RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.02
UBA3-209ENST00000466763 NDUFA12Q9UI09 145 aa8.71□□□□□ -1.02
UBA3-209ENST00000466763 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
UBA3-209ENST00000466763 J3QQQ9 107 aa8.7□□□□□ -1.02
UBA3-209ENST00000466763 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
UBA3-209ENST00000466763 M0QXV9 152 aa8.69□□□□□ -1.02
UBA3-209ENST00000466763 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
UBA3-209ENST00000466763 HERV-K104P63124 156 aa8.69□□□□□ -1.02
UBA3-209ENST00000466763 COX17Q14061 63 aa8.68□□□□□ -1.02
UBA3-209ENST00000466763 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
UBA3-209ENST00000466763 SMIM13P0DJ93 91 aa8.67□□□□□ -1.02
UBA3-209ENST00000466763 UBE2BP63146 152 aa8.67□□□□□ -1.02
UBA3-209ENST00000466763 FAT1Q14517 4588 aa8.67□□□□□ -1.02
UBA3-209ENST00000466763 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
UBA3-209ENST00000466763 E9PLD3 99 aa8.66□□□□□ -1.02
UBA3-209ENST00000466763 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
UBA3-209ENST00000466763 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
UBA3-209ENST00000466763 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
UBA3-209ENST00000466763 NMUP48645 174 aa8.65□□□□□ -1.02
UBA3-209ENST00000466763 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
UBA3-209ENST00000466763 C5orf52A6NGY3 159 aa8.64□□□□□ -1.03
UBA3-209ENST00000466763 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
UBA3-209ENST00000466763 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
UBA3-209ENST00000466763 AKR1D1P51857 326 aa8.63□□□□□ -1.03
UBA3-209ENST00000466763 PRR3P79522 188 aaKnown RBP8.63□□□□□ -1.03
UBA3-209ENST00000466763 LBHQ53QV2 105 aaPredicted RBP8.63□□□□□ -1.03
UBA3-209ENST00000466763 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
UBA3-209ENST00000466763 VPS13BQ7Z7G8 4022 aa8.62□□□□□ -1.03
UBA3-209ENST00000466763 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
UBA3-209ENST00000466763 PSORS1C2Q9UIG4 136 aa8.62□□□□□ -1.03
UBA3-209ENST00000466763 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
UBA3-209ENST00000466763 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
UBA3-209ENST00000466763 IGKV2D-26A0A0A0MRZ7 120 aa8.61□□□□□ -1.03
UBA3-209ENST00000466763 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
UBA3-209ENST00000466763 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
UBA3-209ENST00000466763 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
UBA3-209ENST00000466763 DAND5Q8N907 189 aa8.61□□□□□ -1.03
UBA3-209ENST00000466763 TMA7Q9Y2S6 64 aaKnown RBP8.61□□□□□ -1.03
UBA3-209ENST00000466763 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
UBA3-209ENST00000466763 SRRM2Q9UQ35 2752 aaKnown RBP8.6□□□□□ -1.03
UBA3-209ENST00000466763 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
UBA3-209ENST00000466763 SCGB1D1O95968 90 aa8.6□□□□□ -1.03
UBA3-209ENST00000466763 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
UBA3-209ENST00000466763 KRTAP11-1Q8IUC1 163 aa8.6□□□□□ -1.03
UBA3-209ENST00000466763 TTTY13Q9BZ97 58 aa8.6□□□□□ -1.03
UBA3-209ENST00000466763 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
UBA3-209ENST00000466763 RPL37AP8A6NKH3 93 aa8.59□□□□□ -1.03
UBA3-209ENST00000466763 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
UBA3-209ENST00000466763 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
UBA3-209ENST00000466763 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
UBA3-209ENST00000466763 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
UBA3-209ENST00000466763 IGLV5-37A0A075B6J1 123 aa8.58□□□□□ -1.04
UBA3-209ENST00000466763 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
UBA3-209ENST00000466763 VPREB1P12018 145 aa8.58□□□□□ -1.04
UBA3-209ENST00000466763 NPC2P61916 151 aa8.57□□□□□ -1.04
UBA3-209ENST00000466763 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
UBA3-209ENST00000466763 Q8NDZ9 215 aa8.56□□□□□ -1.04
UBA3-209ENST00000466763 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
UBA3-209ENST00000466763 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
UBA3-209ENST00000466763 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
UBA3-209ENST00000466763 NCR3O14931 201 aa8.54□□□□□ -1.04
UBA3-209ENST00000466763 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
UBA3-209ENST00000466763 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
UBA3-209ENST00000466763 PCLOQ9Y6V0 5065 aa8.54□□□□□ -1.04
UBA3-209ENST00000466763 M0R378 163 aa8.53□□□□□ -1.04
UBA3-209ENST00000466763 PCP2Q8IVA1 136 aa8.53□□□□□ -1.04
UBA3-209ENST00000466763 TIMM17BO60830 172 aa8.52□□□□□ -1.05
UBA3-209ENST00000466763 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
UBA3-209ENST00000466763 LCE1DQ5T752 114 aa8.51□□□□□ -1.05
UBA3-209ENST00000466763 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
UBA3-209ENST00000466763 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
UBA3-209ENST00000466763 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
UBA3-209ENST00000466763 LITAFQ99732 161 aa8.5□□□□□ -1.05
UBA3-209ENST00000466763 KRTAP4-7Q9BYR0 210 aa8.5□□□□□ -1.05
UBA3-209ENST00000466763 LOC107984156A0A0G2JMH3 177 aa8.49□□□□□ -1.05
UBA3-209ENST00000466763 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
UBA3-209ENST00000466763 BCE1O60756 84 aa8.49□□□□□ -1.05
UBA3-209ENST00000466763 ARL17AQ8IVW1 177 aa8.49□□□□□ -1.05
UBA3-209ENST00000466763 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
UBA3-209ENST00000466763 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
UBA3-209ENST00000466763 UBE2AP49459 152 aa8.48□□□□□ -1.05
UBA3-209ENST00000466763 REG3GQ6UW15 175 aa8.48□□□□□ -1.05
UBA3-209ENST00000466763 DIRC1Q969H9 104 aa8.48□□□□□ -1.05
UBA3-209ENST00000466763 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
UBA3-209ENST00000466763 ZNF861PO60384 105 aa8.46□□□□□ -1.06
UBA3-209ENST00000466763 OXTP01178 125 aa8.46□□□□□ -1.06
UBA3-209ENST00000466763 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
UBA3-209ENST00000466763 JOSD1Q15040 202 aaPredicted RBP8.46□□□□□ -1.06
UBA3-209ENST00000466763 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
UBA3-209ENST00000466763 FAM19A1Q7Z5A9 133 aa8.46□□□□□ -1.06
UBA3-209ENST00000466763 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
UBA3-209ENST00000466763 SPANXB1Q9NS25 103 aaPredicted RBP8.46□□□□□ -1.06
UBA3-209ENST00000466763 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
UBA3-209ENST00000466763 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
UBA3-209ENST00000466763 NDUFC2O95298 119 aa8.45□□□□□ -1.06
UBA3-209ENST00000466763 GHRHP01286 108 aa8.45□□□□□ -1.06
UBA3-209ENST00000466763 DDTP30046 118 aa8.45□□□□□ -1.06
UBA3-209ENST00000466763 S100A12P80511 92 aa8.45□□□□□ -1.06
UBA3-209ENST00000466763 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
UBA3-209ENST00000466763 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms