-210ENST00000481508 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
SSBP1-210ENST00000481508 SYS1-DBNDD2H3BUS1 97 aa6.55□□□□□ -1.36
SSBP1-210ENST00000481508 PFN2P35080 140 aa6.55□□□□□ -1.36
SSBP1-210ENST00000481508 C7orf33Q8WU49 177 aa6.55□□□□□ -1.36
SSBP1-210ENST00000481508 MAP1LC3CQ9BXW4 147 aa6.55□□□□□ -1.36
SSBP1-210ENST00000481508 DPM2O94777 84 aa6.54□□□□□ -1.36
SSBP1-210ENST00000481508 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
SSBP1-210ENST00000481508 ERG28Q9UKR5 140 aa6.54□□□□□ -1.36
SSBP1-210ENST00000481508 M0QXV9 152 aa6.53□□□□□ -1.36
SSBP1-210ENST00000481508 IGKCP01834 107 aa6.53□□□□□ -1.36
SSBP1-210ENST00000481508 C3orf79P0CE67 100 aa6.53□□□□□ -1.36
SSBP1-210ENST00000481508 PLNP26678 52 aa6.53□□□□□ -1.36
SSBP1-210ENST00000481508 Q8NDZ9 215 aa6.53□□□□□ -1.36
SSBP1-210ENST00000481508 LINC01545Q5VT33 79 aa6.52□□□□□ -1.37
SSBP1-210ENST00000481508 PSORS1C2Q9UIG4 136 aa6.52□□□□□ -1.37
SSBP1-210ENST00000481508 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
SSBP1-210ENST00000481508 LEPROTO15243 131 aa6.51□□□□□ -1.37
SSBP1-210ENST00000481508 KRTDAPP60985 99 aa6.51□□□□□ -1.37
SSBP1-210ENST00000481508 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
SSBP1-210ENST00000481508 PET117Q6UWS5 81 aa6.5□□□□□ -1.37
SSBP1-210ENST00000481508 HIST3H2BBQ8N257 126 aa6.5□□□□□ -1.37
SSBP1-210ENST00000481508 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
SSBP1-210ENST00000481508 C22orf24Q9Y442 160 aa6.5□□□□□ -1.37
SSBP1-210ENST00000481508 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
SSBP1-210ENST00000481508 TNXBP22105 4242 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 IGKV2D-26A0A0A0MRZ7 120 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 J3QQQ9 107 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 VPREB1P12018 145 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 LINC00158P58513 81 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 UBE2BP63146 152 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 C1orf137Q5JT78 98 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 PLEKHB2Q96CS7 222 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 HIST1H2BLQ99880 126 aa6.48□□□□□ -1.37
SSBP1-210ENST00000481508 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 GAGE10A6NGK3 116 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 E9PLD3 99 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 HERVK_113P61574 105 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
SSBP1-210ENST00000481508 COX17Q14061 63 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 MEIG1Q5JSS6 88 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 SFTA2Q6UW10 78 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 LINC00167Q96N53 147 aa6.47□□□□□ -1.37
SSBP1-210ENST00000481508 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 RPL37AP8A6NKH3 93 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 LGALS3P17931 250 aaKnown RBP6.46□□□□□ -1.38
SSBP1-210ENST00000481508 HERV-K104P63124 156 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 MRPL55Q7Z7F7 128 aaKnown RBP6.46□□□□□ -1.38
SSBP1-210ENST00000481508 ATOH7Q8N100 152 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 DAND5Q8N907 189 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 TP73-AS1Q9UF72 201 aa6.46□□□□□ -1.38
SSBP1-210ENST00000481508 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
SSBP1-210ENST00000481508 SNRPEP62304 92 aaKnown RBP6.45□□□□□ -1.38
SSBP1-210ENST00000481508 ANKRD39Q53RE8 183 aa6.44□□□□□ -1.38
SSBP1-210ENST00000481508 FAT4Q6V0I7 4981 aa6.44□□□□□ -1.38
SSBP1-210ENST00000481508 A0A0J9YXY3 114 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 C5orf52A6NGY3 159 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 S100A6P06703 90 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 NMUP48645 174 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 LBHQ53QV2 105 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-210ENST00000481508 ADAMTSL4-AS1Q5T5F5 129 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 NKAPP1Q8N9T2 125 aa6.43□□□□□ -1.38
SSBP1-210ENST00000481508 IGKV2-28A0A075B6P5 120 aa6.42□□□□□ -1.38
SSBP1-210ENST00000481508 IGKV2D-28P01615 120 aa6.42□□□□□ -1.38
SSBP1-210ENST00000481508 S100A2P29034 98 aa6.42□□□□□ -1.38
SSBP1-210ENST00000481508 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
SSBP1-210ENST00000481508 LITAFQ99732 161 aa6.42□□□□□ -1.38
SSBP1-210ENST00000481508 C20orf202A1L168 122 aa6.41□□□□□ -1.38
SSBP1-210ENST00000481508 NCR3O14931 201 aa6.41□□□□□ -1.38
SSBP1-210ENST00000481508 OXTP01178 125 aa6.41□□□□□ -1.38
SSBP1-210ENST00000481508 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
SSBP1-210ENST00000481508 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
SSBP1-210ENST00000481508 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.38
SSBP1-210ENST00000481508 ZNF815PA8K554 130 aa6.4□□□□□ -1.38
SSBP1-210ENST00000481508 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
SSBP1-210ENST00000481508 NPC2P61916 151 aa6.4□□□□□ -1.38
SSBP1-210ENST00000481508 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
SSBP1-210ENST00000481508 RPL24P83731 157 aaKnown RBP6.39□□□□□ -1.39
SSBP1-210ENST00000481508 PCP2Q8IVA1 136 aa6.39□□□□□ -1.39
SSBP1-210ENST00000481508 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
SSBP1-210ENST00000481508 LINC00587B1AMM8 73 aa6.38□□□□□ -1.39
SSBP1-210ENST00000481508 H0Y9J4 135 aa6.38□□□□□ -1.39
SSBP1-210ENST00000481508 M0R378 163 aa6.38□□□□□ -1.39
SSBP1-210ENST00000481508 BCE1O60756 84 aa6.38□□□□□ -1.39
SSBP1-210ENST00000481508 KRTAP13-1Q8IUC0 172 aa6.38□□□□□ -1.39
SSBP1-210ENST00000481508 ZNF861PO60384 105 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms