RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 Q6ZRU5 148 aa4.44□□□□□ -1.7
CLDN4-204ENST00000466411 DPH3Q96FX2 82 aa4.44□□□□□ -1.7
CLDN4-204ENST00000466411 MYMXA0A1B0GTQ4 84 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 SLPIP03973 132 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 KRTDAPP60985 99 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 RPL18AQ02543 176 aaKnown RBP4.43□□□□□ -1.7
CLDN4-204ENST00000466411 HIST3H2BBQ8N257 126 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
CLDN4-204ENST00000466411 HSBP1L1C9JCN9 74 aa4.42□□□□□ -1.7
CLDN4-204ENST00000466411 LEPROTO15243 131 aa4.42□□□□□ -1.7
CLDN4-204ENST00000466411 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
CLDN4-204ENST00000466411 LGALS3P17931 250 aaKnown RBP4.42□□□□□ -1.7
CLDN4-204ENST00000466411 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
CLDN4-204ENST00000466411 C6orf48Q9UBA6 75 aa4.42□□□□□ -1.7
CLDN4-204ENST00000466411 C5orf52A6NGY3 159 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 E9PLD3 99 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 J3QQQ9 107 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 MAJINQ3KP22 176 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 C2orf82Q6UX34 121 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 UNQ6190/PRO20217Q6UXQ8 127 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 LINC00526Q96FQ7 95 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 HIST1H2BLQ99880 126 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 PLAC8Q9NZF1 115 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 NDUFA12Q9UI09 145 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
CLDN4-204ENST00000466411 A0A096LNI7 61 aa4.4□□□□□ -1.71
CLDN4-204ENST00000466411 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.71
CLDN4-204ENST00000466411 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
CLDN4-204ENST00000466411 SCXQ7RTU7 201 aa4.4□□□□□ -1.71
CLDN4-204ENST00000466411 ZNF625Q96I27 306 aaPredicted RBP4.4□□□□□ -1.71
CLDN4-204ENST00000466411 ERG28Q9UKR5 140 aa4.4□□□□□ -1.71
CLDN4-204ENST00000466411 RPL24P83731 157 aaKnown RBP4.39□□□□□ -1.71
CLDN4-204ENST00000466411 LINC01620Q4KN68 170 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 LBHQ53QV2 105 aaPredicted RBP4.39□□□□□ -1.71
CLDN4-204ENST00000466411 MEIG1Q5JSS6 88 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 Q6ZRP5 223 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 STPG4Q8N801 248 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 CIRBP-AS1Q8TBR5 109 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 MIEN1Q9BRT3 115 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
CLDN4-204ENST00000466411 A0A087WYN8 130 aa4.38□□□□□ -1.71
CLDN4-204ENST00000466411 S100A12P80511 92 aa4.38□□□□□ -1.71
CLDN4-204ENST00000466411 CBY1Q9Y3M2 126 aa4.38□□□□□ -1.71
CLDN4-204ENST00000466411 LPAP08519 4548 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 TIMM17BO60830 172 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 LINC00158P58513 81 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 GAGE2EQ4V326 116 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 Q6ZVH6 145 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 NKAPP1Q8N9T2 125 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 PMCHL2Q9BQD1 86 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 GAGE2DQ9UEU5 116 aa4.37□□□□□ -1.71
CLDN4-204ENST00000466411 IGKV2D-26A0A0A0MRZ7 120 aa4.36□□□□□ -1.71
CLDN4-204ENST00000466411 A0A0J9YXY3 114 aa4.36□□□□□ -1.71
CLDN4-204ENST00000466411 CHTF8P0CG12 524 aa4.36□□□□□ -1.71
CLDN4-204ENST00000466411 PFN2P35080 140 aa4.36□□□□□ -1.71
CLDN4-204ENST00000466411 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
CLDN4-204ENST00000466411 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
CLDN4-204ENST00000466411 PPDPFQ9H3Y8 114 aa4.36□□□□□ -1.71
CLDN4-204ENST00000466411 IGLV5-37A0A075B6J1 123 aa4.35□□□□□ -1.71
CLDN4-204ENST00000466411 LOC107984156A0A0G2JMH3 177 aa4.35□□□□□ -1.71
CLDN4-204ENST00000466411 ZNF815PA8K554 130 aa4.35□□□□□ -1.71
CLDN4-204ENST00000466411 M0QXV9 152 aa4.35□□□□□ -1.71
CLDN4-204ENST00000466411 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
CLDN4-204ENST00000466411 ARL17AQ8IVW1 177 aa4.35□□□□□ -1.71
CLDN4-204ENST00000466411 SND1-IT1Q9HBX3 110 aa4.35□□□□□ -1.71
CLDN4-204ENST00000466411 NDUFC2O95298 119 aa4.34□□□□□ -1.71
CLDN4-204ENST00000466411 UBE2BP63146 152 aa4.34□□□□□ -1.71
CLDN4-204ENST00000466411 C9orf129Q5T035 196 aaKnown RBP4.34□□□□□ -1.71
CLDN4-204ENST00000466411 FAM19A5Q7Z5A7 132 aaPredicted RBP4.34□□□□□ -1.71
CLDN4-204ENST00000466411 MRPL55Q7Z7F7 128 aaKnown RBP4.34□□□□□ -1.71
CLDN4-204ENST00000466411 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
CLDN4-204ENST00000466411 KRTAP9-3Q9BYQ3 159 aa4.34□□□□□ -1.71
CLDN4-204ENST00000466411 XAGE1AQ9HD64 81 aa4.34□□□□□ -1.71
CLDN4-204ENST00000466411 TRBV10-2A0A0K0K1G8 114 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 PANO1I0J062 215 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 IFITM1P13164 125 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 TSPEAR-AS2P59090 65 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 JOSD1Q15040 202 aaPredicted RBP4.33□□□□□ -1.72
CLDN4-204ENST00000466411 MIR7-3HGQ8N6C7 128 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 VAMP8Q9BV40 100 aa4.33□□□□□ -1.72
CLDN4-204ENST00000466411 M0R378 163 aa4.32□□□□□ -1.72
CLDN4-204ENST00000466411 DLEU1O43261 78 aa4.32□□□□□ -1.72
CLDN4-204ENST00000466411 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
CLDN4-204ENST00000466411 LINC00518Q8N0U6 118 aa4.32□□□□□ -1.72
CLDN4-204ENST00000466411 SPANXDQ9BXN6 97 aa4.32□□□□□ -1.72
CLDN4-204ENST00000466411 SPANXB1Q9NS25 103 aaPredicted RBP4.32□□□□□ -1.72
CLDN4-204ENST00000466411 SPANXCQ9NY87 97 aa4.32□□□□□ -1.72
CLDN4-204ENST00000466411 C22orf24Q9Y442 160 aa4.32□□□□□ -1.72
CLDN4-204ENST00000466411 A0A1W2PNN7 141 aa4.31□□□□□ -1.72
CLDN4-204ENST00000466411 PRR3P79522 188 aaKnown RBP4.31□□□□□ -1.72
CLDN4-204ENST00000466411 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
CLDN4-204ENST00000466411 VPREB1P12018 145 aa4.3□□□□□ -1.72
CLDN4-204ENST00000466411 A0A0U1RRA0 63 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms