RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 A0A0U1RRA0 63 aa11.2□□□□□ -0.62
SREBF1-211ENST00000476994 C9orf129Q5T035 196 aaKnown RBP11.2□□□□□ -0.62
SREBF1-211ENST00000476994 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
SREBF1-211ENST00000476994 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
SREBF1-211ENST00000476994 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
SREBF1-211ENST00000476994 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 LINC00158P58513 81 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 GAGE2BQ13066 116 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 C12orf57Q99622 126 aa11.19□□□□□ -0.62
SREBF1-211ENST00000476994 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
SREBF1-211ENST00000476994 SLC25A34Q6PIV7 304 aa11.18□□□□□ -0.62
SREBF1-211ENST00000476994 C2orf91Q6ZV80 131 aa11.18□□□□□ -0.62
SREBF1-211ENST00000476994 DAND5Q8N907 189 aa11.18□□□□□ -0.62
SREBF1-211ENST00000476994 SND1-IT1Q9HBX3 110 aa11.18□□□□□ -0.62
SREBF1-211ENST00000476994 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
SREBF1-211ENST00000476994 IGKV2-24A0A0C4DH68 120 aa11.17□□□□□ -0.62
SREBF1-211ENST00000476994 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
SREBF1-211ENST00000476994 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
SREBF1-211ENST00000476994 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
SREBF1-211ENST00000476994 LOC107984156A0A0G2JMH3 177 aa11.16□□□□□ -0.62
SREBF1-211ENST00000476994 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
SREBF1-211ENST00000476994 SOSTDC1Q6X4U4 206 aa11.16□□□□□ -0.62
SREBF1-211ENST00000476994 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
SREBF1-211ENST00000476994 ARL17AQ8IVW1 177 aa11.16□□□□□ -0.62
SREBF1-211ENST00000476994 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
SREBF1-211ENST00000476994 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
SREBF1-211ENST00000476994 TMEM238C9JI98 176 aa11.14□□□□□ -0.63
SREBF1-211ENST00000476994 Q8NDZ9 215 aa11.14□□□□□ -0.63
SREBF1-211ENST00000476994 SPANXB1Q9NS25 103 aaPredicted RBP11.14□□□□□ -0.63
SREBF1-211ENST00000476994 HIGD1BQ9P298 99 aa11.14□□□□□ -0.63
SREBF1-211ENST00000476994 PRO1933Q9H354 126 aa11.13□□□□□ -0.63
SREBF1-211ENST00000476994 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
SREBF1-211ENST00000476994 A0A1W2PNN7 141 aa11.12□□□□□ -0.63
SREBF1-211ENST00000476994 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
SREBF1-211ENST00000476994 UQCR10Q9UDW1 63 aa11.12□□□□□ -0.63
SREBF1-211ENST00000476994 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
SREBF1-211ENST00000476994 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
SREBF1-211ENST00000476994 PLAC8Q9NZF1 115 aa11.11□□□□□ -0.63
SREBF1-211ENST00000476994 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
SREBF1-211ENST00000476994 A0A087WYN8 130 aa11.1□□□□□ -0.63
SREBF1-211ENST00000476994 Q6ZVH6 145 aa11.1□□□□□ -0.63
SREBF1-211ENST00000476994 SCXQ7RTU7 201 aa11.1□□□□□ -0.63
SREBF1-211ENST00000476994 PPDPFQ9H3Y8 114 aa11.1□□□□□ -0.63
SREBF1-211ENST00000476994 NPC2P61916 151 aa11.09□□□□□ -0.63
SREBF1-211ENST00000476994 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
SREBF1-211ENST00000476994 IGLV5-37A0A075B6J1 123 aa11.08□□□□□ -0.64
SREBF1-211ENST00000476994 KRTAP29-1A8MX34 341 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-211ENST00000476994 VPREB1P12018 145 aa11.08□□□□□ -0.64
SREBF1-211ENST00000476994 IFITM1P13164 125 aa11.07□□□□□ -0.64
SREBF1-211ENST00000476994 CIRBP-AS1Q8TBR5 109 aa11.07□□□□□ -0.64
SREBF1-211ENST00000476994 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-211ENST00000476994 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
SREBF1-211ENST00000476994 NDUFC2O95298 119 aa11.04□□□□□ -0.64
SREBF1-211ENST00000476994 SRSF9Q13242 221 aaKnown RBP eCLIP11.04□□□□□ -0.64
SREBF1-211ENST00000476994 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
SREBF1-211ENST00000476994 TAL2Q16559 108 aa11.02□□□□□ -0.65
SREBF1-211ENST00000476994 HIST1H4GQ99525 98 aa11.02□□□□□ -0.65
SREBF1-211ENST00000476994 C22orf24Q9Y442 160 aa11.02□□□□□ -0.65
SREBF1-211ENST00000476994 TSTD3H0UI37 97 aa11.01□□□□□ -0.65
SREBF1-211ENST00000476994 M0QXV9 152 aa11.01□□□□□ -0.65
SREBF1-211ENST00000476994 PRR3P79522 188 aaKnown RBP11.01□□□□□ -0.65
SREBF1-211ENST00000476994 RPL24P83731 157 aaKnown RBP11.01□□□□□ -0.65
SREBF1-211ENST00000476994 DPH3Q96FX2 82 aa11.01□□□□□ -0.65
SREBF1-211ENST00000476994 IGKV2-28A0A075B6P5 120 aa11□□□□□ -0.65
SREBF1-211ENST00000476994 IGKV2D-28P01615 120 aa11□□□□□ -0.65
SREBF1-211ENST00000476994 PHF5AQ7RTV0 110 aaKnown RBP11□□□□□ -0.65
SREBF1-211ENST00000476994 COPS9Q8WXC6 57 aa11□□□□□ -0.65
SREBF1-211ENST00000476994 OXTP01178 125 aa10.99□□□□□ -0.65
SREBF1-211ENST00000476994 HSD52Q0P140 79 aa10.99□□□□□ -0.65
SREBF1-211ENST00000476994 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
SREBF1-211ENST00000476994 C7orf33Q8WU49 177 aa10.99□□□□□ -0.65
SREBF1-211ENST00000476994 TRBV10-2A0A0K0K1G8 114 aa10.98□□□□□ -0.65
SREBF1-211ENST00000476994 A4D1N5 150 aa10.98□□□□□ -0.65
SREBF1-211ENST00000476994 CEND1Q8N111 149 aa10.98□□□□□ -0.65
SREBF1-211ENST00000476994 NCR3O14931 201 aa10.97□□□□□ -0.65
SREBF1-211ENST00000476994 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
SREBF1-211ENST00000476994 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
SREBF1-211ENST00000476994 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
SREBF1-211ENST00000476994 LINC00167Q96N53 147 aa10.97□□□□□ -0.65
SREBF1-211ENST00000476994 M0R378 163 aa10.96□□□□□ -0.65
SREBF1-211ENST00000476994 FXYD2P54710 66 aa10.96□□□□□ -0.65
SREBF1-211ENST00000476994 LINC00337Q8N6G1 96 aa10.96□□□□□ -0.65
SREBF1-211ENST00000476994 CTAG1AP78358 180 aa10.94□□□□□ -0.66
SREBF1-211ENST00000476994 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
SREBF1-211ENST00000476994 IGLV6-57P01721 117 aa10.93□□□□□ -0.66
SREBF1-211ENST00000476994 DDTP30046 118 aa10.93□□□□□ -0.66
SREBF1-211ENST00000476994 LBHQ53QV2 105 aaPredicted RBP10.93□□□□□ -0.66
SREBF1-211ENST00000476994 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
SREBF1-211ENST00000476994 IGLV1-50A0A075B6I6 118 aa10.92□□□□□ -0.66
SREBF1-211ENST00000476994 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
SREBF1-211ENST00000476994 KRTAP10-4P60372 401 aaPredicted RBP10.92□□□□□ -0.66
SREBF1-211ENST00000476994 RPL37AP8A6NKH3 93 aa10.9□□□□□ -0.66
SREBF1-211ENST00000476994 CFC1BP0CG36 223 aa10.9□□□□□ -0.66
SREBF1-211ENST00000476994 CFC1P0CG37 223 aa10.9□□□□□ -0.66
SREBF1-211ENST00000476994 BVES-AS1Q5T3Y7 98 aa10.9□□□□□ -0.66
SREBF1-211ENST00000476994 LRP1Q07954 4544 aaKnown RBP10.89□□□□□ -0.67
SREBF1-211ENST00000476994 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms