RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 Q8NDZ9 215 aa7.39□□□□□ -1.23
HLA-DMB-260ENST00000477537 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
HLA-DMB-260ENST00000477537 HUWE1Q7Z6Z7 4374 aaKnown RBP7.39□□□□□ -1.23
HLA-DMB-260ENST00000477537 LECT2O14960 151 aa7.39□□□□□ -1.23
HLA-DMB-260ENST00000477537 MUC7Q8TAX7 377 aa7.39□□□□□ -1.23
HLA-DMB-260ENST00000477537 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
HLA-DMB-260ENST00000477537 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
HLA-DMB-260ENST00000477537 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
HLA-DMB-260ENST00000477537 KRTAP26-1Q6PEX3 210 aa7.38□□□□□ -1.23
HLA-DMB-260ENST00000477537 TMEM126AQ9H061 195 aa7.38□□□□□ -1.23
HLA-DMB-260ENST00000477537 A0A1B0GV72 72 aa7.37□□□□□ -1.23
HLA-DMB-260ENST00000477537 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
HLA-DMB-260ENST00000477537 FAM240AA0A1B0GVK7 77 aa7.37□□□□□ -1.23
HLA-DMB-260ENST00000477537 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
HLA-DMB-260ENST00000477537 LINC01556Q5JQF7 62 aa7.37□□□□□ -1.23
HLA-DMB-260ENST00000477537 C15orf53Q8NAA6 179 aa7.37□□□□□ -1.23
HLA-DMB-260ENST00000477537 S100A7L2Q5SY68 101 aa7.36□□□□□ -1.23
HLA-DMB-260ENST00000477537 MRAPQ8TCY5 172 aa7.36□□□□□ -1.23
HLA-DMB-260ENST00000477537 TRAV10A0A0B4J240 114 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 K7EIL1 84 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 SLPIP03973 132 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 CAMK2N2Q96S95 79 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 TM2D3Q9BRN9 247 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 C1orf43Q9BWL3 253 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 SNCGO76070 127 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
HLA-DMB-260ENST00000477537 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
HLA-DMB-260ENST00000477537 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 C6orf99Q4VX62 202 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 DNAH10OSP0CZ25 163 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 RPL18AQ02543 176 aaKnown RBP7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 TTC32Q5I0X7 151 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 Q8N814 137 aa7.33□□□□□ -1.24
HLA-DMB-260ENST00000477537 A0A1B0GX51 115 aa7.32□□□□□ -1.24
HLA-DMB-260ENST00000477537 ACYP1P07311 99 aa7.32□□□□□ -1.24
HLA-DMB-260ENST00000477537 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
HLA-DMB-260ENST00000477537 Q6ZRU5 148 aa7.32□□□□□ -1.24
HLA-DMB-260ENST00000477537 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
HLA-DMB-260ENST00000477537 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
HLA-DMB-260ENST00000477537 IGLV6-57P01721 117 aa7.31□□□□□ -1.24
HLA-DMB-260ENST00000477537 LINC00588Q9Y4M8 146 aa7.31□□□□□ -1.24
HLA-DMB-260ENST00000477537 GAGE2BQ13066 116 aa7.3□□□□□ -1.24
HLA-DMB-260ENST00000477537 GAGE2EQ4V326 116 aa7.3□□□□□ -1.24
HLA-DMB-260ENST00000477537 GAGE2AQ6NT46 116 aa7.3□□□□□ -1.24
HLA-DMB-260ENST00000477537 GAGE2DQ9UEU5 116 aa7.3□□□□□ -1.24
HLA-DMB-260ENST00000477537 FBN3Q75N90 2809 aa7.3□□□□□ -1.24
HLA-DMB-260ENST00000477537 OBSCN-AS1Q96MR7 158 aa7.29□□□□□ -1.24
HLA-DMB-260ENST00000477537 C14orf132Q9NPU4 83 aa7.29□□□□□ -1.24
HLA-DMB-260ENST00000477537 TGP01266 2768 aa7.29□□□□□ -1.24
HLA-DMB-260ENST00000477537 TRBV10-3A0A0K0K1G6 114 aa7.29□□□□□ -1.24
HLA-DMB-260ENST00000477537 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
HLA-DMB-260ENST00000477537 STAB2Q8WWQ8 2551 aa7.28□□□□□ -1.24
HLA-DMB-260ENST00000477537 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
HLA-DMB-260ENST00000477537 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.25
HLA-DMB-260ENST00000477537 TRAV23DV6A0A075B6W5 121 aa7.27□□□□□ -1.25
HLA-DMB-260ENST00000477537 F8WDY8 70 aa7.27□□□□□ -1.25
HLA-DMB-260ENST00000477537 VPREB1P12018 145 aa7.27□□□□□ -1.25
HLA-DMB-260ENST00000477537 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
HLA-DMB-260ENST00000477537 Q6Q795 121 aa7.26□□□□□ -1.25
HLA-DMB-260ENST00000477537 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
HLA-DMB-260ENST00000477537 TMEM256-PLSCR3K7ERE1 68 aa7.25□□□□□ -1.25
HLA-DMB-260ENST00000477537 DIRC1Q969H9 104 aa7.25□□□□□ -1.25
HLA-DMB-260ENST00000477537 Q6ZRP5 223 aa7.25□□□□□ -1.25
HLA-DMB-260ENST00000477537 M0R378 163 aa7.24□□□□□ -1.25
HLA-DMB-260ENST00000477537 SDIM1Q6ZPB5 146 aa7.24□□□□□ -1.25
HLA-DMB-260ENST00000477537 LINC00643Q86TS7 51 aa7.24□□□□□ -1.25
HLA-DMB-260ENST00000477537 TRBV7-7A0A0K0K1E9 115 aa7.23□□□□□ -1.25
HLA-DMB-260ENST00000477537 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
HLA-DMB-260ENST00000477537 CASC10Q5T4H9 136 aa7.23□□□□□ -1.25
HLA-DMB-260ENST00000477537 USP17L23D6RBM5 183 aa7.23□□□□□ -1.25
HLA-DMB-260ENST00000477537 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
HLA-DMB-260ENST00000477537 DNAH7Q8WXX0 4024 aa7.22□□□□□ -1.25
HLA-DMB-260ENST00000477537 COX7BP24311 80 aa7.22□□□□□ -1.25
HLA-DMB-260ENST00000477537 RMI2Q96E14 147 aa7.22□□□□□ -1.25
HLA-DMB-260ENST00000477537 ANAPC13Q9BS18 74 aa7.22□□□□□ -1.25
HLA-DMB-260ENST00000477537 CSMD3Q7Z407 3707 aa7.22□□□□□ -1.25
HLA-DMB-260ENST00000477537 NDUFV3P56181 108 aaKnown RBP7.21□□□□□ -1.25
HLA-DMB-260ENST00000477537 UPK3BQ9BT76 320 aa7.21□□□□□ -1.25
HLA-DMB-260ENST00000477537 CCKP06307 115 aa7.21□□□□□ -1.26
HLA-DMB-260ENST00000477537 Q6ZQY7 126 aa7.21□□□□□ -1.26
HLA-DMB-260ENST00000477537 TRBV7-6A0A0J9YX20 115 aa7.2□□□□□ -1.26
HLA-DMB-260ENST00000477537 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
HLA-DMB-260ENST00000477537 LYSTQ99698 3801 aa7.19□□□□□ -1.26
HLA-DMB-260ENST00000477537 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
HLA-DMB-260ENST00000477537 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
HLA-DMB-260ENST00000477537 IMUPQ9GZP8 106 aa7.19□□□□□ -1.26
HLA-DMB-260ENST00000477537 LAMTOR3Q9UHA4 124 aa7.19□□□□□ -1.26
HLA-DMB-260ENST00000477537 DNAH1Q9P2D7 4330 aa7.19□□□□□ -1.26
HLA-DMB-260ENST00000477537 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
HLA-DMB-260ENST00000477537 SERTAD4-AS1Q5TG53 156 aa7.18□□□□□ -1.26
HLA-DMB-260ENST00000477537 NKAPP1Q8N9T2 125 aa7.18□□□□□ -1.26
HLA-DMB-260ENST00000477537 NHLRC4P0CG21 123 aaPredicted RBP7.17□□□□□ -1.26
HLA-DMB-260ENST00000477537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.17□□□□□ -1.26
HLA-DMB-260ENST00000477537 H3BQ85 93 aa7.17□□□□□ -1.26
HLA-DMB-260ENST00000477537 RBM3P98179 157 aaKnown RBP7.17□□□□□ -1.26
HLA-DMB-260ENST00000477537 LCE2BO14633 110 aa7.16□□□□□ -1.26
HLA-DMB-260ENST00000477537 C7orf33Q8WU49 177 aa7.16□□□□□ -1.26
HLA-DMB-260ENST00000477537 STARD9Q9P2P6 4700 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms