RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 A8MTW9 85 aa7.09□□□□□ -1.27
APTX-216ENST00000472896 KHDC1LQ5JSQ8 128 aa7.09□□□□□ -1.27
APTX-216ENST00000472896 Q6ZSN1 163 aa7.09□□□□□ -1.27
APTX-216ENST00000472896 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.27
APTX-216ENST00000472896 TMEM256-PLSCR3K7ERE1 68 aa7.08□□□□□ -1.28
APTX-216ENST00000472896 RPL36AP83881 106 aaKnown RBP7.08□□□□□ -1.28
APTX-216ENST00000472896 COX7B2Q8TF08 81 aa7.08□□□□□ -1.28
APTX-216ENST00000472896 RPL36ALQ969Q0 106 aaKnown RBP7.08□□□□□ -1.28
APTX-216ENST00000472896 IBA57-AS1B1ANH7 110 aa7.08□□□□□ -1.28
APTX-216ENST00000472896 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
APTX-216ENST00000472896 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
APTX-216ENST00000472896 J3QL48 77 aa7.07□□□□□ -1.28
APTX-216ENST00000472896 SS18Q15532 418 aa7.07□□□□□ -1.28
APTX-216ENST00000472896 ENHOQ6UWT2 76 aa7.07□□□□□ -1.28
APTX-216ENST00000472896 CDC42SE2Q9NRR3 84 aa7.07□□□□□ -1.28
APTX-216ENST00000472896 FAM19A1Q7Z5A9 133 aa7.06□□□□□ -1.28
APTX-216ENST00000472896 NACAE9PAV3 2078 aa7.06□□□□□ -1.28
APTX-216ENST00000472896 TRBV10-1A0A0K0K1A3 114 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 CCL18P55774 89 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 LINC00158P58513 81 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 CFHR3Q02985 330 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 HUWE1Q7Z6Z7 4374 aaKnown RBP7.05□□□□□ -1.28
APTX-216ENST00000472896 DNAH7Q8WXX0 4024 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 TRBV6-4A0A1B0GX49 114 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 K7EQD1 137 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
APTX-216ENST00000472896 EDN2P20800 178 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 Q9UF83 564 aa7.05□□□□□ -1.28
APTX-216ENST00000472896 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
APTX-216ENST00000472896 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
APTX-216ENST00000472896 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
APTX-216ENST00000472896 V9GYY9 64 aa7.03□□□□□ -1.28
APTX-216ENST00000472896 PAX4O43316 350 aa7.03□□□□□ -1.28
APTX-216ENST00000472896 SLPIP03973 132 aa7.03□□□□□ -1.28
APTX-216ENST00000472896 Q8N814 137 aa7.03□□□□□ -1.28
APTX-216ENST00000472896 C11orf72Q8NBR9 251 aa7.03□□□□□ -1.28
APTX-216ENST00000472896 LOC110117498A0A087WWA1 95 aa7.02□□□□□ -1.29
APTX-216ENST00000472896 CCL24O00175 119 aa7.02□□□□□ -1.29
APTX-216ENST00000472896 HTN1P15515 57 aa7.02□□□□□ -1.29
APTX-216ENST00000472896 C1orf195Q5TG92 126 aa7.02□□□□□ -1.29
APTX-216ENST00000472896 LYSTQ99698 3801 aa7.01□□□□□ -1.29
APTX-216ENST00000472896 TRBV7-6A0A0J9YX20 115 aa7.01□□□□□ -1.29
APTX-216ENST00000472896 H3BQ85 93 aa7.01□□□□□ -1.29
APTX-216ENST00000472896 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
APTX-216ENST00000472896 F8WEM9 126 aa7□□□□□ -1.29
APTX-216ENST00000472896 UBE2L6O14933 153 aa7□□□□□ -1.29
APTX-216ENST00000472896 PDE6GP18545 87 aa7□□□□□ -1.29
APTX-216ENST00000472896 CXCL6P80162 114 aa7□□□□□ -1.29
APTX-216ENST00000472896 DEFB136Q30KP8 78 aa7□□□□□ -1.29
APTX-216ENST00000472896 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
APTX-216ENST00000472896 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
APTX-216ENST00000472896 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
APTX-216ENST00000472896 ERC2-IT1O76042 136 aa7□□□□□ -1.29
APTX-216ENST00000472896 RBM3P98179 157 aaKnown RBP7□□□□□ -1.29
APTX-216ENST00000472896 NTM-AS1Q6ZSK4 140 aa7□□□□□ -1.29
APTX-216ENST00000472896 SORL1Q92673 2214 aa6.99□□□□□ -1.29
APTX-216ENST00000472896 INSP01308 110 aa6.98□□□□□ -1.29
APTX-216ENST00000472896 Q6ZQT0 140 aa6.98□□□□□ -1.29
APTX-216ENST00000472896 RMI2Q96E14 147 aa6.98□□□□□ -1.29
APTX-216ENST00000472896 TOMM7Q9P0U1 55 aa6.98□□□□□ -1.29
APTX-216ENST00000472896 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
APTX-216ENST00000472896 DEFB131AP59861 70 aa6.97□□□□□ -1.29
APTX-216ENST00000472896 A0A087WZ39 114 aa6.97□□□□□ -1.29
APTX-216ENST00000472896 C6orf223Q8N319 242 aa6.97□□□□□ -1.29
APTX-216ENST00000472896 CSMD3Q7Z407 3707 aa6.96□□□□□ -1.3
APTX-216ENST00000472896 IL17DQ8TAD2 202 aa6.96□□□□□ -1.3
APTX-216ENST00000472896 BRK1Q8WUW1 75 aa6.96□□□□□ -1.3
APTX-216ENST00000472896 LAMTOR3Q9UHA4 124 aa6.96□□□□□ -1.3
APTX-216ENST00000472896 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.3
APTX-216ENST00000472896 IGHV3OR16-9A0A0B4J2B5 98 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 MIFP14174 115 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 TM2D3Q9BRN9 247 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 SNURFQ9Y675 71 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 TRBV7-4A0A0J9YYF1 115 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 Q6ZVQ6 151 aa6.95□□□□□ -1.3
APTX-216ENST00000472896 NANOS2P60321 138 aaKnown RBP6.93□□□□□ -1.3
APTX-216ENST00000472896 HAMPP81172 84 aa6.93□□□□□ -1.3
APTX-216ENST00000472896 PRM2P04554 102 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 LINC00575Q6W349 94 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 TRGV1A0A0A0MS02 117 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 Q8IZM0 81 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 C4orf3Q8WVX3 66 aa6.92□□□□□ -1.3
APTX-216ENST00000472896 COX17Q14061 63 aa6.91□□□□□ -1.3
APTX-216ENST00000472896 Q6ZTI0 123 aa6.91□□□□□ -1.3
APTX-216ENST00000472896 DYNLRB2Q8TF09 96 aa6.91□□□□□ -1.3
APTX-216ENST00000472896 NREPQ16612 68 aa6.9□□□□□ -1.3
APTX-216ENST00000472896 Q8N3U1 123 aa6.9□□□□□ -1.3
APTX-216ENST00000472896 UBE2E2Q96LR5 201 aa6.9□□□□□ -1.3
APTX-216ENST00000472896 MAP6D1Q9H9H5 199 aa6.9□□□□□ -1.3
APTX-216ENST00000472896 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
APTX-216ENST00000472896 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.31
APTX-216ENST00000472896 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.31
APTX-216ENST00000472896 PCLOQ9Y6V0 5065 aa6.9□□□□□ -1.31
APTX-216ENST00000472896 HERC2O95714 4834 aa6.89□□□□□ -1.31
APTX-216ENST00000472896 PLAC8L1A1L4L8 177 aa6.89□□□□□ -1.31
APTX-216ENST00000472896 ESRGQ1W209 222 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms