RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 DAND5Q8N907 189 aa6.61□□□□□ -1.35
SMC1A-206ENST00000470241 LITAFQ99732 161 aa6.61□□□□□ -1.35
SMC1A-206ENST00000470241 PLA2G2DQ9UNK4 145 aa6.61□□□□□ -1.35
SMC1A-206ENST00000470241 Q8N1X5 172 aa6.6□□□□□ -1.35
SMC1A-206ENST00000470241 Q8NDZ9 215 aa6.6□□□□□ -1.35
SMC1A-206ENST00000470241 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
SMC1A-206ENST00000470241 M0QXV9 152 aa6.59□□□□□ -1.35
SMC1A-206ENST00000470241 TIMM17BO60830 172 aa6.59□□□□□ -1.35
SMC1A-206ENST00000470241 PAM16Q9Y3D7 125 aa6.59□□□□□ -1.35
SMC1A-206ENST00000470241 C22orf24Q9Y442 160 aa6.59□□□□□ -1.35
SMC1A-206ENST00000470241 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 VPREB1P12018 145 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 VAMP8Q9BV40 100 aa6.58□□□□□ -1.36
SMC1A-206ENST00000470241 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-206ENST00000470241 COX8AP10176 69 aa6.57□□□□□ -1.36
SMC1A-206ENST00000470241 Q5VSD8 79 aa6.57□□□□□ -1.36
SMC1A-206ENST00000470241 KRTAP11-1Q8IUC1 163 aa6.57□□□□□ -1.36
SMC1A-206ENST00000470241 BOD1L2Q8IYS8 172 aa6.57□□□□□ -1.36
SMC1A-206ENST00000470241 C7orf33Q8WU49 177 aa6.57□□□□□ -1.36
SMC1A-206ENST00000470241 TP73-AS1Q9UF72 201 aa6.57□□□□□ -1.36
SMC1A-206ENST00000470241 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
SMC1A-206ENST00000470241 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-206ENST00000470241 NPC2P61916 151 aa6.56□□□□□ -1.36
SMC1A-206ENST00000470241 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
SMC1A-206ENST00000470241 MRPL55Q7Z7F7 128 aaKnown RBP6.56□□□□□ -1.36
SMC1A-206ENST00000470241 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
SMC1A-206ENST00000470241 LOC105371267A0A1B0GV96 52 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 TMEM238C9JI98 176 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 DLEU1O43261 78 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
SMC1A-206ENST00000470241 LBHQ53QV2 105 aaPredicted RBP6.55□□□□□ -1.36
SMC1A-206ENST00000470241 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 LINC00308Q8TCZ7 52 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 C14orf144Q96I85 54 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 SPANXDQ9BXN6 97 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 SPANXCQ9NY87 97 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
SMC1A-206ENST00000470241 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
SMC1A-206ENST00000470241 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
SMC1A-206ENST00000470241 MIEN1Q9BRT3 115 aa6.54□□□□□ -1.36
SMC1A-206ENST00000470241 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
SMC1A-206ENST00000470241 UBE2BP63146 152 aa6.53□□□□□ -1.36
SMC1A-206ENST00000470241 PSORS1C2Q9UIG4 136 aa6.53□□□□□ -1.36
SMC1A-206ENST00000470241 RPL37AP8A6NKH3 93 aa6.52□□□□□ -1.37
SMC1A-206ENST00000470241 M0R378 163 aa6.52□□□□□ -1.37
SMC1A-206ENST00000470241 NCR3O14931 201 aa6.52□□□□□ -1.37
SMC1A-206ENST00000470241 NDUFC2O95298 119 aa6.52□□□□□ -1.37
SMC1A-206ENST00000470241 Q6ZVH6 145 aa6.52□□□□□ -1.37
SMC1A-206ENST00000470241 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-206ENST00000470241 IFITM1P13164 125 aa6.51□□□□□ -1.37
SMC1A-206ENST00000470241 SLC25A34Q6PIV7 304 aa6.51□□□□□ -1.37
SMC1A-206ENST00000470241 MUSTN1Q8IVN3 82 aa6.51□□□□□ -1.37
SMC1A-206ENST00000470241 ABCA13Q86UQ4 5058 aa6.51□□□□□ -1.37
SMC1A-206ENST00000470241 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 IGKV2-28A0A075B6P5 120 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 IGKV2D-28P01615 120 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 SMIM6P0DI80 62 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 HNRNPA3P51991 378 aaKnown RBP6.5□□□□□ -1.37
SMC1A-206ENST00000470241 C1orf137Q5JT78 98 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 C2orf91Q6ZV80 131 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
SMC1A-206ENST00000470241 S100A12P80511 92 aa6.49□□□□□ -1.37
SMC1A-206ENST00000470241 SRSF9Q13242 221 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMC1A-206ENST00000470241 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
SMC1A-206ENST00000470241 TRBV10-3A0A0K0K1G6 114 aa6.48□□□□□ -1.37
SMC1A-206ENST00000470241 COPS9Q8WXC6 57 aa6.48□□□□□ -1.37
SMC1A-206ENST00000470241 IGLV7-43P04211 117 aa6.47□□□□□ -1.37
SMC1A-206ENST00000470241 PKHD1L1Q86WI1 4243 aa6.47□□□□□ -1.37
SMC1A-206ENST00000470241 BCE1O60756 84 aa6.46□□□□□ -1.38
SMC1A-206ENST00000470241 IGLV6-57P01721 117 aa6.46□□□□□ -1.38
SMC1A-206ENST00000470241 DDTP30046 118 aa6.46□□□□□ -1.38
SMC1A-206ENST00000470241 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
SMC1A-206ENST00000470241 TMEM126AQ9H061 195 aa6.46□□□□□ -1.38
SMC1A-206ENST00000470241 KCNQ1DNQ9H478 68 aa6.46□□□□□ -1.38
SMC1A-206ENST00000470241 PRYO14603 147 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 INAFM2P0DMQ5 153 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 S100A7L2Q5SY68 101 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 REG3GQ6UW15 175 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 LINC00518Q8N0U6 118 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 LINC00337Q8N6G1 96 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 UQCR10Q9UDW1 63 aa6.45□□□□□ -1.38
SMC1A-206ENST00000470241 A4D1N5 150 aa6.44□□□□□ -1.38
SMC1A-206ENST00000470241 SPRR1AP35321 89 aa6.44□□□□□ -1.38
SMC1A-206ENST00000470241 PRO1933Q9H354 126 aa6.44□□□□□ -1.38
SMC1A-206ENST00000470241 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-206ENST00000470241 TAL2Q16559 108 aa6.43□□□□□ -1.38
SMC1A-206ENST00000470241 KRTAP13-1Q8IUC0 172 aa6.43□□□□□ -1.38
SMC1A-206ENST00000470241 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
SMC1A-206ENST00000470241 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
SMC1A-206ENST00000470241 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
SMC1A-206ENST00000470241 ZNF861PO60384 105 aa6.42□□□□□ -1.38
SMC1A-206ENST00000470241 SPINK6Q6UWN8 80 aa6.42□□□□□ -1.38
SMC1A-206ENST00000470241 C12orf57Q99622 126 aa6.42□□□□□ -1.38
SMC1A-206ENST00000470241 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms