RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MIR7-3HGQ8N6C7 128 aa9.69□□□□□ -0.86
SEC13-215ENST00000477547 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
SEC13-215ENST00000477547 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
SEC13-215ENST00000477547 EPM2AB3EWF7 344 aa9.68□□□□□ -0.86
SEC13-215ENST00000477547 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
SEC13-215ENST00000477547 DAND5Q8N907 189 aa9.68□□□□□ -0.86
SEC13-215ENST00000477547 A0A1W2PNN7 141 aa9.66□□□□□ -0.86
SEC13-215ENST00000477547 TIMM17BO60830 172 aa9.66□□□□□ -0.86
SEC13-215ENST00000477547 TP73-AS1Q9UF72 201 aa9.66□□□□□ -0.86
SEC13-215ENST00000477547 SERTAD4-AS1Q5TG53 156 aa9.65□□□□□ -0.86
SEC13-215ENST00000477547 VPS13BQ7Z7G8 4022 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 M0QXV9 152 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 COX8AP10176 69 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 LITAFQ99732 161 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 MIEN1Q9BRT3 115 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 DNAH8Q96JB1 4490 aa9.64□□□□□ -0.87
SEC13-215ENST00000477547 LOC105371267A0A1B0GV96 52 aa9.63□□□□□ -0.87
SEC13-215ENST00000477547 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
SEC13-215ENST00000477547 SMIM6P0DI80 62 aa9.62□□□□□ -0.87
SEC13-215ENST00000477547 NPC2P61916 151 aa9.62□□□□□ -0.87
SEC13-215ENST00000477547 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
SEC13-215ENST00000477547 BOD1L2Q8IYS8 172 aa9.62□□□□□ -0.87
SEC13-215ENST00000477547 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
SEC13-215ENST00000477547 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
SEC13-215ENST00000477547 LINC00528Q8N1L1 170 aa9.61□□□□□ -0.87
SEC13-215ENST00000477547 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
SEC13-215ENST00000477547 C14orf144Q96I85 54 aa9.61□□□□□ -0.87
SEC13-215ENST00000477547 VPREB1P12018 145 aa9.6□□□□□ -0.87
SEC13-215ENST00000477547 S100A12P80511 92 aa9.6□□□□□ -0.87
SEC13-215ENST00000477547 PHF5AQ7RTV0 110 aaKnown RBP9.6□□□□□ -0.87
SEC13-215ENST00000477547 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
SEC13-215ENST00000477547 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
SEC13-215ENST00000477547 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
SEC13-215ENST00000477547 FLG2Q5D862 2391 aaPredicted RBP9.6□□□□□ -0.87
SEC13-215ENST00000477547 IGLV5-37A0A075B6J1 123 aa9.59□□□□□ -0.87
SEC13-215ENST00000477547 DLEU1O43261 78 aa9.59□□□□□ -0.87
SEC13-215ENST00000477547 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
SEC13-215ENST00000477547 SOSTDC1Q6X4U4 206 aa9.59□□□□□ -0.87
SEC13-215ENST00000477547 Q8NDZ9 215 aa9.59□□□□□ -0.87
SEC13-215ENST00000477547 SLC25A34Q6PIV7 304 aa9.58□□□□□ -0.88
SEC13-215ENST00000477547 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
SEC13-215ENST00000477547 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
SEC13-215ENST00000477547 UBE2BP63146 152 aa9.57□□□□□ -0.88
SEC13-215ENST00000477547 Q5VSD8 79 aa9.57□□□□□ -0.88
SEC13-215ENST00000477547 MRPL55Q7Z7F7 128 aaKnown RBP9.57□□□□□ -0.88
SEC13-215ENST00000477547 LOC107984156A0A0G2JMH3 177 aa9.56□□□□□ -0.88
SEC13-215ENST00000477547 NCR3O14931 201 aa9.56□□□□□ -0.88
SEC13-215ENST00000477547 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
SEC13-215ENST00000477547 ARL17AQ8IVW1 177 aa9.56□□□□□ -0.88
SEC13-215ENST00000477547 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
SEC13-215ENST00000477547 SRRM2Q9UQ35 2752 aaKnown RBP9.56□□□□□ -0.88
SEC13-215ENST00000477547 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
SEC13-215ENST00000477547 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
SEC13-215ENST00000477547 Q6ZVH6 145 aa9.56□□□□□ -0.88
SEC13-215ENST00000477547 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
SEC13-215ENST00000477547 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
SEC13-215ENST00000477547 IFITM1P13164 125 aa9.54□□□□□ -0.88
SEC13-215ENST00000477547 RPL37AP61513 92 aaKnown RBP9.54□□□□□ -0.88
SEC13-215ENST00000477547 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
SEC13-215ENST00000477547 NDUFC2O95298 119 aa9.53□□□□□ -0.88
SEC13-215ENST00000477547 PRR3P79522 188 aaKnown RBP9.53□□□□□ -0.88
SEC13-215ENST00000477547 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
SEC13-215ENST00000477547 LINC00167Q96N53 147 aa9.53□□□□□ -0.88
SEC13-215ENST00000477547 RPL37AP8A6NKH3 93 aa9.52□□□□□ -0.89
SEC13-215ENST00000477547 M0R378 163 aa9.52□□□□□ -0.89
SEC13-215ENST00000477547 KRTAP11-1Q8IUC1 163 aa9.52□□□□□ -0.89
SEC13-215ENST00000477547 HIGD1BQ9P298 99 aa9.52□□□□□ -0.89
SEC13-215ENST00000477547 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 IGKV2-28A0A075B6P5 120 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 IGKV2D-28P01615 120 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
SEC13-215ENST00000477547 MUSTN1Q8IVN3 82 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 HIST1H4GQ99525 98 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 UQCR10Q9UDW1 63 aa9.51□□□□□ -0.89
SEC13-215ENST00000477547 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
SEC13-215ENST00000477547 C12orf57Q99622 126 aa9.5□□□□□ -0.89
SEC13-215ENST00000477547 PSORS1C2Q9UIG4 136 aa9.5□□□□□ -0.89
SEC13-215ENST00000477547 J3QL48 77 aa9.49□□□□□ -0.89
SEC13-215ENST00000477547 PRO1933Q9H354 126 aa9.49□□□□□ -0.89
SEC13-215ENST00000477547 IGLV1-50A0A075B6I6 118 aa9.47□□□□□ -0.89
SEC13-215ENST00000477547 TRBV10-3A0A0K0K1G6 114 aa9.47□□□□□ -0.89
SEC13-215ENST00000477547 DDTP30046 118 aa9.46□□□□□ -0.9
SEC13-215ENST00000477547 HNRNPA3P51991 378 aaKnown RBP9.46□□□□□ -0.9
SEC13-215ENST00000477547 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
SEC13-215ENST00000477547 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
SEC13-215ENST00000477547 S100A7L2Q5SY68 101 aa9.46□□□□□ -0.9
SEC13-215ENST00000477547 A4D1N5 150 aa9.44□□□□□ -0.9
SEC13-215ENST00000477547 PRYO14603 147 aa9.44□□□□□ -0.9
SEC13-215ENST00000477547 TAL2Q16559 108 aa9.44□□□□□ -0.9
SEC13-215ENST00000477547 LINC00518Q8N0U6 118 aa9.44□□□□□ -0.9
SEC13-215ENST00000477547 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
SEC13-215ENST00000477547 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
SEC13-215ENST00000477547 HSD52Q0P140 79 aa9.43□□□□□ -0.9
SEC13-215ENST00000477547 REG3GQ6UW15 175 aa9.43□□□□□ -0.9
SEC13-215ENST00000477547 OR13C6PQ8NH95 151 aa9.43□□□□□ -0.9
SEC13-215ENST00000477547 TMEM126AQ9H061 195 aa9.43□□□□□ -0.9
SEC13-215ENST00000477547 TSTD3H0UI37 97 aa9.42□□□□□ -0.9
SEC13-215ENST00000477547 TRAV23DV6A0A075B6W5 121 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 241.7 ms