RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 MRPL18Q9H0U6 180 aaKnown RBP6.81□□□□□ -1.32
CPSF7-211ENST00000477890 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
CPSF7-211ENST00000477890 LINC01546A6NGU7 62 aa6.8□□□□□ -1.32
CPSF7-211ENST00000477890 H3BRM9 83 aa6.8□□□□□ -1.32
CPSF7-211ENST00000477890 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
CPSF7-211ENST00000477890 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
CPSF7-211ENST00000477890 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
CPSF7-211ENST00000477890 TRAV9-1A0A075B6T8 112 aa6.78□□□□□ -1.32
CPSF7-211ENST00000477890 VPREB1P12018 145 aa6.78□□□□□ -1.32
CPSF7-211ENST00000477890 PYY3Q5JQD4 70 aa6.78□□□□□ -1.32
CPSF7-211ENST00000477890 FA2HQ7L5A8 372 aa6.78□□□□□ -1.32
CPSF7-211ENST00000477890 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
CPSF7-211ENST00000477890 FAT4Q6V0I7 4981 aa6.77□□□□□ -1.33
CPSF7-211ENST00000477890 DDTP30046 118 aa6.77□□□□□ -1.33
CPSF7-211ENST00000477890 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
CPSF7-211ENST00000477890 HIST3H2BBQ8N257 126 aa6.77□□□□□ -1.33
CPSF7-211ENST00000477890 GNB1LQ9BYB4 327 aa6.77□□□□□ -1.33
CPSF7-211ENST00000477890 ERG28Q9UKR5 140 aa6.77□□□□□ -1.33
CPSF7-211ENST00000477890 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
CPSF7-211ENST00000477890 M0R378 163 aa6.76□□□□□ -1.33
CPSF7-211ENST00000477890 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
CPSF7-211ENST00000477890 C3orf22Q8N5N4 141 aa6.76□□□□□ -1.33
CPSF7-211ENST00000477890 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
CPSF7-211ENST00000477890 C14orf144Q96I85 54 aa6.76□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BKO60814 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BJP06899 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 ZNF22P17026 224 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BOP23527 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BBP33778 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BDP58876 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BCP62807 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 COX17Q14061 63 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST2H2BEQ16778 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BHQ93079 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 ZNF625Q96I27 306 aaPredicted RBP6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BNQ99877 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 HIST1H2BMQ99879 126 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
CPSF7-211ENST00000477890 Q8NDZ9 215 aa6.74□□□□□ -1.33
CPSF7-211ENST00000477890 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
CPSF7-211ENST00000477890 A0A1B0GV90 55 aa6.73□□□□□ -1.33
CPSF7-211ENST00000477890 COX19Q49B96 90 aa6.73□□□□□ -1.33
CPSF7-211ENST00000477890 TRGC2P03986 189 aa6.72□□□□□ -1.33
CPSF7-211ENST00000477890 FABP4P15090 132 aa6.72□□□□□ -1.33
CPSF7-211ENST00000477890 JOSD1Q15040 202 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-211ENST00000477890 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
CPSF7-211ENST00000477890 A0A096LNJ9 63 aa6.71□□□□□ -1.34
CPSF7-211ENST00000477890 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.34
CPSF7-211ENST00000477890 SPRR4Q96PI1 79 aa6.71□□□□□ -1.34
CPSF7-211ENST00000477890 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 LINC00158P58513 81 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 COA6Q5JTJ3 125 aaKnown RBP6.7□□□□□ -1.34
CPSF7-211ENST00000477890 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 SFTA2Q6UW10 78 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 HIST1H2BLQ99880 126 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
CPSF7-211ENST00000477890 HBDP02042 147 aa6.69□□□□□ -1.34
CPSF7-211ENST00000477890 PMCHL1Q16048 86 aa6.69□□□□□ -1.34
CPSF7-211ENST00000477890 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
CPSF7-211ENST00000477890 BAGE3Q86Y29 109 aa6.69□□□□□ -1.34
CPSF7-211ENST00000477890 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
CPSF7-211ENST00000477890 A0A0U1RRA0 63 aa6.68□□□□□ -1.34
CPSF7-211ENST00000477890 LINC00614P0C842 121 aa6.68□□□□□ -1.34
CPSF7-211ENST00000477890 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-211ENST00000477890 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
CPSF7-211ENST00000477890 C18orf32Q8TCD1 76 aa6.68□□□□□ -1.34
CPSF7-211ENST00000477890 ZNF706Q9Y5V0 76 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-211ENST00000477890 DAND5Q8N907 189 aa6.67□□□□□ -1.34
CPSF7-211ENST00000477890 Q8NBF4 154 aa6.67□□□□□ -1.34
CPSF7-211ENST00000477890 M0R143 59 aa6.66□□□□□ -1.34
CPSF7-211ENST00000477890 PRYO14603 147 aa6.66□□□□□ -1.34
CPSF7-211ENST00000477890 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.34
CPSF7-211ENST00000477890 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
CPSF7-211ENST00000477890 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.34
CPSF7-211ENST00000477890 TRAPPC1Q9Y5R8 145 aa6.65□□□□□ -1.34
CPSF7-211ENST00000477890 NCR3O14931 201 aa6.64□□□□□ -1.35
CPSF7-211ENST00000477890 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
CPSF7-211ENST00000477890 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
CPSF7-211ENST00000477890 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
CPSF7-211ENST00000477890 TMEM223A0PJW6 202 aa6.63□□□□□ -1.35
CPSF7-211ENST00000477890 SPINK1P00995 79 aa6.63□□□□□ -1.35
CPSF7-211ENST00000477890 ASB16-AS1Q495Z4 193 aa6.63□□□□□ -1.35
CPSF7-211ENST00000477890 MEIG1Q5JSS6 88 aa6.63□□□□□ -1.35
CPSF7-211ENST00000477890 ETDCA0A1B0GVM5 59 aa6.62□□□□□ -1.35
CPSF7-211ENST00000477890 SPRR1AP35321 89 aa6.62□□□□□ -1.35
CPSF7-211ENST00000477890 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
CPSF7-211ENST00000477890 KCNQ1DNQ9H478 68 aa6.62□□□□□ -1.35
CPSF7-211ENST00000477890 KRTAP4-16G5E9R7 235 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-211ENST00000477890 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
CPSF7-211ENST00000477890 TRBV10-3A0A0K0K1G6 114 aa6.6□□□□□ -1.35
CPSF7-211ENST00000477890 SCGB1D1O95968 90 aa6.6□□□□□ -1.35
CPSF7-211ENST00000477890 LINC01547P58512 204 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-211ENST00000477890 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
CPSF7-211ENST00000477890 SNHG12Q9BXW3 62 aa6.6□□□□□ -1.35
CPSF7-211ENST00000477890 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
CPSF7-211ENST00000477890 TRAV12-1A0A0B4J245 112 aa6.59□□□□□ -1.35
CPSF7-211ENST00000477890 DLEU1O43261 78 aa6.59□□□□□ -1.35
CPSF7-211ENST00000477890 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms