RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
HLA-DPA1-246ENST00000476642 HINT1P49773 126 aaPredicted RBP8.37□□□□□ -1.07
HLA-DPA1-246ENST00000476642 C9orf116Q5BN46 136 aaPredicted RBP8.37□□□□□ -1.07
HLA-DPA1-246ENST00000476642 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
HLA-DPA1-246ENST00000476642 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
HLA-DPA1-246ENST00000476642 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
HLA-DPA1-246ENST00000476642 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
HLA-DPA1-246ENST00000476642 NMUP48645 174 aa8.36□□□□□ -1.07
HLA-DPA1-246ENST00000476642 VAMP3Q15836 100 aa8.36□□□□□ -1.07
HLA-DPA1-246ENST00000476642 ERG28Q9UKR5 140 aa8.36□□□□□ -1.07
HLA-DPA1-246ENST00000476642 E9PLD3 99 aa8.35□□□□□ -1.07
HLA-DPA1-246ENST00000476642 J3QQQ9 107 aa8.35□□□□□ -1.07
HLA-DPA1-246ENST00000476642 LGALS3P17931 250 aaKnown RBP8.35□□□□□ -1.07
HLA-DPA1-246ENST00000476642 LINC00528Q8N1L1 170 aa8.35□□□□□ -1.07
HLA-DPA1-246ENST00000476642 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
HLA-DPA1-246ENST00000476642 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
HLA-DPA1-246ENST00000476642 K7ERU9 68 aa8.34□□□□□ -1.07
HLA-DPA1-246ENST00000476642 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
HLA-DPA1-246ENST00000476642 PFN2P35080 140 aa8.33□□□□□ -1.08
HLA-DPA1-246ENST00000476642 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
HLA-DPA1-246ENST00000476642 J3QL48 77 aa8.32□□□□□ -1.08
HLA-DPA1-246ENST00000476642 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
HLA-DPA1-246ENST00000476642 HERC1Q15751 4861 aa8.32□□□□□ -1.08
HLA-DPA1-246ENST00000476642 A0A1W2PNN7 141 aa8.31□□□□□ -1.08
HLA-DPA1-246ENST00000476642 LINC00158P58513 81 aa8.31□□□□□ -1.08
HLA-DPA1-246ENST00000476642 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
HLA-DPA1-246ENST00000476642 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
HLA-DPA1-246ENST00000476642 GTF2H5Q6ZYL4 71 aa8.31□□□□□ -1.08
HLA-DPA1-246ENST00000476642 ATOH7Q8N100 152 aa8.31□□□□□ -1.08
HLA-DPA1-246ENST00000476642 TAX1BP3O14907 124 aa8.3□□□□□ -1.08
HLA-DPA1-246ENST00000476642 RPL37AP61513 92 aaKnown RBP8.3□□□□□ -1.08
HLA-DPA1-246ENST00000476642 VPS25Q9BRG1 176 aa8.3□□□□□ -1.08
HLA-DPA1-246ENST00000476642 XAGE1AQ9HD64 81 aa8.3□□□□□ -1.08
HLA-DPA1-246ENST00000476642 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
HLA-DPA1-246ENST00000476642 A6NDN8 102 aa8.29□□□□□ -1.08
HLA-DPA1-246ENST00000476642 FAM19A5Q7Z5A7 132 aaPredicted RBP8.29□□□□□ -1.08
HLA-DPA1-246ENST00000476642 COX8AP10176 69 aa8.28□□□□□ -1.08
HLA-DPA1-246ENST00000476642 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
HLA-DPA1-246ENST00000476642 RPL24P83731 157 aaKnown RBP8.28□□□□□ -1.08
HLA-DPA1-246ENST00000476642 OCIAD2Q56VL3 154 aa8.28□□□□□ -1.08
HLA-DPA1-246ENST00000476642 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
HLA-DPA1-246ENST00000476642 TP73-AS1Q9UF72 201 aa8.28□□□□□ -1.08
HLA-DPA1-246ENST00000476642 SRRM2Q9UQ35 2752 aaKnown RBP8.27□□□□□ -1.08
HLA-DPA1-246ENST00000476642 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
HLA-DPA1-246ENST00000476642 M0QXV9 152 aa8.27□□□□□ -1.09
HLA-DPA1-246ENST00000476642 SMIM13P0DJ93 91 aa8.27□□□□□ -1.09
HLA-DPA1-246ENST00000476642 NKAPP1Q8N9T2 125 aa8.26□□□□□ -1.09
HLA-DPA1-246ENST00000476642 FAT1Q14517 4588 aa8.25□□□□□ -1.09
HLA-DPA1-246ENST00000476642 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
HLA-DPA1-246ENST00000476642 UBE2BP63146 152 aa8.25□□□□□ -1.09
HLA-DPA1-246ENST00000476642 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
HLA-DPA1-246ENST00000476642 PHF5AQ7RTV0 110 aaKnown RBP8.25□□□□□ -1.09
HLA-DPA1-246ENST00000476642 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
HLA-DPA1-246ENST00000476642 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 GAGE10A6NGK3 116 aa8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 HSD52Q0P140 79 aa8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 MRPL55Q7Z7F7 128 aaKnown RBP8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 MIR7-3HGQ8N6C7 128 aa8.24□□□□□ -1.09
HLA-DPA1-246ENST00000476642 A0A0J9YXY3 114 aa8.23□□□□□ -1.09
HLA-DPA1-246ENST00000476642 SERTAD4-AS1Q5TG53 156 aa8.23□□□□□ -1.09
HLA-DPA1-246ENST00000476642 IGKV2D-26A0A0A0MRZ7 120 aa8.22□□□□□ -1.09
HLA-DPA1-246ENST00000476642 C9orf118A6NHY6 69 aa8.22□□□□□ -1.09
HLA-DPA1-246ENST00000476642 TIMM17BO60830 172 aa8.22□□□□□ -1.09
HLA-DPA1-246ENST00000476642 PRR3P79522 188 aaKnown RBP8.21□□□□□ -1.1
HLA-DPA1-246ENST00000476642 SCGB1D4Q6XE38 83 aa8.21□□□□□ -1.1
HLA-DPA1-246ENST00000476642 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
HLA-DPA1-246ENST00000476642 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 K7EP34 96 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 Q6ZVH6 145 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
HLA-DPA1-246ENST00000476642 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
HLA-DPA1-246ENST00000476642 VPREB1P12018 145 aa8.19□□□□□ -1.1
HLA-DPA1-246ENST00000476642 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
HLA-DPA1-246ENST00000476642 C2orf91Q6ZV80 131 aa8.19□□□□□ -1.1
HLA-DPA1-246ENST00000476642 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
HLA-DPA1-246ENST00000476642 C1orf137Q5JT78 98 aa8.18□□□□□ -1.1
HLA-DPA1-246ENST00000476642 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
HLA-DPA1-246ENST00000476642 M0R378 163 aa8.17□□□□□ -1.1
HLA-DPA1-246ENST00000476642 NDUFC2O95298 119 aa8.17□□□□□ -1.1
HLA-DPA1-246ENST00000476642 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
HLA-DPA1-246ENST00000476642 DAND5Q8N907 189 aa8.17□□□□□ -1.1
HLA-DPA1-246ENST00000476642 HIGD1BQ9P298 99 aa8.17□□□□□ -1.1
HLA-DPA1-246ENST00000476642 J3QR89 54 aa8.16□□□□□ -1.1
HLA-DPA1-246ENST00000476642 FABP2P12104 132 aa8.16□□□□□ -1.1
HLA-DPA1-246ENST00000476642 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
HLA-DPA1-246ENST00000476642 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.1
HLA-DPA1-246ENST00000476642 SPINK6Q6UWN8 80 aa8.15□□□□□ -1.1
HLA-DPA1-246ENST00000476642 PCP2Q8IVA1 136 aa8.15□□□□□ -1.1
HLA-DPA1-246ENST00000476642 IGLV1-50A0A075B6I6 118 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 A0A1W2PPM0 123 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 RPL37AP8A6NKH3 93 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 IFITM1P13164 125 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 ADAMTSL4-AS1Q5T5F5 129 aa8.14□□□□□ -1.11
HLA-DPA1-246ENST00000476642 LITAFQ99732 161 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms